RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 HOXB1P14653 301 aaPredicted RBP7.05□□□□□ -1.28
PMS1-209ENST00000424059 MARVELD3Q96A59 401 aa7.03□□□□□ -1.28
PMS1-209ENST00000424059 TMEM92Q6UXU6 159 aa7.03□□□□□ -1.28
PMS1-209ENST00000424059 HS6ST3Q8IZP7 471 aa7.03□□□□□ -1.28
PMS1-209ENST00000424059 HS3ST6Q96QI5 342 aa7□□□□□ -1.29
PMS1-209ENST00000424059 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
PMS1-209ENST00000424059 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
PMS1-209ENST00000424059 DNAJC5Q9H3Z4 198 aa7□□□□□ -1.29
PMS1-209ENST00000424059 FAM205CA6NFA0 338 aa6.98□□□□□ -1.29
PMS1-209ENST00000424059 KIF3CO14782 793 aa6.98□□□□□ -1.29
PMS1-209ENST00000424059 RYDENQ9NUL5 291 aaKnown RBP6.98□□□□□ -1.29
PMS1-209ENST00000424059 ERBB3P21860 1342 aa6.96□□□□□ -1.3
PMS1-209ENST00000424059 TMC2Q8TDI7 906 aa6.95□□□□□ -1.3
PMS1-209ENST00000424059 POTEB3A0JP26 581 aa6.94□□□□□ -1.3
PMS1-209ENST00000424059 GPR153Q6NV75 609 aa6.94□□□□□ -1.3
PMS1-209ENST00000424059 POTEBQ6S5H4 581 aa6.94□□□□□ -1.3
PMS1-209ENST00000424059 C2orf72A6NCS6 295 aa6.93□□□□□ -1.3
PMS1-209ENST00000424059 SLC34A2O95436 690 aa6.93□□□□□ -1.3
PMS1-209ENST00000424059 CHGAP10645 457 aaKnown RBP6.93□□□□□ -1.3
PMS1-209ENST00000424059 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
PMS1-209ENST00000424059 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
PMS1-209ENST00000424059 PPP1R37O75864 691 aa6.9□□□□□ -1.3
PMS1-209ENST00000424059 ZNF687Q8N1G0 1237 aa6.9□□□□□ -1.3
PMS1-209ENST00000424059 VARS2Q5ST30 1063 aaKnown RBP6.89□□□□□ -1.31
PMS1-209ENST00000424059 ZNF316A6NFI3 1004 aaPredicted RBP6.89□□□□□ -1.31
PMS1-209ENST00000424059 ARSIQ5FYB1 569 aa6.89□□□□□ -1.31
PMS1-209ENST00000424059 PTGER2P43116 358 aa6.86□□□□□ -1.31
PMS1-209ENST00000424059 PCDHGA4Q9Y5G9 962 aa6.86□□□□□ -1.31
PMS1-209ENST00000424059 PSDA5PKW4 1024 aaPredicted RBP6.86□□□□□ -1.31
PMS1-209ENST00000424059 FOXK1P85037 733 aa6.86□□□□□ -1.31
PMS1-209ENST00000424059 GPHNQ9NQX3 736 aaPredicted RBP6.86□□□□□ -1.31
PMS1-209ENST00000424059 PBX2P40425 430 aa6.85□□□□□ -1.31
PMS1-209ENST00000424059 NKX1-1Q15270 411 aaPredicted RBP6.84□□□□□ -1.31
PMS1-209ENST00000424059 PTCD2Q8WV60 388 aaKnown RBP6.84□□□□□ -1.31
PMS1-209ENST00000424059 TBC1D12O60347 775 aa6.82□□□□□ -1.32
PMS1-209ENST00000424059 PLPP6Q8IY26 295 aa6.82□□□□□ -1.32
PMS1-209ENST00000424059 KHSRPQ92945 711 aaKnown RBP eCLIP6.82□□□□□ -1.328e-10■■□□□ 12.3
PMS1-209ENST00000424059 NUDT7P0C024 238 aa6.81□□□□□ -1.32
PMS1-209ENST00000424059 CRISPLD2Q9H0B8 497 aa6.8□□□□□ -1.32
PMS1-209ENST00000424059 LHX6Q9UPM6 363 aa6.79□□□□□ -1.32
PMS1-209ENST00000424059 DSG2Q14126 1118 aa6.79□□□□□ -1.32
PMS1-209ENST00000424059 KDM4FA0A1W2PPD8 638 aa6.78□□□□□ -1.32
PMS1-209ENST00000424059 GTPBP6O43824 516 aaPredicted RBP6.78□□□□□ -1.32
PMS1-209ENST00000424059 PDE4AP27815 886 aa6.77□□□□□ -1.32
PMS1-209ENST00000424059 LSM11P83369 360 aaKnown RBP eCLIP6.77□□□□□ -1.33
PMS1-209ENST00000424059 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
PMS1-209ENST00000424059 MYT1LQ9UL68 1186 aa6.76□□□□□ -1.33
PMS1-209ENST00000424059 PPP1R15BQ5SWA1 713 aa6.76□□□□□ -1.33
PMS1-209ENST00000424059 OXER1Q8TDS5 423 aa6.76□□□□□ -1.33
PMS1-209ENST00000424059 DCAF8L2P0C7V8 631 aa6.75□□□□□ -1.33
PMS1-209ENST00000424059 PPP4R3BQ5MIZ7 849 aa6.74□□□□□ -1.33
PMS1-209ENST00000424059 ARHGAP33O14559 1287 aa6.73□□□□□ -1.33
PMS1-209ENST00000424059 MFSD10Q14728 455 aa6.73□□□□□ -1.33
PMS1-209ENST00000424059 ANKRD13DQ6ZTN6 518 aa6.72□□□□□ -1.33
PMS1-209ENST00000424059 NCKAP5LQ9HCH0 1330 aa6.72□□□□□ -1.33
PMS1-209ENST00000424059 TK2O00142 265 aa6.71□□□□□ -1.33
PMS1-209ENST00000424059 AMER1Q5JTC6 1135 aaPredicted RBP6.71□□□□□ -1.33
PMS1-209ENST00000424059 DDX27Q96GQ7 796 aaKnown RBP6.71□□□□□ -1.34
PMS1-209ENST00000424059 KCNH8Q96L42 1107 aa6.71□□□□□ -1.34
PMS1-209ENST00000424059 POTEEQ6S8J3 1075 aa6.7□□□□□ -1.34
PMS1-209ENST00000424059 BBXQ8WY36 941 aaPredicted RBP6.69□□□□□ -1.34
PMS1-209ENST00000424059 LARP6Q9BRS8 491 aaKnown RBP6.68□□□□□ -1.34
PMS1-209ENST00000424059 ADGRD1Q6QNK2 874 aa6.67□□□□□ -1.34
PMS1-209ENST00000424059 UPF1Q92900 1129 aaKnown RBP eCLIP6.67□□□□□ -1.34
PMS1-209ENST00000424059 ANO8Q9HCE9 1232 aaPredicted RBP6.67□□□□□ -1.34
PMS1-209ENST00000424059 JPH4Q96JJ6 628 aa6.66□□□□□ -1.34
PMS1-209ENST00000424059 AXIN2Q9Y2T1 843 aa6.66□□□□□ -1.34
PMS1-209ENST00000424059 FOSBP53539 338 aa6.66□□□□□ -1.34
PMS1-209ENST00000424059 SLC4A5Q9BY07 1137 aa6.66□□□□□ -1.34
PMS1-209ENST00000424059 BCL2L12Q9HB09 334 aa6.65□□□□□ -1.35
PMS1-209ENST00000424059 EVI5O60447 810 aa6.64□□□□□ -1.35
PMS1-209ENST00000424059 ZNF454Q8N9F8 522 aa6.64□□□□□ -1.35
PMS1-209ENST00000424059 MAP3K9P80192 1104 aa6.63□□□□□ -1.35
PMS1-209ENST00000424059 DMRTA1Q5VZB9 504 aa6.63□□□□□ -1.35
PMS1-209ENST00000424059 HRO43593 1189 aa6.62□□□□□ -1.35
PMS1-209ENST00000424059 KCNK17Q96T54 332 aa6.62□□□□□ -1.35
PMS1-209ENST00000424059 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
PMS1-209ENST00000424059 PTPREP23469 700 aa6.62□□□□□ -1.35
PMS1-209ENST00000424059 PSEN2P49810 448 aa6.62□□□□□ -1.35
PMS1-209ENST00000424059 CAMK2BQ13554 666 aa6.62□□□□□ -1.35
PMS1-209ENST00000424059 CADPS2Q86UW7 1296 aa6.61□□□□□ -1.35
PMS1-209ENST00000424059 ZDHHC16Q969W1 377 aa6.61□□□□□ -1.35
PMS1-209ENST00000424059 HCSTQ9UBK5 93 aa6.61□□□□□ -1.35
PMS1-209ENST00000424059 STAC3Q96MF2 364 aa6.6□□□□□ -1.35
PMS1-209ENST00000424059 SPRYD3Q8NCJ5 442 aa6.6□□□□□ -1.35
PMS1-209ENST00000424059 EMILIN3Q9NT22 766 aa6.59□□□□□ -1.35
PMS1-209ENST00000424059 VPS9D1Q9Y2B5 631 aa6.59□□□□□ -1.35
PMS1-209ENST00000424059 FBXW7Q969H0 707 aa6.59□□□□□ -1.36
PMS1-209ENST00000424059 PHF14O94880 888 aa6.57□□□□□ -1.36
PMS1-209ENST00000424059 TYW1BQ6NUM6 668 aa6.57□□□□□ -1.36
PMS1-209ENST00000424059 EPAS1Q99814 870 aa6.57□□□□□ -1.36
PMS1-209ENST00000424059 ZBED2Q9BTP6 218 aa6.56□□□□□ -1.36
PMS1-209ENST00000424059 ADAM33Q9BZ11 813 aa6.56□□□□□ -1.36
PMS1-209ENST00000424059 PPP1R3GB7ZBB8 358 aa6.55□□□□□ -1.36
PMS1-209ENST00000424059 RTN4Q9NQC3 1192 aaKnown RBP6.55□□□□□ -1.36
PMS1-209ENST00000424059 NBPF3Q9H094 633 aa6.54□□□□□ -1.36
PMS1-209ENST00000424059 PCDHGA10Q9Y5H3 936 aa6.54□□□□□ -1.36
PMS1-209ENST00000424059 SPDYE16A6NNV3 312 aaPredicted RBP6.54□□□□□ -1.36
PMS1-209ENST00000424059 BHMG1C9JSJ3 638 aaPredicted RBP6.53□□□□□ -1.36
PMS1-209ENST00000424059 ONECUT3O60422 494 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms