RNA–Protein interactions for RNA: ENST00000423664.5

UBXN11-209, Transcript of UBX domain protein 11, humanhuman

TSL 3

Gene UBXN11, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-209ENST00000423664 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
UBXN11-209ENST00000423664 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
UBXN11-209ENST00000423664 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
UBXN11-209ENST00000423664 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
UBXN11-209ENST00000423664 MAP3K1Q13233 1512 aa21.65■■□□□ 1.06
UBXN11-209ENST00000423664 SCAPERQ9BY12 1400 aa21.64■■□□□ 1.06
UBXN11-209ENST00000423664 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
UBXN11-209ENST00000423664 SUPT6HQ7KZ85 1726 aaKnown RBP21.63■■□□□ 1.05
UBXN11-209ENST00000423664 POGZQ7Z3K3 1410 aa21.62■■□□□ 1.05
UBXN11-209ENST00000423664 ZMYM4Q5VZL5 1548 aa21.61■■□□□ 1.05
UBXN11-209ENST00000423664 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
UBXN11-209ENST00000423664 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
UBXN11-209ENST00000423664 ABCC1P33527 1531 aa21.6■■□□□ 1.05
UBXN11-209ENST00000423664 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
UBXN11-209ENST00000423664 SAMD9LQ8IVG5 1584 aa21.57■■□□□ 1.04
UBXN11-209ENST00000423664 ARHGEF40Q8TER5 1519 aa21.57■■□□□ 1.04
UBXN11-209ENST00000423664 NCOA2Q15596 1464 aa21.57■■□□□ 1.04
UBXN11-209ENST00000423664 ZNF518AQ6AHZ1 1483 aa21.55■■□□□ 1.04
UBXN11-209ENST00000423664 ARHGEF12Q9NZN5 1544 aa21.55■■□□□ 1.04
UBXN11-209ENST00000423664 KDM5CP41229 1560 aa21.54■■□□□ 1.04
UBXN11-209ENST00000423664 MAGI2Q86UL8 1455 aa21.54■■□□□ 1.04
UBXN11-209ENST00000423664 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
UBXN11-209ENST00000423664 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
UBXN11-209ENST00000423664 ZFYVE16Q7Z3T8 1539 aa21.53■■□□□ 1.04
UBXN11-209ENST00000423664 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
UBXN11-209ENST00000423664 KDM4FA0A1W2PPD8 638 aa21.51■■□□□ 1.03
UBXN11-209ENST00000423664 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
UBXN11-209ENST00000423664 YEATS2Q9ULM3 1422 aa21.5■■□□□ 1.03
UBXN11-209ENST00000423664 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
UBXN11-209ENST00000423664 APLP2Q06481 763 aa21.5■■□□□ 1.03
UBXN11-209ENST00000423664 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
UBXN11-209ENST00000423664 PLEKHH2Q8IVE3 1493 aa21.49■■□□□ 1.03
UBXN11-209ENST00000423664 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
UBXN11-209ENST00000423664 KIAA1107Q9UPP5 1409 aa21.47■■□□□ 1.03
UBXN11-209ENST00000423664 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
UBXN11-209ENST00000423664 SIGLEC1Q9BZZ2 1709 aa21.45■■□□□ 1.02
UBXN11-209ENST00000423664 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.02
UBXN11-209ENST00000423664 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
UBXN11-209ENST00000423664 KIDINS220Q9ULH0 1771 aa21.43■■□□□ 1.02
UBXN11-209ENST00000423664 HNRNPMP52272 730 aaKnown RBP eCLIP21.43■■□□□ 1.02
UBXN11-209ENST00000423664 BCORL1Q5H9F3 1711 aa21.41■■□□□ 1.02
UBXN11-209ENST00000423664 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
UBXN11-209ENST00000423664 DIP2CQ9Y2E4 1556 aa21.41■■□□□ 1.02
UBXN11-209ENST00000423664 ATP10AO60312 1499 aa21.41■■□□□ 1.02
UBXN11-209ENST00000423664 CAMSAP2Q08AD1 1489 aa21.41■■□□□ 1.02
UBXN11-209ENST00000423664 MBD5Q9P267 1494 aa21.39■■□□□ 1.02
UBXN11-209ENST00000423664 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.02
UBXN11-209ENST00000423664 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
UBXN11-209ENST00000423664 ADAMTSL3P82987 1691 aa21.38■■□□□ 1.01
UBXN11-209ENST00000423664 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
UBXN11-209ENST00000423664 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
UBXN11-209ENST00000423664 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
UBXN11-209ENST00000423664 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
UBXN11-209ENST00000423664 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
UBXN11-209ENST00000423664 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
UBXN11-209ENST00000423664 SPAG9O60271 1321 aaKnown RBP21.35■■□□□ 1.01
UBXN11-209ENST00000423664 ARHGEF5Q12774 1597 aa21.33■■□□□ 1.01
UBXN11-209ENST00000423664 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
UBXN11-209ENST00000423664 MADDQ8WXG6 1647 aa21.31■■□□□ 1
UBXN11-209ENST00000423664 PTPN23Q9H3S7 1636 aa21.29■■□□□ 1
UBXN11-209ENST00000423664 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
UBXN11-209ENST00000423664 AGLP35573 1532 aa21.28■■□□□ 1
UBXN11-209ENST00000423664 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
UBXN11-209ENST00000423664 FER1L4A9Z1Z3 1794 aa21.27■■□□□ 1
UBXN11-209ENST00000423664 RTEL1-TNFRSF6BF6WH68 1400 aa21.27■■□□□ 1
UBXN11-209ENST00000423664 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
UBXN11-209ENST00000423664 RIMS1Q86UR5 1692 aaKnown RBP21.26■□□□□ 0.99
UBXN11-209ENST00000423664 PLXNC1O60486 1568 aa21.24■□□□□ 0.99
UBXN11-209ENST00000423664 MLECQ14165 292 aa21.24■□□□□ 0.99
UBXN11-209ENST00000423664 A2MP01023 1474 aa21.23■□□□□ 0.99
UBXN11-209ENST00000423664 PTPRMP28827 1452 aa21.23■□□□□ 0.99
UBXN11-209ENST00000423664 TCOF1Q13428 1488 aaKnown RBP21.23■□□□□ 0.99
UBXN11-209ENST00000423664 MAST1Q9Y2H9 1570 aa21.22■□□□□ 0.99
UBXN11-209ENST00000423664 CROCC2H7BZ55 1655 aa21.21■□□□□ 0.99
UBXN11-209ENST00000423664 TSPY4P0CV99 314 aa21.19■□□□□ 0.98
UBXN11-209ENST00000423664 TSPY10P0CW01 314 aa21.19■□□□□ 0.98
UBXN11-209ENST00000423664 DNMT1P26358 1616 aaKnown RBP21.18■□□□□ 0.98
UBXN11-209ENST00000423664 ABCC5O15440 1437 aa21.15■□□□□ 0.98
UBXN11-209ENST00000423664 DHX29Q7Z478 1369 aaKnown RBP21.15■□□□□ 0.98
UBXN11-209ENST00000423664 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
UBXN11-209ENST00000423664 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.98
UBXN11-209ENST00000423664 DAPK1P53355 1430 aa21.14■□□□□ 0.98
UBXN11-209ENST00000423664 FAM50AQ14320 339 aaKnown RBP21.08■□□□□ 0.97
UBXN11-209ENST00000423664 C3P01024 1663 aa21.08■□□□□ 0.96
UBXN11-209ENST00000423664 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
UBXN11-209ENST00000423664 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
UBXN11-209ENST00000423664 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
UBXN11-209ENST00000423664 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
UBXN11-209ENST00000423664 EIF2AK4Q9P2K8 1649 aaKnown RBP21.05■□□□□ 0.96
UBXN11-209ENST00000423664 GGT6Q6P531 493 aa21.05■□□□□ 0.96
UBXN11-209ENST00000423664 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
UBXN11-209ENST00000423664 KIF3BO15066 747 aa21.04■□□□□ 0.96
UBXN11-209ENST00000423664 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
UBXN11-209ENST00000423664 ESF1Q9H501 851 aaKnown RBP21.04■□□□□ 0.96
UBXN11-209ENST00000423664 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
UBXN11-209ENST00000423664 CEBPAP49715 358 aaPredicted RBP21.02■□□□□ 0.96
UBXN11-209ENST00000423664 RNF17Q9BXT8 1623 aaKnown RBP21.02■□□□□ 0.96
UBXN11-209ENST00000423664 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
UBXN11-209ENST00000423664 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
UBXN11-209ENST00000423664 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 244.4 ms