RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 YEATS2Q9ULM3 1422 aa30.91■■■□□ 2.54
AC004540.1-203ENST00000421862 FER1L4A9Z1Z3 1794 aa30.88■■■□□ 2.53
AC004540.1-203ENST00000421862 TROQ12816 1431 aaPredicted RBP30.87■■■□□ 2.53
AC004540.1-203ENST00000421862 LMTK3Q96Q04 1460 aa30.86■■■□□ 2.53
AC004540.1-203ENST00000421862 SCAPERQ9BY12 1400 aa30.85■■■□□ 2.53
AC004540.1-203ENST00000421862 ARID4BQ4LE39 1312 aaPredicted RBP30.85■■■□□ 2.53
AC004540.1-203ENST00000421862 CDC42BPBQ9Y5S2 1711 aa30.83■■■□□ 2.53
AC004540.1-203ENST00000421862 KDM5CP41229 1560 aa30.83■■■□□ 2.53
AC004540.1-203ENST00000421862 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
AC004540.1-203ENST00000421862 PREX2Q70Z35 1606 aa30.8■■■□□ 2.52
AC004540.1-203ENST00000421862 CDK11AQ9UQ88 783 aaPredicted RBP30.78■■■□□ 2.52
AC004540.1-203ENST00000421862 CLIP1P30622 1438 aa30.78■■■□□ 2.52
AC004540.1-203ENST00000421862 ARHGAP5Q13017 1502 aa30.77■■■□□ 2.52
AC004540.1-203ENST00000421862 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.52
AC004540.1-203ENST00000421862 ZNF518AQ6AHZ1 1483 aa30.76■■■□□ 2.52
AC004540.1-203ENST00000421862 ARHGEF12Q9NZN5 1544 aa30.76■■■□□ 2.51
AC004540.1-203ENST00000421862 C9orf84Q5VXU9 1444 aa30.74■■■□□ 2.51
AC004540.1-203ENST00000421862 CASKIN1Q8WXD9 1431 aa30.74■■■□□ 2.51
AC004540.1-203ENST00000421862 ATP10AO60312 1499 aa30.74■■■□□ 2.51
AC004540.1-203ENST00000421862 EFCAB2Q5VUJ9 269 aa30.72■■■□□ 2.51
AC004540.1-203ENST00000421862 ATP1B4Q9UN42 357 aaPredicted RBP30.72■■■□□ 2.51
AC004540.1-203ENST00000421862 REREQ9P2R6 1566 aa30.71■■■□□ 2.51
AC004540.1-203ENST00000421862 ITSN2Q9NZM3 1697 aa30.71■■■□□ 2.51
AC004540.1-203ENST00000421862 CDC42BPAQ5VT25 1732 aa30.7■■■□□ 2.51
AC004540.1-203ENST00000421862 DIP2CQ9Y2E4 1556 aa30.7■■■□□ 2.5
AC004540.1-203ENST00000421862 ABCC1P33527 1531 aa30.69■■■□□ 2.5
AC004540.1-203ENST00000421862 FYCO1Q9BQS8 1478 aa30.68■■■□□ 2.5
AC004540.1-203ENST00000421862 ABCA6Q8N139 1617 aa30.67■■■□□ 2.5
AC004540.1-203ENST00000421862 PREX1Q8TCU6 1659 aa30.64■■■□□ 2.5
AC004540.1-203ENST00000421862 MLH3Q9UHC1 1453 aa30.6■■■□□ 2.49
AC004540.1-203ENST00000421862 KIDINS220Q9ULH0 1771 aa30.56■■■□□ 2.48
AC004540.1-203ENST00000421862 AGLP35573 1532 aa30.53■■■□□ 2.48
AC004540.1-203ENST00000421862 MLECQ14165 292 aa30.53■■■□□ 2.48
AC004540.1-203ENST00000421862 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
AC004540.1-203ENST00000421862 SAMD9LQ8IVG5 1584 aa30.51■■■□□ 2.47
AC004540.1-203ENST00000421862 TRAPPC8Q9Y2L5 1435 aa30.51■■■□□ 2.47
AC004540.1-203ENST00000421862 FBXO41Q8TF61 875 aa30.49■■■□□ 2.47
AC004540.1-203ENST00000421862 C3P01024 1663 aa30.49■■■□□ 2.47
AC004540.1-203ENST00000421862 HSPA2P54652 639 aa30.46■■■□□ 2.47
AC004540.1-203ENST00000421862 SETD1BQ9UPS6 1966 aaKnown RBP30.45■■■□□ 2.46
AC004540.1-203ENST00000421862 SYCP2Q9BX26 1530 aa30.43■■■□□ 2.46
AC004540.1-203ENST00000421862 PLPPR3Q6T4P5 718 aa30.42■■■□□ 2.46
AC004540.1-203ENST00000421862 GPATCH8Q9UKJ3 1502 aaKnown RBP30.42■■■□□ 2.46
AC004540.1-203ENST00000421862 STRCQ7RTU9 1775 aa30.41■■■□□ 2.46
AC004540.1-203ENST00000421862 INO80Q9ULG1 1556 aaPredicted RBP30.39■■■□□ 2.46
AC004540.1-203ENST00000421862 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
AC004540.1-203ENST00000421862 PLXNC1O60486 1568 aa30.34■■■□□ 2.45
AC004540.1-203ENST00000421862 UHRF1BP1Q6BDS2 1440 aa30.33■■■□□ 2.45
AC004540.1-203ENST00000421862 ATP7AQ04656 1500 aa30.32■■■□□ 2.44
AC004540.1-203ENST00000421862 CEBPAP49715 358 aaPredicted RBP30.32■■■□□ 2.44
AC004540.1-203ENST00000421862 PLEKHH2Q8IVE3 1493 aa30.31■■■□□ 2.44
AC004540.1-203ENST00000421862 MYT1LQ9UL68 1186 aa30.31■■■□□ 2.44
AC004540.1-203ENST00000421862 TIAM1Q13009 1591 aa30.31■■■□□ 2.44
AC004540.1-203ENST00000421862 KIAA1107Q9UPP5 1409 aa30.3■■■□□ 2.44
AC004540.1-203ENST00000421862 EHBP1L1Q8N3D4 1523 aa30.3■■■□□ 2.44
AC004540.1-203ENST00000421862 SUPT6HQ7KZ85 1726 aaKnown RBP30.3■■■□□ 2.44
AC004540.1-203ENST00000421862 CNTLNQ9NXG0 1405 aa30.29■■■□□ 2.44
AC004540.1-203ENST00000421862 ADGBQ8N7X0 1667 aa30.25■■■□□ 2.43
AC004540.1-203ENST00000421862 MTUS2Q5JR59 1369 aa30.22■■■□□ 2.43
AC004540.1-203ENST00000421862 CCNB3Q8WWL7 1395 aa30.22■■■□□ 2.43
AC004540.1-203ENST00000421862 CLTCQ00610 1675 aaKnown RBP30.2■■■□□ 2.43
AC004540.1-203ENST00000421862 ZNF777Q9ULD5 760 aaPredicted RBP30.19■■■□□ 2.42
AC004540.1-203ENST00000421862 SPAG9O60271 1321 aaKnown RBP30.19■■■□□ 2.42
AC004540.1-203ENST00000421862 ZNF142P52746 1687 aaPredicted RBP30.17■■■□□ 2.42
AC004540.1-203ENST00000421862 CEP162Q5TB80 1403 aa30.17■■■□□ 2.42
AC004540.1-203ENST00000421862 A2MP01023 1474 aa30.17■■■□□ 2.42
AC004540.1-203ENST00000421862 NPATQ14207 1427 aa30.16■■■□□ 2.42
AC004540.1-203ENST00000421862 HNRNPMP52272 730 aaKnown RBP eCLIP30.15■■■□□ 2.42
AC004540.1-203ENST00000421862 CFDP1Q9UEE9 299 aaPredicted RBP30.15■■■□□ 2.42
AC004540.1-203ENST00000421862 CERKQ8TCT0 537 aa30.14■■■□□ 2.42
AC004540.1-203ENST00000421862 MBD5Q9P267 1494 aa30.13■■■□□ 2.41
AC004540.1-203ENST00000421862 MYO3AQ8NEV4 1616 aa30.13■■■□□ 2.41
AC004540.1-203ENST00000421862 ESF1Q9H501 851 aaKnown RBP30.12■■■□□ 2.41
AC004540.1-203ENST00000421862 PTPRTO14522 1441 aa30.12■■■□□ 2.41
AC004540.1-203ENST00000421862 NCOA1Q15788 1441 aa30.09■■■□□ 2.41
AC004540.1-203ENST00000421862 DMRT2Q9Y5R5 561 aa30.09■■■□□ 2.41
AC004540.1-203ENST00000421862 RTEL1-TNFRSF6BF6WH68 1400 aa30.05■■■□□ 2.4
AC004540.1-203ENST00000421862 ZMYM3Q14202 1370 aa30.04■■■□□ 2.4
AC004540.1-203ENST00000421862 CAMSAP1Q5T5Y3 1602 aa30.04■■■□□ 2.4
AC004540.1-203ENST00000421862 NCOA2Q15596 1464 aa30.02■■■□□ 2.4
AC004540.1-203ENST00000421862 LTBP4Q8N2S1 1624 aa30.02■■■□□ 2.4
AC004540.1-203ENST00000421862 CEP170BQ9Y4F5 1589 aaPredicted RBP30.01■■■□□ 2.39
AC004540.1-203ENST00000421862 CAMSAP2Q08AD1 1489 aa30■■■□□ 2.39
AC004540.1-203ENST00000421862 ZNF644Q9H582 1327 aaPredicted RBP30■■■□□ 2.39
AC004540.1-203ENST00000421862 CCDC141Q6ZP82 1450 aa29.99■■■□□ 2.39
AC004540.1-203ENST00000421862 PTPRKQ15262 1439 aa29.99■■■□□ 2.39
AC004540.1-203ENST00000421862 FAM135AQ9P2D6 1515 aa29.98■■■□□ 2.39
AC004540.1-203ENST00000421862 ARHGEF5Q12774 1597 aa29.97■■■□□ 2.39
AC004540.1-203ENST00000421862 PLA2R1Q13018 1463 aa29.96■■■□□ 2.39
AC004540.1-203ENST00000421862 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
AC004540.1-203ENST00000421862 PPP6R1Q9UPN7 881 aa29.91■■■□□ 2.38
AC004540.1-203ENST00000421862 DHX29Q7Z478 1369 aaKnown RBP29.9■■■□□ 2.38
AC004540.1-203ENST00000421862 TCOF1Q13428 1488 aaKnown RBP29.9■■■□□ 2.38
AC004540.1-203ENST00000421862 VPS8Q8N3P4 1428 aa29.89■■■□□ 2.38
AC004540.1-203ENST00000421862 KDM5DQ9BY66 1539 aa29.89■■■□□ 2.38
AC004540.1-203ENST00000421862 GGT6Q6P531 493 aa29.87■■■□□ 2.37
AC004540.1-203ENST00000421862 LRRC9Q6ZRR7 1453 aa29.87■■■□□ 2.37
AC004540.1-203ENST00000421862 DNMT1P26358 1616 aaKnown RBP29.86■■■□□ 2.37
AC004540.1-203ENST00000421862 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
AC004540.1-203ENST00000421862 POLR1AO95602 1720 aaPredicted RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms