RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CDC42BPBQ9Y5S2 1711 aa27.17■■□□□ 1.94
LINC00271-201ENST00000421378 FANCAO15360 1455 aa27.15■■□□□ 1.94
LINC00271-201ENST00000421378 CFAP74Q9C0B2 1584 aa27.14■■□□□ 1.93
LINC00271-201ENST00000421378 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.93
LINC00271-201ENST00000421378 MYOM3Q5VTT5 1437 aa27.13■■□□□ 1.93
LINC00271-201ENST00000421378 CFDP1Q9UEE9 299 aaPredicted RBP27.11■■□□□ 1.93
LINC00271-201ENST00000421378 NEO1Q92859 1461 aa27.11■■□□□ 1.93
LINC00271-201ENST00000421378 EFCAB2Q5VUJ9 269 aa27.09■■□□□ 1.93
LINC00271-201ENST00000421378 MIA2Q96PC5 1412 aa27.05■■□□□ 1.92
LINC00271-201ENST00000421378 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
LINC00271-201ENST00000421378 ZNF777Q9ULD5 760 aaPredicted RBP27.04■■□□□ 1.92
LINC00271-201ENST00000421378 SAMD9LQ8IVG5 1584 aa27.03■■□□□ 1.92
LINC00271-201ENST00000421378 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
LINC00271-201ENST00000421378 ADGRL1O94910 1474 aa27.02■■□□□ 1.92
LINC00271-201ENST00000421378 ABCC1P33527 1531 aa27■■□□□ 1.91
LINC00271-201ENST00000421378 CAMSAP2Q08AD1 1489 aa26.99■■□□□ 1.91
LINC00271-201ENST00000421378 PLEKHH2Q8IVE3 1493 aa26.98■■□□□ 1.91
LINC00271-201ENST00000421378 PTPN23Q9H3S7 1636 aa26.98■■□□□ 1.91
LINC00271-201ENST00000421378 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
LINC00271-201ENST00000421378 SCAPERQ9BY12 1400 aa26.95■■□□□ 1.91
LINC00271-201ENST00000421378 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.9
LINC00271-201ENST00000421378 KDM6BO15054 1643 aa26.95■■□□□ 1.9
LINC00271-201ENST00000421378 KIAA1107Q9UPP5 1409 aa26.94■■□□□ 1.9
LINC00271-201ENST00000421378 DENND4BO75064 1496 aaPredicted RBP26.92■■□□□ 1.9
LINC00271-201ENST00000421378 TCOF1Q13428 1488 aaKnown RBP26.92■■□□□ 1.9
LINC00271-201ENST00000421378 ARHGEF12Q9NZN5 1544 aa26.92■■□□□ 1.9
LINC00271-201ENST00000421378 COL17A1Q9UMD9 1497 aaPredicted RBP26.91■■□□□ 1.9
LINC00271-201ENST00000421378 POGZQ7Z3K3 1410 aa26.89■■□□□ 1.9
LINC00271-201ENST00000421378 RRBP1Q9P2E9 1410 aaKnown RBP26.89■■□□□ 1.89
LINC00271-201ENST00000421378 HNRNPMP52272 730 aaKnown RBP eCLIP26.88■■□□□ 1.89
LINC00271-201ENST00000421378 RICTORQ6R327 1708 aa26.87■■□□□ 1.89
LINC00271-201ENST00000421378 ZNF518AQ6AHZ1 1483 aa26.87■■□□□ 1.89
LINC00271-201ENST00000421378 MBD5Q9P267 1494 aa26.87■■□□□ 1.89
LINC00271-201ENST00000421378 FRMPD1Q5SYB0 1578 aa26.86■■□□□ 1.89
LINC00271-201ENST00000421378 RAPGEF3O95398 923 aa26.86■■□□□ 1.89
LINC00271-201ENST00000421378 FAM50AQ14320 339 aaKnown RBP26.85■■□□□ 1.89
LINC00271-201ENST00000421378 TRAPPC8Q9Y2L5 1435 aa26.85■■□□□ 1.89
LINC00271-201ENST00000421378 ARHGEF5Q12774 1597 aa26.84■■□□□ 1.89
LINC00271-201ENST00000421378 CCDC141Q6ZP82 1450 aa26.82■■□□□ 1.88
LINC00271-201ENST00000421378 KDM5CP41229 1560 aa26.82■■□□□ 1.88
LINC00271-201ENST00000421378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
LINC00271-201ENST00000421378 AFAP1Q8N556 730 aa26.81■■□□□ 1.88
LINC00271-201ENST00000421378 RSPH4AQ5TD94 716 aa26.8■■□□□ 1.88
LINC00271-201ENST00000421378 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
LINC00271-201ENST00000421378 ZMYM4Q5VZL5 1548 aa26.79■■□□□ 1.88
LINC00271-201ENST00000421378 DAPK1P53355 1430 aa26.76■■□□□ 1.87
LINC00271-201ENST00000421378 HECW2Q9P2P5 1572 aa26.75■■□□□ 1.87
LINC00271-201ENST00000421378 CROCC2H7BZ55 1655 aa26.74■■□□□ 1.87
LINC00271-201ENST00000421378 ABCC5O15440 1437 aa26.74■■□□□ 1.87
LINC00271-201ENST00000421378 SPAG9O60271 1321 aaKnown RBP26.72■■□□□ 1.87
LINC00271-201ENST00000421378 MLH3Q9UHC1 1453 aa26.72■■□□□ 1.87
LINC00271-201ENST00000421378 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
LINC00271-201ENST00000421378 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
LINC00271-201ENST00000421378 INO80Q9ULG1 1556 aaPredicted RBP26.71■■□□□ 1.87
LINC00271-201ENST00000421378 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
LINC00271-201ENST00000421378 SHANK2Q9UPX8 1470 aa26.71■■□□□ 1.87
LINC00271-201ENST00000421378 ZFYVE16Q7Z3T8 1539 aa26.71■■□□□ 1.87
LINC00271-201ENST00000421378 ATP7AQ04656 1500 aa26.69■■□□□ 1.86
LINC00271-201ENST00000421378 C9orf84Q5VXU9 1444 aa26.69■■□□□ 1.86
LINC00271-201ENST00000421378 MAST1Q9Y2H9 1570 aa26.69■■□□□ 1.86
LINC00271-201ENST00000421378 MYT1LQ9UL68 1186 aa26.68■■□□□ 1.86
LINC00271-201ENST00000421378 KIDINS220Q9ULH0 1771 aa26.68■■□□□ 1.86
LINC00271-201ENST00000421378 RTEL1-TNFRSF6BF6WH68 1400 aa26.67■■□□□ 1.86
LINC00271-201ENST00000421378 ARHGEF40Q8TER5 1519 aa26.66■■□□□ 1.86
LINC00271-201ENST00000421378 ITGAEP38570 1179 aa26.66■■□□□ 1.86
LINC00271-201ENST00000421378 YEATS2Q9ULM3 1422 aa26.65■■□□□ 1.86
LINC00271-201ENST00000421378 ABCA6Q8N139 1617 aa26.63■■□□□ 1.85
LINC00271-201ENST00000421378 PTPRKQ15262 1439 aa26.63■■□□□ 1.85
LINC00271-201ENST00000421378 DIP2CQ9Y2E4 1556 aa26.61■■□□□ 1.85
LINC00271-201ENST00000421378 ADGBQ8N7X0 1667 aa26.6■■□□□ 1.85
LINC00271-201ENST00000421378 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
LINC00271-201ENST00000421378 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
LINC00271-201ENST00000421378 ADGRL2O95490 1459 aa26.58■■□□□ 1.85
LINC00271-201ENST00000421378 ANKRD30AQ9BXX3 1397 aa26.57■■□□□ 1.84
LINC00271-201ENST00000421378 ATP10AO60312 1499 aa26.55■■□□□ 1.84
LINC00271-201ENST00000421378 NCOA1Q15788 1441 aa26.55■■□□□ 1.84
LINC00271-201ENST00000421378 ROCK1Q13464 1354 aa26.54■■□□□ 1.84
LINC00271-201ENST00000421378 KIF15Q9NS87 1388 aa26.53■■□□□ 1.84
LINC00271-201ENST00000421378 REREQ9P2R6 1566 aa26.51■■□□□ 1.84
LINC00271-201ENST00000421378 A2MP01023 1474 aa26.51■■□□□ 1.83
LINC00271-201ENST00000421378 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
LINC00271-201ENST00000421378 TRIM26Q12899 539 aaPredicted RBP26.5■■□□□ 1.83
LINC00271-201ENST00000421378 DUOX2Q9NRD8 1548 aa26.48■■□□□ 1.83
LINC00271-201ENST00000421378 DHX29Q7Z478 1369 aaKnown RBP26.46■■□□□ 1.83
LINC00271-201ENST00000421378 SIGLEC1Q9BZZ2 1709 aa26.45■■□□□ 1.82
LINC00271-201ENST00000421378 ERBINQ96RT1 1412 aa26.42■■□□□ 1.82
LINC00271-201ENST00000421378 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
LINC00271-201ENST00000421378 AGLP35573 1532 aa26.41■■□□□ 1.82
LINC00271-201ENST00000421378 GCC2Q8IWJ2 1684 aa26.4■■□□□ 1.82
LINC00271-201ENST00000421378 ANKRD50Q9ULJ7 1429 aa26.4■■□□□ 1.82
LINC00271-201ENST00000421378 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.82
LINC00271-201ENST00000421378 EIF2AK4Q9P2K8 1649 aaKnown RBP26.39■■□□□ 1.82
LINC00271-201ENST00000421378 NAIPQ13075 1403 aa26.39■■□□□ 1.81
LINC00271-201ENST00000421378 BCORL1Q5H9F3 1711 aa26.36■■□□□ 1.81
LINC00271-201ENST00000421378 KIF3BO15066 747 aa26.33■■□□□ 1.81
LINC00271-201ENST00000421378 RNF17Q9BXT8 1623 aaKnown RBP26.3■■□□□ 1.8
LINC00271-201ENST00000421378 SETD5Q9C0A6 1442 aa26.27■■□□□ 1.8
LINC00271-201ENST00000421378 DEPDC5O75140 1603 aa26.27■■□□□ 1.8
LINC00271-201ENST00000421378 MLECQ14165 292 aa26.27■■□□□ 1.8
LINC00271-201ENST00000421378 GGT6Q6P531 493 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms