RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 COL17A1Q9UMD9 1497 aaPredicted RBP31.65■■■□□ 2.66
EGFR-204ENST00000420316 CDC42BPBQ9Y5S2 1711 aa31.65■■■□□ 2.66
EGFR-204ENST00000420316 CCNB3Q8WWL7 1395 aa31.62■■■□□ 2.65
EGFR-204ENST00000420316 AKNAQ7Z591 1439 aa31.62■■■□□ 2.65
EGFR-204ENST00000420316 PREX2Q70Z35 1606 aa31.61■■■□□ 2.65
EGFR-204ENST00000420316 ARHGAP5Q13017 1502 aa31.61■■■□□ 2.65
EGFR-204ENST00000420316 GPATCH8Q9UKJ3 1502 aaKnown RBP31.6■■■□□ 2.65
EGFR-204ENST00000420316 CFAP74Q9C0B2 1584 aa31.6■■■□□ 2.65
EGFR-204ENST00000420316 ZNF777Q9ULD5 760 aaPredicted RBP31.55■■■□□ 2.64
EGFR-204ENST00000420316 CFDP1Q9UEE9 299 aaPredicted RBP31.53■■■□□ 2.64
EGFR-204ENST00000420316 ITSN2Q9NZM3 1697 aa31.51■■■□□ 2.63
EGFR-204ENST00000420316 ADGRL1O94910 1474 aa31.5■■■□□ 2.63
EGFR-204ENST00000420316 DENND4BO75064 1496 aaPredicted RBP31.49■■■□□ 2.63
EGFR-204ENST00000420316 SCAPERQ9BY12 1400 aa31.49■■■□□ 2.63
EGFR-204ENST00000420316 RAPGEF3O95398 923 aa31.48■■■□□ 2.63
EGFR-204ENST00000420316 ZNF644Q9H582 1327 aaPredicted RBP31.46■■■□□ 2.63
EGFR-204ENST00000420316 SAMD9LQ8IVG5 1584 aa31.45■■■□□ 2.63
EGFR-204ENST00000420316 MYOM3Q5VTT5 1437 aa31.42■■■□□ 2.62
EGFR-204ENST00000420316 ARHGEF12Q9NZN5 1544 aa31.38■■■□□ 2.61
EGFR-204ENST00000420316 POGZQ7Z3K3 1410 aa31.38■■■□□ 2.61
EGFR-204ENST00000420316 ABCC1P33527 1531 aa31.37■■■□□ 2.61
EGFR-204ENST00000420316 PLEKHH2Q8IVE3 1493 aa31.37■■■□□ 2.61
EGFR-204ENST00000420316 KIAA1107Q9UPP5 1409 aa31.37■■■□□ 2.61
EGFR-204ENST00000420316 FRMPD1Q5SYB0 1578 aa31.36■■■□□ 2.61
EGFR-204ENST00000420316 HNRNPMP52272 730 aaKnown RBP eCLIP31.35■■■□□ 2.61
EGFR-204ENST00000420316 SYCP2Q9BX26 1530 aa31.35■■■□□ 2.61
EGFR-204ENST00000420316 RICTORQ6R327 1708 aa31.34■■■□□ 2.61
EGFR-204ENST00000420316 CAMSAP2Q08AD1 1489 aa31.34■■■□□ 2.61
EGFR-204ENST00000420316 ZNF518AQ6AHZ1 1483 aa31.34■■■□□ 2.61
EGFR-204ENST00000420316 MIA2Q96PC5 1412 aa31.33■■■□□ 2.61
EGFR-204ENST00000420316 AFAP1Q8N556 730 aa31.33■■■□□ 2.61
EGFR-204ENST00000420316 TRAPPC8Q9Y2L5 1435 aa31.3■■■□□ 2.6
EGFR-204ENST00000420316 FGD6Q6ZV73 1430 aa31.3■■■□□ 2.6
EGFR-204ENST00000420316 ZMYM4Q5VZL5 1548 aa31.28■■■□□ 2.6
EGFR-204ENST00000420316 PTPN23Q9H3S7 1636 aa31.28■■■□□ 2.6
EGFR-204ENST00000420316 MAGI2Q86UL8 1455 aa31.27■■■□□ 2.6
EGFR-204ENST00000420316 KDM5CP41229 1560 aa31.24■■■□□ 2.59
EGFR-204ENST00000420316 MBD5Q9P267 1494 aa31.24■■■□□ 2.59
EGFR-204ENST00000420316 RSPH4AQ5TD94 716 aa31.23■■■□□ 2.59
EGFR-204ENST00000420316 FAM50AQ14320 339 aaKnown RBP31.2■■■□□ 2.58
EGFR-204ENST00000420316 MLH3Q9UHC1 1453 aa31.2■■■□□ 2.58
EGFR-204ENST00000420316 MYT1LQ9UL68 1186 aa31.18■■■□□ 2.58
EGFR-204ENST00000420316 TCOF1Q13428 1488 aaKnown RBP31.17■■■□□ 2.58
EGFR-204ENST00000420316 ZFYVE16Q7Z3T8 1539 aa31.16■■■□□ 2.58
EGFR-204ENST00000420316 YEATS2Q9ULM3 1422 aa31.16■■■□□ 2.58
EGFR-204ENST00000420316 SPAG9O60271 1321 aaKnown RBP31.16■■■□□ 2.58
EGFR-204ENST00000420316 ARHGEF40Q8TER5 1519 aa31.13■■■□□ 2.57
EGFR-204ENST00000420316 HECW2Q9P2P5 1572 aa31.13■■■□□ 2.57
EGFR-204ENST00000420316 CCDC141Q6ZP82 1450 aa31.13■■■□□ 2.57
EGFR-204ENST00000420316 ARHGEF5Q12774 1597 aa31.11■■■□□ 2.57
EGFR-204ENST00000420316 TSPY4P0CV99 314 aa31.09■■■□□ 2.57
EGFR-204ENST00000420316 TSPY10P0CW01 314 aa31.09■■■□□ 2.57
EGFR-204ENST00000420316 ATP10AO60312 1499 aa31.08■■■□□ 2.57
EGFR-204ENST00000420316 KIDINS220Q9ULH0 1771 aa31.08■■■□□ 2.57
EGFR-204ENST00000420316 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.56
EGFR-204ENST00000420316 ABCC5O15440 1437 aa31.05■■■□□ 2.56
EGFR-204ENST00000420316 DNMT1P26358 1616 aaKnown RBP31.05■■■□□ 2.56
EGFR-204ENST00000420316 ABCA6Q8N139 1617 aa31.04■■■□□ 2.56
EGFR-204ENST00000420316 ITGAEP38570 1179 aa31.04■■■□□ 2.56
EGFR-204ENST00000420316 RRBP1Q9P2E9 1410 aaKnown RBP31.04■■■□□ 2.56
EGFR-204ENST00000420316 INO80Q9ULG1 1556 aaPredicted RBP31.04■■■□□ 2.56
EGFR-204ENST00000420316 ATP7AQ04656 1500 aa31.03■■■□□ 2.56
EGFR-204ENST00000420316 DAPK1P53355 1430 aa31.03■■■□□ 2.56
EGFR-204ENST00000420316 C9orf84Q5VXU9 1444 aa31.02■■■□□ 2.56
EGFR-204ENST00000420316 CROCC2H7BZ55 1655 aa31.02■■■□□ 2.56
EGFR-204ENST00000420316 DIP2CQ9Y2E4 1556 aa31.01■■■□□ 2.55
EGFR-204ENST00000420316 CHIC2Q9UKJ5 165 aa31■■■□□ 2.55
EGFR-204ENST00000420316 ARID4BQ4LE39 1312 aaPredicted RBP30.99■■■□□ 2.55
EGFR-204ENST00000420316 SIGLEC1Q9BZZ2 1709 aa30.98■■■□□ 2.55
EGFR-204ENST00000420316 REREQ9P2R6 1566 aa30.96■■■□□ 2.55
EGFR-204ENST00000420316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.96■■■□□ 2.55
EGFR-204ENST00000420316 PTPRKQ15262 1439 aa30.94■■■□□ 2.54
EGFR-204ENST00000420316 MAST1Q9Y2H9 1570 aa30.93■■■□□ 2.54
EGFR-204ENST00000420316 KDM4FA0A1W2PPD8 638 aa30.92■■■□□ 2.54
EGFR-204ENST00000420316 SHANK2Q9UPX8 1470 aa30.92■■■□□ 2.54
EGFR-204ENST00000420316 ADGBQ8N7X0 1667 aa30.9■■■□□ 2.54
EGFR-204ENST00000420316 A2MP01023 1474 aa30.89■■■□□ 2.54
EGFR-204ENST00000420316 AGLP35573 1532 aa30.88■■■□□ 2.53
EGFR-204ENST00000420316 DHX29Q7Z478 1369 aaKnown RBP30.87■■■□□ 2.53
EGFR-204ENST00000420316 RRP7BPQ9NSQ0 103 aa30.86■■■□□ 2.53
EGFR-204ENST00000420316 PLXNC1O60486 1568 aa30.82■■■□□ 2.52
EGFR-204ENST00000420316 MLECQ14165 292 aa30.82■■■□□ 2.52
EGFR-204ENST00000420316 BCORL1Q5H9F3 1711 aa30.81■■■□□ 2.52
EGFR-204ENST00000420316 ANKRD30AQ9BXX3 1397 aa30.8■■■□□ 2.52
EGFR-204ENST00000420316 KIF15Q9NS87 1388 aa30.78■■■□□ 2.52
EGFR-204ENST00000420316 NCOA1Q15788 1441 aa30.77■■■□□ 2.52
EGFR-204ENST00000420316 ADGRL2O95490 1459 aa30.77■■■□□ 2.52
EGFR-204ENST00000420316 ADAMTSL3P82987 1691 aa30.75■■■□□ 2.51
EGFR-204ENST00000420316 DUOX2Q9NRD8 1548 aa30.73■■■□□ 2.51
EGFR-204ENST00000420316 KIF3BO15066 747 aa30.71■■■□□ 2.51
EGFR-204ENST00000420316 ROCK1Q13464 1354 aa30.7■■■□□ 2.51
EGFR-204ENST00000420316 GGT6Q6P531 493 aa30.68■■■□□ 2.5
EGFR-204ENST00000420316 PPP6R1Q9UPN7 881 aa30.68■■■□□ 2.5
EGFR-204ENST00000420316 MADDQ8WXG6 1647 aa30.65■■■□□ 2.5
EGFR-204ENST00000420316 ERBINQ96RT1 1412 aa30.65■■■□□ 2.5
EGFR-204ENST00000420316 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
EGFR-204ENST00000420316 ESF1Q9H501 851 aaKnown RBP30.63■■■□□ 2.49
EGFR-204ENST00000420316 EIF2AK4Q9P2K8 1649 aaKnown RBP30.61■■■□□ 2.49
EGFR-204ENST00000420316 PTPRMP28827 1452 aa30.6■■■□□ 2.49
EGFR-204ENST00000420316 ANKRD50Q9ULJ7 1429 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms