RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 NCOA2Q15596 1464 aa33.57■■■□□ 2.96
HMCES-203ENST00000417226 CCNB3Q8WWL7 1395 aa33.54■■■□□ 2.96
HMCES-203ENST00000417226 COL17A1Q9UMD9 1497 aaPredicted RBP33.54■■■□□ 2.96
HMCES-203ENST00000417226 GPATCH8Q9UKJ3 1502 aaKnown RBP33.53■■■□□ 2.96
HMCES-203ENST00000417226 PHLDB1Q86UU1 1377 aa33.53■■■□□ 2.96
HMCES-203ENST00000417226 AKNAQ7Z591 1439 aa33.52■■■□□ 2.96
HMCES-203ENST00000417226 ITSN2Q9NZM3 1697 aa33.52■■■□□ 2.96
HMCES-203ENST00000417226 EFCAB2Q5VUJ9 269 aa33.5■■■□□ 2.95
HMCES-203ENST00000417226 ADGRL1O94910 1474 aa33.46■■■□□ 2.95
HMCES-203ENST00000417226 CFDP1Q9UEE9 299 aaPredicted RBP33.41■■■□□ 2.94
HMCES-203ENST00000417226 SAMD9LQ8IVG5 1584 aa33.39■■■□□ 2.94
HMCES-203ENST00000417226 FRMPD1Q5SYB0 1578 aa33.39■■■□□ 2.93
HMCES-203ENST00000417226 DENND4BO75064 1496 aaPredicted RBP33.38■■■□□ 2.93
HMCES-203ENST00000417226 ZNF777Q9ULD5 760 aaPredicted RBP33.38■■■□□ 2.93
HMCES-203ENST00000417226 RICTORQ6R327 1708 aa33.38■■■□□ 2.93
HMCES-203ENST00000417226 SCAPERQ9BY12 1400 aa33.38■■■□□ 2.93
HMCES-203ENST00000417226 ABCC1P33527 1531 aa33.37■■■□□ 2.93
HMCES-203ENST00000417226 RAPGEF3O95398 923 aa33.36■■■□□ 2.93
HMCES-203ENST00000417226 MYOM3Q5VTT5 1437 aa33.32■■■□□ 2.92
HMCES-203ENST00000417226 POGZQ7Z3K3 1410 aa33.32■■■□□ 2.92
HMCES-203ENST00000417226 SYCP2Q9BX26 1530 aa33.3■■■□□ 2.92
HMCES-203ENST00000417226 PPARGC1BQ86YN6 1023 aaKnown RBP33.29■■■□□ 2.92
HMCES-203ENST00000417226 ARHGEF12Q9NZN5 1544 aa33.29■■■□□ 2.92
HMCES-203ENST00000417226 PLEKHH2Q8IVE3 1493 aa33.27■■■□□ 2.92
HMCES-203ENST00000417226 ZNF644Q9H582 1327 aaPredicted RBP33.26■■■□□ 2.92
HMCES-203ENST00000417226 CAMSAP2Q08AD1 1489 aa33.25■■■□□ 2.91
HMCES-203ENST00000417226 ZNF518AQ6AHZ1 1483 aa33.25■■■□□ 2.91
HMCES-203ENST00000417226 ZMYM4Q5VZL5 1548 aa33.24■■■□□ 2.91
HMCES-203ENST00000417226 MIA2Q96PC5 1412 aa33.22■■■□□ 2.91
HMCES-203ENST00000417226 KIAA1107Q9UPP5 1409 aa33.22■■■□□ 2.91
HMCES-203ENST00000417226 TRAPPC8Q9Y2L5 1435 aa33.22■■■□□ 2.91
HMCES-203ENST00000417226 KDM5CP41229 1560 aa33.2■■■□□ 2.91
HMCES-203ENST00000417226 HNRNPMP52272 730 aaKnown RBP eCLIP33.19■■■□□ 2.9
HMCES-203ENST00000417226 AFAP1Q8N556 730 aa33.18■■■□□ 2.9
HMCES-203ENST00000417226 PTPN23Q9H3S7 1636 aa33.17■■■□□ 2.9
HMCES-203ENST00000417226 FGD6Q6ZV73 1430 aa33.16■■■□□ 2.9
HMCES-203ENST00000417226 HECW2Q9P2P5 1572 aa33.14■■■□□ 2.9
HMCES-203ENST00000417226 ARHGEF40Q8TER5 1519 aa33.14■■■□□ 2.9
HMCES-203ENST00000417226 MBD5Q9P267 1494 aa33.13■■■□□ 2.89
HMCES-203ENST00000417226 ZFYVE16Q7Z3T8 1539 aa33.12■■■□□ 2.89
HMCES-203ENST00000417226 MAGI2Q86UL8 1455 aa33.11■■■□□ 2.89
HMCES-203ENST00000417226 YEATS2Q9ULM3 1422 aa33.09■■■□□ 2.89
HMCES-203ENST00000417226 ARHGEF5Q12774 1597 aa33.08■■■□□ 2.89
HMCES-203ENST00000417226 CCDC141Q6ZP82 1450 aa33.07■■■□□ 2.88
HMCES-203ENST00000417226 MYT1LQ9UL68 1186 aa33.06■■■□□ 2.88
HMCES-203ENST00000417226 TCOF1Q13428 1488 aaKnown RBP33.06■■■□□ 2.88
HMCES-203ENST00000417226 MLH3Q9UHC1 1453 aa33.06■■■□□ 2.88
HMCES-203ENST00000417226 KIDINS220Q9ULH0 1771 aa33.04■■■□□ 2.88
HMCES-203ENST00000417226 INO80Q9ULG1 1556 aaPredicted RBP33.03■■■□□ 2.88
HMCES-203ENST00000417226 SPAG9O60271 1321 aaKnown RBP33.02■■■□□ 2.88
HMCES-203ENST00000417226 ABCA6Q8N139 1617 aa33.02■■■□□ 2.88
HMCES-203ENST00000417226 ATP7AQ04656 1500 aa33.01■■■□□ 2.87
HMCES-203ENST00000417226 DIP2CQ9Y2E4 1556 aa32.99■■■□□ 2.87
HMCES-203ENST00000417226 RSPH4AQ5TD94 716 aa32.98■■■□□ 2.87
HMCES-203ENST00000417226 FAM50AQ14320 339 aaKnown RBP32.96■■■□□ 2.87
HMCES-203ENST00000417226 CROCC2H7BZ55 1655 aa32.96■■■□□ 2.87
HMCES-203ENST00000417226 DNMT1P26358 1616 aaKnown RBP32.95■■■□□ 2.87
HMCES-203ENST00000417226 ATP10AO60312 1499 aa32.94■■■□□ 2.86
HMCES-203ENST00000417226 C9orf84Q5VXU9 1444 aa32.92■■■□□ 2.86
HMCES-203ENST00000417226 SIGLEC1Q9BZZ2 1709 aa32.92■■■□□ 2.86
HMCES-203ENST00000417226 RTEL1-TNFRSF6BF6WH68 1400 aa32.9■■■□□ 2.86
HMCES-203ENST00000417226 DAPK1P53355 1430 aa32.9■■■□□ 2.86
HMCES-203ENST00000417226 ABCC5O15440 1437 aa32.89■■■□□ 2.86
HMCES-203ENST00000417226 TSPY4P0CV99 314 aa32.89■■■□□ 2.86
HMCES-203ENST00000417226 TSPY10P0CW01 314 aa32.89■■■□□ 2.86
HMCES-203ENST00000417226 MAST1Q9Y2H9 1570 aa32.89■■■□□ 2.86
HMCES-203ENST00000417226 REREQ9P2R6 1566 aa32.86■■■□□ 2.85
HMCES-203ENST00000417226 ADGBQ8N7X0 1667 aa32.86■■■□□ 2.85
HMCES-203ENST00000417226 SHANK2Q9UPX8 1470 aa32.85■■■□□ 2.85
HMCES-203ENST00000417226 ARID4BQ4LE39 1312 aaPredicted RBP32.85■■■□□ 2.85
HMCES-203ENST00000417226 RRBP1Q9P2E9 1410 aaKnown RBP32.85■■■□□ 2.85
HMCES-203ENST00000417226 PLXNC1O60486 1568 aa32.79■■■□□ 2.84
HMCES-203ENST00000417226 A2MP01023 1474 aa32.79■■■□□ 2.84
HMCES-203ENST00000417226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.78■■■□□ 2.84
HMCES-203ENST00000417226 BCORL1Q5H9F3 1711 aa32.77■■■□□ 2.84
HMCES-203ENST00000417226 AGLP35573 1532 aa32.73■■■□□ 2.83
HMCES-203ENST00000417226 CHIC2Q9UKJ5 165 aa32.73■■■□□ 2.83
HMCES-203ENST00000417226 PTPRKQ15262 1439 aa32.69■■■□□ 2.82
HMCES-203ENST00000417226 ITGAEP38570 1179 aa32.69■■■□□ 2.82
HMCES-203ENST00000417226 DHX29Q7Z478 1369 aaKnown RBP32.69■■■□□ 2.82
HMCES-203ENST00000417226 KDM4FA0A1W2PPD8 638 aa32.68■■■□□ 2.82
HMCES-203ENST00000417226 ADAMTSL3P82987 1691 aa32.68■■■□□ 2.82
HMCES-203ENST00000417226 MLECQ14165 292 aa32.67■■■□□ 2.82
HMCES-203ENST00000417226 ADGRL2O95490 1459 aa32.67■■■□□ 2.82
HMCES-203ENST00000417226 ANKRD30AQ9BXX3 1397 aa32.66■■■□□ 2.82
HMCES-203ENST00000417226 KIF15Q9NS87 1388 aa32.66■■■□□ 2.82
HMCES-203ENST00000417226 DUOX2Q9NRD8 1548 aa32.64■■■□□ 2.82
HMCES-203ENST00000417226 RRP7BPQ9NSQ0 103 aa32.64■■■□□ 2.82
HMCES-203ENST00000417226 MADDQ8WXG6 1647 aa32.64■■■□□ 2.82
HMCES-203ENST00000417226 NCOA1Q15788 1441 aa32.63■■■□□ 2.81
HMCES-203ENST00000417226 FER1L4A9Z1Z3 1794 aa32.62■■■□□ 2.81
HMCES-203ENST00000417226 EIF2AK4Q9P2K8 1649 aaKnown RBP32.58■■■□□ 2.81
HMCES-203ENST00000417226 RIMS1Q86UR5 1692 aaKnown RBP32.56■■■□□ 2.8
HMCES-203ENST00000417226 ROCK1Q13464 1354 aa32.55■■■□□ 2.8
HMCES-203ENST00000417226 ERBINQ96RT1 1412 aa32.55■■■□□ 2.8
HMCES-203ENST00000417226 KIF3BO15066 747 aa32.54■■■□□ 2.8
HMCES-203ENST00000417226 GGT6Q6P531 493 aa32.51■■■□□ 2.79
HMCES-203ENST00000417226 RNF17Q9BXT8 1623 aaKnown RBP32.5■■■□□ 2.79
HMCES-203ENST00000417226 ANKRD50Q9ULJ7 1429 aa32.44■■■□□ 2.78
HMCES-203ENST00000417226 PTPRMP28827 1452 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms