RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 ILDR1Q86SU0 546 aaPredicted RBP25.52■■□□□ 1.68
RHBDF1-202ENST00000417043 TROQ12816 1431 aaPredicted RBP25.52■■□□□ 1.68
RHBDF1-202ENST00000417043 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.68
RHBDF1-202ENST00000417043 ZFYVE16Q7Z3T8 1539 aa25.51■■□□□ 1.67
RHBDF1-202ENST00000417043 POGZQ7Z3K3 1410 aa25.48■■□□□ 1.67
RHBDF1-202ENST00000417043 PLPPR3Q6T4P5 718 aa25.47■■□□□ 1.67
RHBDF1-202ENST00000417043 RIMS1Q86UR5 1692 aaKnown RBP25.47■■□□□ 1.67
RHBDF1-202ENST00000417043 MLECQ14165 292 aa25.46■■□□□ 1.67
RHBDF1-202ENST00000417043 PCF11O94913 1555 aaKnown RBP25.46■■□□□ 1.67
RHBDF1-202ENST00000417043 MAGI2Q86UL8 1455 aa25.45■■□□□ 1.66
RHBDF1-202ENST00000417043 CLIP1P30622 1438 aa25.45■■□□□ 1.66
RHBDF1-202ENST00000417043 CASKIN1Q8WXD9 1431 aa25.45■■□□□ 1.66
RHBDF1-202ENST00000417043 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
RHBDF1-202ENST00000417043 AFAP1Q8N556 730 aa25.41■■□□□ 1.66
RHBDF1-202ENST00000417043 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
RHBDF1-202ENST00000417043 ATP10AO60312 1499 aa25.38■■□□□ 1.65
RHBDF1-202ENST00000417043 CCDC18Q5T9S5 1454 aa25.37■■□□□ 1.65
RHBDF1-202ENST00000417043 MYT1LQ9UL68 1186 aa25.35■■□□□ 1.65
RHBDF1-202ENST00000417043 ZNF518AQ6AHZ1 1483 aa25.34■■□□□ 1.65
RHBDF1-202ENST00000417043 LMTK3Q96Q04 1460 aa25.34■■□□□ 1.65
RHBDF1-202ENST00000417043 C9orf84Q5VXU9 1444 aa25.32■■□□□ 1.64
RHBDF1-202ENST00000417043 FER1L4A9Z1Z3 1794 aa25.31■■□□□ 1.64
RHBDF1-202ENST00000417043 FYCO1Q9BQS8 1478 aa25.31■■□□□ 1.64
RHBDF1-202ENST00000417043 PREX2Q70Z35 1606 aa25.3■■□□□ 1.64
RHBDF1-202ENST00000417043 HSPA2P54652 639 aa25.3■■□□□ 1.64
RHBDF1-202ENST00000417043 ARHGEF12Q9NZN5 1544 aa25.3■■□□□ 1.64
RHBDF1-202ENST00000417043 KDM5CP41229 1560 aa25.3■■□□□ 1.64
RHBDF1-202ENST00000417043 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
RHBDF1-202ENST00000417043 CDC42BPAQ5VT25 1732 aa25.28■■□□□ 1.64
RHBDF1-202ENST00000417043 CEBPAP49715 358 aaPredicted RBP25.25■■□□□ 1.63
RHBDF1-202ENST00000417043 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
RHBDF1-202ENST00000417043 ABCC1P33527 1531 aa25.25■■□□□ 1.63
RHBDF1-202ENST00000417043 DIP2CQ9Y2E4 1556 aa25.24■■□□□ 1.63
RHBDF1-202ENST00000417043 ITSN2Q9NZM3 1697 aa25.23■■□□□ 1.63
RHBDF1-202ENST00000417043 ABCA6Q8N139 1617 aa25.22■■□□□ 1.63
RHBDF1-202ENST00000417043 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
RHBDF1-202ENST00000417043 GPATCH8Q9UKJ3 1502 aaKnown RBP25.18■■□□□ 1.62
RHBDF1-202ENST00000417043 HNRNPMP52272 730 aaKnown RBP eCLIP25.17■■□□□ 1.62
RHBDF1-202ENST00000417043 KIDINS220Q9ULH0 1771 aa25.16■■□□□ 1.62
RHBDF1-202ENST00000417043 SAMD9LQ8IVG5 1584 aa25.16■■□□□ 1.62
RHBDF1-202ENST00000417043 REREQ9P2R6 1566 aa25.14■■□□□ 1.61
RHBDF1-202ENST00000417043 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
RHBDF1-202ENST00000417043 MTUS2Q5JR59 1369 aa25.11■■□□□ 1.61
RHBDF1-202ENST00000417043 CFDP1Q9UEE9 299 aaPredicted RBP25.11■■□□□ 1.61
RHBDF1-202ENST00000417043 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
RHBDF1-202ENST00000417043 FBXO41Q8TF61 875 aa25.1■■□□□ 1.61
RHBDF1-202ENST00000417043 CEP162Q5TB80 1403 aa25.09■■□□□ 1.61
RHBDF1-202ENST00000417043 AGLP35573 1532 aa25.08■■□□□ 1.61
RHBDF1-202ENST00000417043 PREX1Q8TCU6 1659 aa25.07■■□□□ 1.6
RHBDF1-202ENST00000417043 SPAG9O60271 1321 aaKnown RBP25.07■■□□□ 1.6
RHBDF1-202ENST00000417043 ESF1Q9H501 851 aaKnown RBP25.05■■□□□ 1.6
RHBDF1-202ENST00000417043 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
RHBDF1-202ENST00000417043 ZNF644Q9H582 1327 aaPredicted RBP25.05■■□□□ 1.6
RHBDF1-202ENST00000417043 C3P01024 1663 aa25.04■■□□□ 1.6
RHBDF1-202ENST00000417043 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
RHBDF1-202ENST00000417043 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
RHBDF1-202ENST00000417043 SUPT6HQ7KZ85 1726 aaKnown RBP25.01■■□□□ 1.59
RHBDF1-202ENST00000417043 TIAM1Q13009 1591 aa25■■□□□ 1.59
RHBDF1-202ENST00000417043 ATP7AQ04656 1500 aa24.99■■□□□ 1.59
RHBDF1-202ENST00000417043 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
RHBDF1-202ENST00000417043 PLEKHH2Q8IVE3 1493 aa24.99■■□□□ 1.59
RHBDF1-202ENST00000417043 EHBP1L1Q8N3D4 1523 aa24.98■■□□□ 1.59
RHBDF1-202ENST00000417043 INO80Q9ULG1 1556 aaPredicted RBP24.96■■□□□ 1.59
RHBDF1-202ENST00000417043 STRCQ7RTU9 1775 aa24.95■■□□□ 1.59
RHBDF1-202ENST00000417043 A2MP01023 1474 aa24.92■■□□□ 1.58
RHBDF1-202ENST00000417043 CNTLNQ9NXG0 1405 aa24.92■■□□□ 1.58
RHBDF1-202ENST00000417043 MBD5Q9P267 1494 aa24.91■■□□□ 1.58
RHBDF1-202ENST00000417043 CERKQ8TCT0 537 aa24.91■■□□□ 1.58
RHBDF1-202ENST00000417043 GGT6Q6P531 493 aa24.9■■□□□ 1.58
RHBDF1-202ENST00000417043 ZMYM3Q14202 1370 aa24.9■■□□□ 1.58
RHBDF1-202ENST00000417043 NCOA2Q15596 1464 aa24.89■■□□□ 1.57
RHBDF1-202ENST00000417043 PLXNC1O60486 1568 aa24.88■■□□□ 1.57
RHBDF1-202ENST00000417043 CLTCQ00610 1675 aaKnown RBP24.87■■□□□ 1.57
RHBDF1-202ENST00000417043 MROH2AA6NES4 1674 aa24.85■■□□□ 1.57
RHBDF1-202ENST00000417043 DMRT2Q9Y5R5 561 aa24.85■■□□□ 1.57
RHBDF1-202ENST00000417043 ADGBQ8N7X0 1667 aa24.84■■□□□ 1.57
RHBDF1-202ENST00000417043 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
RHBDF1-202ENST00000417043 NPATQ14207 1427 aa24.8■■□□□ 1.56
RHBDF1-202ENST00000417043 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
RHBDF1-202ENST00000417043 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
RHBDF1-202ENST00000417043 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
RHBDF1-202ENST00000417043 DHX29Q7Z478 1369 aaKnown RBP24.78■■□□□ 1.56
RHBDF1-202ENST00000417043 CCDC141Q6ZP82 1450 aa24.77■■□□□ 1.56
RHBDF1-202ENST00000417043 PTPRKQ15262 1439 aa24.76■■□□□ 1.55
RHBDF1-202ENST00000417043 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
RHBDF1-202ENST00000417043 KIF3BO15066 747 aa24.75■■□□□ 1.55
RHBDF1-202ENST00000417043 PTPRTO14522 1441 aa24.75■■□□□ 1.55
RHBDF1-202ENST00000417043 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
RHBDF1-202ENST00000417043 CAMSAP1Q5T5Y3 1602 aa24.75■■□□□ 1.55
RHBDF1-202ENST00000417043 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
RHBDF1-202ENST00000417043 NCKAP5LQ9HCH0 1330 aa24.72■■□□□ 1.55
RHBDF1-202ENST00000417043 RSPH4AQ5TD94 716 aa24.72■■□□□ 1.55
RHBDF1-202ENST00000417043 MYO3AQ8NEV4 1616 aa24.7■■□□□ 1.54
RHBDF1-202ENST00000417043 TSPY4P0CV99 314 aa24.69■■□□□ 1.54
RHBDF1-202ENST00000417043 TSPY10P0CW01 314 aa24.69■■□□□ 1.54
RHBDF1-202ENST00000417043 FBXO31Q5XUX0 539 aaPredicted RBP24.67■■□□□ 1.54
RHBDF1-202ENST00000417043 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
RHBDF1-202ENST00000417043 CEP170BQ9Y4F5 1589 aaPredicted RBP24.66■■□□□ 1.54
RHBDF1-202ENST00000417043 ZNF142P52746 1687 aaPredicted RBP24.65■■□□□ 1.54
RHBDF1-202ENST00000417043 LTBP4Q8N2S1 1624 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms