RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
ATG4AP1-201ENST00000416893 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
ATG4AP1-201ENST00000416893 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
ATG4AP1-201ENST00000416893 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
ATG4AP1-201ENST00000416893 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
ATG4AP1-201ENST00000416893 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
ATG4AP1-201ENST00000416893 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
ATG4AP1-201ENST00000416893 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
ATG4AP1-201ENST00000416893 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
ATG4AP1-201ENST00000416893 ERBB3P21860 1342 aa11.04□□□□□ -0.64
ATG4AP1-201ENST00000416893 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
ATG4AP1-201ENST00000416893 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
ATG4AP1-201ENST00000416893 KIF3CO14782 793 aa10.98□□□□□ -0.65
ATG4AP1-201ENST00000416893 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
ATG4AP1-201ENST00000416893 C2orf72A6NCS6 295 aa10.97□□□□□ -0.65
ATG4AP1-201ENST00000416893 ARSIQ5FYB1 569 aa10.96□□□□□ -0.65
ATG4AP1-201ENST00000416893 PPP1R37O75864 691 aa10.95□□□□□ -0.66
ATG4AP1-201ENST00000416893 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
ATG4AP1-201ENST00000416893 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
ATG4AP1-201ENST00000416893 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
ATG4AP1-201ENST00000416893 ZNF687Q8N1G0 1237 aa10.9□□□□□ -0.66
ATG4AP1-201ENST00000416893 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
ATG4AP1-201ENST00000416893 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
ATG4AP1-201ENST00000416893 ZNF316A6NFI3 1004 aaPredicted RBP10.87□□□□□ -0.67
ATG4AP1-201ENST00000416893 SLC34A2O95436 690 aa10.86□□□□□ -0.67
ATG4AP1-201ENST00000416893 NUDT7P0C024 238 aa10.84□□□□□ -0.67
ATG4AP1-201ENST00000416893 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
ATG4AP1-201ENST00000416893 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
ATG4AP1-201ENST00000416893 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
ATG4AP1-201ENST00000416893 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
ATG4AP1-201ENST00000416893 LHX6Q9UPM6 363 aa10.78□□□□□ -0.68
ATG4AP1-201ENST00000416893 FOXK1P85037 733 aa10.77□□□□□ -0.69
ATG4AP1-201ENST00000416893 GPHNQ9NQX3 736 aaPredicted RBP10.77□□□□□ -0.69
ATG4AP1-201ENST00000416893 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
ATG4AP1-201ENST00000416893 PLPP6Q8IY26 295 aa10.75□□□□□ -0.69
ATG4AP1-201ENST00000416893 RNF166Q96A37 237 aaPredicted RBP10.75□□□□□ -0.69
ATG4AP1-201ENST00000416893 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
ATG4AP1-201ENST00000416893 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
ATG4AP1-201ENST00000416893 MYT1LQ9UL68 1186 aa10.74□□□□□ -0.69
ATG4AP1-201ENST00000416893 DSG2Q14126 1118 aa10.73□□□□□ -0.69
ATG4AP1-201ENST00000416893 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
ATG4AP1-201ENST00000416893 PTGER2P43116 358 aa10.72□□□□□ -0.69
ATG4AP1-201ENST00000416893 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
ATG4AP1-201ENST00000416893 PBX2P40425 430 aa10.71□□□□□ -0.69
ATG4AP1-201ENST00000416893 KDM4FA0A1W2PPD8 638 aa10.69□□□□□ -0.7
ATG4AP1-201ENST00000416893 POTEEQ6S8J3 1075 aa10.69□□□□□ -0.7
ATG4AP1-201ENST00000416893 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
ATG4AP1-201ENST00000416893 AXIN2Q9Y2T1 843 aa10.67□□□□□ -0.7
ATG4AP1-201ENST00000416893 TBC1D12O60347 775 aa10.66□□□□□ -0.7
ATG4AP1-201ENST00000416893 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
ATG4AP1-201ENST00000416893 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
ATG4AP1-201ENST00000416893 ARHGAP33O14559 1287 aa10.62□□□□□ -0.71
ATG4AP1-201ENST00000416893 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
ATG4AP1-201ENST00000416893 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
ATG4AP1-201ENST00000416893 PDE4AP27815 886 aa10.6□□□□□ -0.71
ATG4AP1-201ENST00000416893 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
ATG4AP1-201ENST00000416893 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
ATG4AP1-201ENST00000416893 UPF1Q92900 1129 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATG4AP1-201ENST00000416893 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
ATG4AP1-201ENST00000416893 PSEN2P49810 448 aa10.55□□□□□ -0.72
ATG4AP1-201ENST00000416893 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
ATG4AP1-201ENST00000416893 TK2O00142 265 aa10.53□□□□□ -0.72
ATG4AP1-201ENST00000416893 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
ATG4AP1-201ENST00000416893 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.73
ATG4AP1-201ENST00000416893 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
ATG4AP1-201ENST00000416893 HRO43593 1189 aa10.49□□□□□ -0.73
ATG4AP1-201ENST00000416893 MFSD10Q14728 455 aa10.49□□□□□ -0.73
ATG4AP1-201ENST00000416893 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
ATG4AP1-201ENST00000416893 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
ATG4AP1-201ENST00000416893 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
ATG4AP1-201ENST00000416893 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
ATG4AP1-201ENST00000416893 EVI5O60447 810 aa10.46□□□□□ -0.73
ATG4AP1-201ENST00000416893 FOSBP53539 338 aa10.46□□□□□ -0.73
ATG4AP1-201ENST00000416893 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
ATG4AP1-201ENST00000416893 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
ATG4AP1-201ENST00000416893 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
ATG4AP1-201ENST00000416893 MAP3K9P80192 1104 aa10.44□□□□□ -0.74
ATG4AP1-201ENST00000416893 JPH4Q96JJ6 628 aa10.44□□□□□ -0.74
ATG4AP1-201ENST00000416893 HCSTQ9UBK5 93 aa10.44□□□□□ -0.74
ATG4AP1-201ENST00000416893 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
ATG4AP1-201ENST00000416893 EMILIN3Q9NT22 766 aa10.42□□□□□ -0.74
ATG4AP1-201ENST00000416893 PTPREP23469 700 aa10.41□□□□□ -0.74
ATG4AP1-201ENST00000416893 VPS9D1Q9Y2B5 631 aa10.41□□□□□ -0.74
ATG4AP1-201ENST00000416893 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
ATG4AP1-201ENST00000416893 SLC4A5Q9BY07 1137 aa10.39□□□□□ -0.75
ATG4AP1-201ENST00000416893 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
ATG4AP1-201ENST00000416893 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
ATG4AP1-201ENST00000416893 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
ATG4AP1-201ENST00000416893 ZBED2Q9BTP6 218 aa10.36□□□□□ -0.75
ATG4AP1-201ENST00000416893 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
ATG4AP1-201ENST00000416893 CAMK2BQ13554 666 aa10.33□□□□□ -0.76
ATG4AP1-201ENST00000416893 PCDHGA10Q9Y5H3 936 aa10.33□□□□□ -0.76
ATG4AP1-201ENST00000416893 BHMG1C9JSJ3 638 aaPredicted RBP10.32□□□□□ -0.76
ATG4AP1-201ENST00000416893 DPYSL4O14531 572 aa10.29□□□□□ -0.76
ATG4AP1-201ENST00000416893 PHF14O94880 888 aa10.29□□□□□ -0.76
ATG4AP1-201ENST00000416893 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
ATG4AP1-201ENST00000416893 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
ATG4AP1-201ENST00000416893 FBXW7Q969H0 707 aa10.29□□□□□ -0.76
ATG4AP1-201ENST00000416893 PPP1R3GB7ZBB8 358 aa10.28□□□□□ -0.76
ATG4AP1-201ENST00000416893 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms