RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
NCLP2-201ENST00000416078 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
NCLP2-201ENST00000416078 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
NCLP2-201ENST00000416078 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
NCLP2-201ENST00000416078 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
NCLP2-201ENST00000416078 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
NCLP2-201ENST00000416078 NLRP6P59044 892 aa11.52□□□□□ -0.56
NCLP2-201ENST00000416078 ERBB3P21860 1342 aa11.5□□□□□ -0.57
NCLP2-201ENST00000416078 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
NCLP2-201ENST00000416078 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
NCLP2-201ENST00000416078 DCAF8L2P0C7V8 631 aa11.47□□□□□ -0.57
NCLP2-201ENST00000416078 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
NCLP2-201ENST00000416078 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
NCLP2-201ENST00000416078 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
NCLP2-201ENST00000416078 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
NCLP2-201ENST00000416078 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
NCLP2-201ENST00000416078 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
NCLP2-201ENST00000416078 G3V3G9 751 aa11.37□□□□□ -0.59
NCLP2-201ENST00000416078 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
NCLP2-201ENST00000416078 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
NCLP2-201ENST00000416078 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
NCLP2-201ENST00000416078 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
NCLP2-201ENST00000416078 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
NCLP2-201ENST00000416078 PPP1R37O75864 691 aa11.33□□□□□ -0.6
NCLP2-201ENST00000416078 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
NCLP2-201ENST00000416078 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
NCLP2-201ENST00000416078 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.6
NCLP2-201ENST00000416078 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
NCLP2-201ENST00000416078 RGS20O76081 388 aa11.24□□□□□ -0.61
NCLP2-201ENST00000416078 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
NCLP2-201ENST00000416078 KIF3CO14782 793 aa11.22□□□□□ -0.61
NCLP2-201ENST00000416078 ANKRD13DQ6ZTN6 518 aa11.2□□□□□ -0.62
NCLP2-201ENST00000416078 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
NCLP2-201ENST00000416078 IRX2Q9BZI1 471 aaPredicted RBP11.18□□□□□ -0.62
NCLP2-201ENST00000416078 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
NCLP2-201ENST00000416078 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
NCLP2-201ENST00000416078 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
NCLP2-201ENST00000416078 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
NCLP2-201ENST00000416078 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
NCLP2-201ENST00000416078 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
NCLP2-201ENST00000416078 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
NCLP2-201ENST00000416078 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
NCLP2-201ENST00000416078 FOXK1P85037 733 aa11.08□□□□□ -0.64
NCLP2-201ENST00000416078 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
NCLP2-201ENST00000416078 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
NCLP2-201ENST00000416078 MFSD10Q14728 455 aa11.05□□□□□ -0.64
NCLP2-201ENST00000416078 SLC34A2O95436 690 aa11.04□□□□□ -0.64
NCLP2-201ENST00000416078 PDE4AP27815 886 aa11.04□□□□□ -0.64
NCLP2-201ENST00000416078 DSG2Q14126 1118 aa11.03□□□□□ -0.64
NCLP2-201ENST00000416078 PLPP6Q8IY26 295 aa11□□□□□ -0.65
NCLP2-201ENST00000416078 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
NCLP2-201ENST00000416078 GPR153Q6NV75 609 aa11□□□□□ -0.65
NCLP2-201ENST00000416078 PBX2P40425 430 aa10.98□□□□□ -0.65
NCLP2-201ENST00000416078 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
NCLP2-201ENST00000416078 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
NCLP2-201ENST00000416078 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
NCLP2-201ENST00000416078 LARP6Q9BRS8 491 aaKnown RBP10.96□□□□□ -0.65
NCLP2-201ENST00000416078 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
NCLP2-201ENST00000416078 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
NCLP2-201ENST00000416078 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
NCLP2-201ENST00000416078 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
NCLP2-201ENST00000416078 CAMK2BQ13554 666 aa10.9□□□□□ -0.66
NCLP2-201ENST00000416078 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
NCLP2-201ENST00000416078 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
NCLP2-201ENST00000416078 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
NCLP2-201ENST00000416078 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
NCLP2-201ENST00000416078 TBC1D12O60347 775 aa10.84□□□□□ -0.67
NCLP2-201ENST00000416078 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
NCLP2-201ENST00000416078 NUDT7P0C024 238 aa10.82□□□□□ -0.68
NCLP2-201ENST00000416078 Q6ZNB5 142 aa10.81□□□□□ -0.68
NCLP2-201ENST00000416078 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
NCLP2-201ENST00000416078 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
NCLP2-201ENST00000416078 E2F4Q16254 413 aa10.77□□□□□ -0.69
NCLP2-201ENST00000416078 WDR70Q9NW82 654 aa10.77□□□□□ -0.69
NCLP2-201ENST00000416078 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
NCLP2-201ENST00000416078 LHX6Q9UPM6 363 aa10.76□□□□□ -0.69
NCLP2-201ENST00000416078 A0A0G2JS52 829 aa10.75□□□□□ -0.69
NCLP2-201ENST00000416078 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
NCLP2-201ENST00000416078 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
NCLP2-201ENST00000416078 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
NCLP2-201ENST00000416078 EVI5O60447 810 aa10.73□□□□□ -0.69
NCLP2-201ENST00000416078 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
NCLP2-201ENST00000416078 DPYSL4O14531 572 aa10.71□□□□□ -0.69
NCLP2-201ENST00000416078 TK2O00142 265 aa10.7□□□□□ -0.7
NCLP2-201ENST00000416078 PDIA6Q15084 440 aa10.7□□□□□ -0.7
NCLP2-201ENST00000416078 JPH4Q96JJ6 628 aa10.68□□□□□ -0.7
NCLP2-201ENST00000416078 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
NCLP2-201ENST00000416078 FOSBP53539 338 aa10.67□□□□□ -0.7
NCLP2-201ENST00000416078 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
NCLP2-201ENST00000416078 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
NCLP2-201ENST00000416078 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
NCLP2-201ENST00000416078 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
NCLP2-201ENST00000416078 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
NCLP2-201ENST00000416078 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
NCLP2-201ENST00000416078 VSIG10Q8N0Z9 540 aa10.64□□□□□ -0.71
NCLP2-201ENST00000416078 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
NCLP2-201ENST00000416078 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
NCLP2-201ENST00000416078 ARHGAP33O14559 1287 aa10.63□□□□□ -0.71
NCLP2-201ENST00000416078 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
NCLP2-201ENST00000416078 HRO43593 1189 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms