RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MYT1LQ9UL68 1186 aa10.96□□□□□ -0.65
TRAPPC13-203ENST00000415825 NLRP6P59044 892 aa10.94□□□□□ -0.66
TRAPPC13-203ENST00000415825 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
TRAPPC13-203ENST00000415825 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
TRAPPC13-203ENST00000415825 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
TRAPPC13-203ENST00000415825 TMEM92Q6UXU6 159 aa10.87□□□□□ -0.67
TRAPPC13-203ENST00000415825 ANKRD13DQ6ZTN6 518 aa10.87□□□□□ -0.67
TRAPPC13-203ENST00000415825 ARSIQ5FYB1 569 aa10.86□□□□□ -0.67
TRAPPC13-203ENST00000415825 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
TRAPPC13-203ENST00000415825 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
TRAPPC13-203ENST00000415825 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC13-203ENST00000415825 RNF25Q96BH1 459 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC13-203ENST00000415825 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC13-203ENST00000415825 STK25O00506 426 aa10.81□□□□□ -0.68
TRAPPC13-203ENST00000415825 PBX2P40425 430 aa10.78□□□□□ -0.68
TRAPPC13-203ENST00000415825 TMC2Q8TDI7 906 aa10.77□□□□□ -0.69
TRAPPC13-203ENST00000415825 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC13-203ENST00000415825 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC13-203ENST00000415825 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
TRAPPC13-203ENST00000415825 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC13-203ENST00000415825 NUDT7P0C024 238 aa10.72□□□□□ -0.69
TRAPPC13-203ENST00000415825 C2orf72A6NCS6 295 aa10.71□□□□□ -0.69
TRAPPC13-203ENST00000415825 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC13-203ENST00000415825 MFRPQ9BY79 579 aa10.69□□□□□ -0.7
TRAPPC13-203ENST00000415825 SLC34A2O95436 690 aa10.66□□□□□ -0.7
TRAPPC13-203ENST00000415825 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
TRAPPC13-203ENST00000415825 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
TRAPPC13-203ENST00000415825 HCSTQ9UBK5 93 aa10.65□□□□□ -0.7
TRAPPC13-203ENST00000415825 LHX6Q9UPM6 363 aa10.65□□□□□ -0.7
TRAPPC13-203ENST00000415825 KIF3CO14782 793 aa10.64□□□□□ -0.71
TRAPPC13-203ENST00000415825 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
TRAPPC13-203ENST00000415825 AXIN2Q9Y2T1 843 aa10.61□□□□□ -0.71
TRAPPC13-203ENST00000415825 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
TRAPPC13-203ENST00000415825 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
TRAPPC13-203ENST00000415825 TBC1D12O60347 775 aa10.59□□□□□ -0.71
TRAPPC13-203ENST00000415825 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
TRAPPC13-203ENST00000415825 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
TRAPPC13-203ENST00000415825 TK2O00142 265 aa10.52□□□□□ -0.73
TRAPPC13-203ENST00000415825 RGL2O15211 777 aa10.52□□□□□ -0.73
TRAPPC13-203ENST00000415825 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
TRAPPC13-203ENST00000415825 PTCD2Q8WV60 388 aaKnown RBP10.48□□□□□ -0.73
TRAPPC13-203ENST00000415825 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
TRAPPC13-203ENST00000415825 FOXK1P85037 733 aa10.46□□□□□ -0.73
TRAPPC13-203ENST00000415825 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
TRAPPC13-203ENST00000415825 PPP1R37O75864 691 aa10.44□□□□□ -0.74
TRAPPC13-203ENST00000415825 PKD2Q13563 968 aa10.44□□□□□ -0.74
TRAPPC13-203ENST00000415825 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC13-203ENST00000415825 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
TRAPPC13-203ENST00000415825 PSEN2P49810 448 aa10.43□□□□□ -0.74
TRAPPC13-203ENST00000415825 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
TRAPPC13-203ENST00000415825 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
TRAPPC13-203ENST00000415825 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
TRAPPC13-203ENST00000415825 HRO43593 1189 aa10.38□□□□□ -0.75
TRAPPC13-203ENST00000415825 DSG2Q14126 1118 aa10.38□□□□□ -0.75
TRAPPC13-203ENST00000415825 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
TRAPPC13-203ENST00000415825 ZNF454Q8N9F8 522 aa10.36□□□□□ -0.75
TRAPPC13-203ENST00000415825 PTPN5P54829 565 aa10.35□□□□□ -0.75
TRAPPC13-203ENST00000415825 KDM4FA0A1W2PPD8 638 aa10.34□□□□□ -0.75
TRAPPC13-203ENST00000415825 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
TRAPPC13-203ENST00000415825 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
TRAPPC13-203ENST00000415825 PTPREP23469 700 aa10.32□□□□□ -0.76
TRAPPC13-203ENST00000415825 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
TRAPPC13-203ENST00000415825 MRPL50Q8N5N7 158 aaKnown RBP10.3□□□□□ -0.76
TRAPPC13-203ENST00000415825 RGS20O76081 388 aa10.29□□□□□ -0.76
TRAPPC13-203ENST00000415825 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
TRAPPC13-203ENST00000415825 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
TRAPPC13-203ENST00000415825 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
TRAPPC13-203ENST00000415825 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
TRAPPC13-203ENST00000415825 WNT2BQ93097 391 aa10.27□□□□□ -0.77
TRAPPC13-203ENST00000415825 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
TRAPPC13-203ENST00000415825 PDE4AP27815 886 aa10.26□□□□□ -0.77
TRAPPC13-203ENST00000415825 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
TRAPPC13-203ENST00000415825 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC13-203ENST00000415825 FOSBP53539 338 aa10.22□□□□□ -0.77
TRAPPC13-203ENST00000415825 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
TRAPPC13-203ENST00000415825 IFFO2Q5TF58 517 aa10.21□□□□□ -0.77
TRAPPC13-203ENST00000415825 ZDHHC16Q969W1 377 aa10.21□□□□□ -0.77
TRAPPC13-203ENST00000415825 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
TRAPPC13-203ENST00000415825 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
TRAPPC13-203ENST00000415825 EVI5O60447 810 aa10.19□□□□□ -0.78
TRAPPC13-203ENST00000415825 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
TRAPPC13-203ENST00000415825 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
TRAPPC13-203ENST00000415825 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
TRAPPC13-203ENST00000415825 A0A0G2JS52 829 aa10.15□□□□□ -0.78
TRAPPC13-203ENST00000415825 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC13-203ENST00000415825 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
TRAPPC13-203ENST00000415825 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
TRAPPC13-203ENST00000415825 ANO8Q9HCE9 1232 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC13-203ENST00000415825 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
TRAPPC13-203ENST00000415825 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
TRAPPC13-203ENST00000415825 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC13-203ENST00000415825 FBXW7Q969H0 707 aa10.1□□□□□ -0.79
TRAPPC13-203ENST00000415825 RABGEF1Q9UJ41 708 aa10.1□□□□□ -0.79
TRAPPC13-203ENST00000415825 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
TRAPPC13-203ENST00000415825 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
TRAPPC13-203ENST00000415825 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
TRAPPC13-203ENST00000415825 DCAF8L2P0C7V8 631 aa10.06□□□□□ -0.8
TRAPPC13-203ENST00000415825 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
TRAPPC13-203ENST00000415825 PHF14O94880 888 aa10.03□□□□□ -0.8
TRAPPC13-203ENST00000415825 PROX2Q3B8N5 592 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms