RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 VGFO15240 615 aaPredicted RBP8.35□□□□□ -1.07
LINC00428-201ENST00000415620 MS4A4AQ96JQ5 239 aa8.35□□□□□ -1.07
LINC00428-201ENST00000415620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.34□□□□□ -1.07
LINC00428-201ENST00000415620 RNF25Q96BH1 459 aaPredicted RBP8.34□□□□□ -1.07
LINC00428-201ENST00000415620 ZFP91Q96JP5 570 aaPredicted RBP8.34□□□□□ -1.07
LINC00428-201ENST00000415620 PHF8Q9UPP1 1060 aa8.34□□□□□ -1.07
LINC00428-201ENST00000415620 ARSIQ5FYB1 569 aa8.33□□□□□ -1.08
LINC00428-201ENST00000415620 ANKRD13DQ6ZTN6 518 aa8.32□□□□□ -1.08
LINC00428-201ENST00000415620 ZNF316A6NFI3 1004 aaPredicted RBP8.31□□□□□ -1.08
LINC00428-201ENST00000415620 NLRP6P59044 892 aa8.3□□□□□ -1.08
LINC00428-201ENST00000415620 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
LINC00428-201ENST00000415620 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00428-201ENST00000415620 KHSRPQ92945 711 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00428-201ENST00000415620 PBX2P40425 430 aa8.23□□□□□ -1.09
LINC00428-201ENST00000415620 FBXO22Q8NEZ5 403 aa8.23□□□□□ -1.09
LINC00428-201ENST00000415620 BCL11BQ9C0K0 894 aaPredicted RBP8.23□□□□□ -1.09
LINC00428-201ENST00000415620 STK24Q9Y6E0 443 aa8.21□□□□□ -1.1
LINC00428-201ENST00000415620 NUDT7P0C024 238 aa8.2□□□□□ -1.1
LINC00428-201ENST00000415620 C2orf72A6NCS6 295 aa8.19□□□□□ -1.1
LINC00428-201ENST00000415620 KIF3CO14782 793 aa8.19□□□□□ -1.1
LINC00428-201ENST00000415620 LHX6Q9UPM6 363 aa8.18□□□□□ -1.1
LINC00428-201ENST00000415620 SLC34A2O95436 690 aa8.17□□□□□ -1.1
LINC00428-201ENST00000415620 MFRPQ9BY79 579 aa8.17□□□□□ -1.1
LINC00428-201ENST00000415620 PCDHGA4Q9Y5G9 962 aa8.17□□□□□ -1.1
LINC00428-201ENST00000415620 STK25O00506 426 aa8.15□□□□□ -1.1
LINC00428-201ENST00000415620 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
LINC00428-201ENST00000415620 PLA2G2EQ9NZK7 142 aa8.15□□□□□ -1.1
LINC00428-201ENST00000415620 HCSTQ9UBK5 93 aa8.15□□□□□ -1.1
LINC00428-201ENST00000415620 AXIN2Q9Y2T1 843 aa8.15□□□□□ -1.1
LINC00428-201ENST00000415620 PSDA5PKW4 1024 aaPredicted RBP8.13□□□□□ -1.11
LINC00428-201ENST00000415620 POTEEQ6S8J3 1075 aa8.13□□□□□ -1.11
LINC00428-201ENST00000415620 ARHGAP33O14559 1287 aa8.12□□□□□ -1.11
LINC00428-201ENST00000415620 ADGRD1Q6QNK2 874 aa8.1□□□□□ -1.11
LINC00428-201ENST00000415620 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
LINC00428-201ENST00000415620 TK2O00142 265 aa8.07□□□□□ -1.12
LINC00428-201ENST00000415620 PKD2Q13563 968 aa8.07□□□□□ -1.12
LINC00428-201ENST00000415620 RGL2O15211 777 aa8.05□□□□□ -1.12
LINC00428-201ENST00000415620 STAC3Q96MF2 364 aa8.05□□□□□ -1.12
LINC00428-201ENST00000415620 PTCD2Q8WV60 388 aaKnown RBP8.04□□□□□ -1.12
LINC00428-201ENST00000415620 HRO43593 1189 aa8.02□□□□□ -1.13
LINC00428-201ENST00000415620 KDM4FA0A1W2PPD8 638 aa8.01□□□□□ -1.13
LINC00428-201ENST00000415620 TBC1D12O60347 775 aa8.01□□□□□ -1.13
LINC00428-201ENST00000415620 PPP1R37O75864 691 aa8.01□□□□□ -1.13
LINC00428-201ENST00000415620 PSEN2P49810 448 aa8.01□□□□□ -1.13
LINC00428-201ENST00000415620 PPP4R3BQ5MIZ7 849 aa8.01□□□□□ -1.13
LINC00428-201ENST00000415620 DMRTA1Q5VZB9 504 aa8.01□□□□□ -1.13
LINC00428-201ENST00000415620 KCNH8Q96L42 1107 aa8□□□□□ -1.13
LINC00428-201ENST00000415620 FOXK1P85037 733 aa7.99□□□□□ -1.13
LINC00428-201ENST00000415620 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
LINC00428-201ENST00000415620 PLPP6Q8IY26 295 aa7.98□□□□□ -1.13
LINC00428-201ENST00000415620 GPHNQ9NQX3 736 aaPredicted RBP7.96□□□□□ -1.14
LINC00428-201ENST00000415620 KCNK17Q96T54 332 aa7.94□□□□□ -1.14
LINC00428-201ENST00000415620 DSG2Q14126 1118 aa7.92□□□□□ -1.14
LINC00428-201ENST00000415620 PTPN5P54829 565 aa7.91□□□□□ -1.14
LINC00428-201ENST00000415620 VPS9D1Q9Y2B5 631 aa7.91□□□□□ -1.14
LINC00428-201ENST00000415620 RGS20O76081 388 aa7.9□□□□□ -1.14
LINC00428-201ENST00000415620 HS6ST3Q8IZP7 471 aa7.9□□□□□ -1.14
LINC00428-201ENST00000415620 IFFO2Q5TF58 517 aa7.88□□□□□ -1.15
LINC00428-201ENST00000415620 ZNF454Q8N9F8 522 aa7.88□□□□□ -1.15
LINC00428-201ENST00000415620 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
LINC00428-201ENST00000415620 GOLGA8CPA6NN73 597 aa7.87□□□□□ -1.15
LINC00428-201ENST00000415620 OXER1Q8TDS5 423 aa7.86□□□□□ -1.15
LINC00428-201ENST00000415620 DNAJC5Q9H3Z4 198 aa7.86□□□□□ -1.15
LINC00428-201ENST00000415620 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
LINC00428-201ENST00000415620 PTPREP23469 700 aa7.84□□□□□ -1.15
LINC00428-201ENST00000415620 THSD4Q6ZMP0 1018 aa7.84□□□□□ -1.15
LINC00428-201ENST00000415620 UPF1Q92900 1129 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC00428-201ENST00000415620 IRX2Q9BZI1 471 aaPredicted RBP7.84□□□□□ -1.15
LINC00428-201ENST00000415620 BHMG1C9JSJ3 638 aaPredicted RBP7.83□□□□□ -1.16
LINC00428-201ENST00000415620 MRPL50Q8N5N7 158 aaKnown RBP7.83□□□□□ -1.16
LINC00428-201ENST00000415620 WNT2BQ93097 391 aa7.82□□□□□ -1.16
LINC00428-201ENST00000415620 A0A0G2JS52 829 aa7.81□□□□□ -1.16
LINC00428-201ENST00000415620 FOSBP53539 338 aa7.81□□□□□ -1.16
LINC00428-201ENST00000415620 NKX1-1Q15270 411 aaPredicted RBP7.81□□□□□ -1.16
LINC00428-201ENST00000415620 RYDENQ9NUL5 291 aaKnown RBP7.81□□□□□ -1.16
LINC00428-201ENST00000415620 ZBED2Q9BTP6 218 aa7.8□□□□□ -1.16
LINC00428-201ENST00000415620 PPP1R15BQ5SWA1 713 aa7.79□□□□□ -1.16
LINC00428-201ENST00000415620 NBPF3Q9H094 633 aa7.79□□□□□ -1.16
LINC00428-201ENST00000415620 JPH4Q96JJ6 628 aa7.78□□□□□ -1.16
LINC00428-201ENST00000415620 CRISPLD2Q9H0B8 497 aa7.78□□□□□ -1.16
LINC00428-201ENST00000415620 ANO8Q9HCE9 1232 aaPredicted RBP7.78□□□□□ -1.16
LINC00428-201ENST00000415620 CHGAP10645 457 aaKnown RBP7.77□□□□□ -1.17
LINC00428-201ENST00000415620 PDE4AP27815 886 aa7.77□□□□□ -1.17
LINC00428-201ENST00000415620 ZDHHC16Q969W1 377 aa7.77□□□□□ -1.17
LINC00428-201ENST00000415620 EVI5O60447 810 aa7.75□□□□□ -1.17
LINC00428-201ENST00000415620 ADAM33Q9BZ11 813 aa7.74□□□□□ -1.17
LINC00428-201ENST00000415620 ANKK1Q8NFD2 765 aa7.72□□□□□ -1.17
LINC00428-201ENST00000415620 NCKAP5LQ9HCH0 1330 aa7.72□□□□□ -1.17
LINC00428-201ENST00000415620 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
LINC00428-201ENST00000415620 RABGEF1Q9UJ41 708 aa7.71□□□□□ -1.18
LINC00428-201ENST00000415620 PPP1R3GB7ZBB8 358 aa7.7□□□□□ -1.18
LINC00428-201ENST00000415620 ITGBL1O95965 494 aaPredicted RBP7.69□□□□□ -1.18
LINC00428-201ENST00000415620 DDX27Q96GQ7 796 aaKnown RBP7.68□□□□□ -1.18
LINC00428-201ENST00000415620 LARP6Q9BRS8 491 aaKnown RBP7.68□□□□□ -1.18
LINC00428-201ENST00000415620 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
LINC00428-201ENST00000415620 LAPTM4BQ86VI4 370 aa7.67□□□□□ -1.18
LINC00428-201ENST00000415620 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
LINC00428-201ENST00000415620 Q6ZNB5 142 aa7.66□□□□□ -1.18
LINC00428-201ENST00000415620 PCDHGA10Q9Y5H3 936 aa7.66□□□□□ -1.18
LINC00428-201ENST00000415620 SOWAHBA6NEL2 793 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms