RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 KIF3CO14782 793 aa14.79□□□□□ -0.04
ATG4C-204ENST00000414558 C2orf72A6NCS6 295 aa14.78□□□□□ -0.04
ATG4C-204ENST00000414558 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
ATG4C-204ENST00000414558 ST18O60284 1047 aa14.74□□□□□ -0.05
ATG4C-204ENST00000414558 HOXB3P14651 431 aaPredicted RBP14.73□□□□□ -0.05
ATG4C-204ENST00000414558 LCE2DQ5TA82 110 aaPredicted RBP14.73□□□□□ -0.05
ATG4C-204ENST00000414558 PAXIP1Q6ZW49 1069 aaPredicted RBP14.72□□□□□ -0.05
ATG4C-204ENST00000414558 GPHNQ9NQX3 736 aaPredicted RBP14.72□□□□□ -0.05
ATG4C-204ENST00000414558 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
ATG4C-204ENST00000414558 RIMBP2O15034 1052 aa14.7□□□□□ -0.06
ATG4C-204ENST00000414558 ZNF710Q8N1W2 664 aa14.7□□□□□ -0.06
ATG4C-204ENST00000414558 PDE4AP27815 886 aa14.66□□□□□ -0.06
ATG4C-204ENST00000414558 CRISPLD2Q9H0B8 497 aa14.66□□□□□ -0.06
ATG4C-204ENST00000414558 FOXK1P85037 733 aa14.65□□□□□ -0.06
ATG4C-204ENST00000414558 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
ATG4C-204ENST00000414558 POTEMA6NI47 508 aa14.63□□□□□ -0.07
ATG4C-204ENST00000414558 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
ATG4C-204ENST00000414558 NCKAP5LQ9HCH0 1330 aa14.62□□□□□ -0.07
ATG4C-204ENST00000414558 DSG2Q14126 1118 aa14.61□□□□□ -0.07
ATG4C-204ENST00000414558 PLPP6Q8IY26 295 aa14.6□□□□□ -0.07
ATG4C-204ENST00000414558 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
ATG4C-204ENST00000414558 SLC34A2O95436 690 aa14.58□□□□□ -0.08
ATG4C-204ENST00000414558 HOXB1P14653 301 aaPredicted RBP14.58□□□□□ -0.08
ATG4C-204ENST00000414558 LARP6Q9BRS8 491 aaKnown RBP14.57□□□□□ -0.08
ATG4C-204ENST00000414558 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
ATG4C-204ENST00000414558 MARVELD3Q96A59 401 aa14.56□□□□□ -0.08
ATG4C-204ENST00000414558 EMP3P54852 163 aa14.55□□□□□ -0.08
ATG4C-204ENST00000414558 DDX27Q96GQ7 796 aaKnown RBP14.55□□□□□ -0.08
ATG4C-204ENST00000414558 GPR153Q6NV75 609 aa14.54□□□□□ -0.08
ATG4C-204ENST00000414558 MFSD10Q14728 455 aa14.53□□□□□ -0.08
ATG4C-204ENST00000414558 ARSIQ5FYB1 569 aa14.5□□□□□ -0.09
ATG4C-204ENST00000414558 PCDHGA4Q9Y5G9 962 aa14.49□□□□□ -0.09
ATG4C-204ENST00000414558 PTCD2Q8WV60 388 aaKnown RBP14.48□□□□□ -0.09
ATG4C-204ENST00000414558 TBC1D12O60347 775 aa14.45□□□□□ -0.1
ATG4C-204ENST00000414558 PLCB2Q00722 1185 aa14.45□□□□□ -0.1
ATG4C-204ENST00000414558 FAM205CA6NFA0 338 aa14.44□□□□□ -0.1
ATG4C-204ENST00000414558 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.1
ATG4C-204ENST00000414558 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
ATG4C-204ENST00000414558 ERBB3P21860 1342 aa14.42□□□□□ -0.1
ATG4C-204ENST00000414558 OXER1Q8TDS5 423 aa14.41□□□□□ -0.1
ATG4C-204ENST00000414558 HS3ST6Q96QI5 342 aa14.41□□□□□ -0.1
ATG4C-204ENST00000414558 NUDT7P0C024 238 aa14.4□□□□□ -0.1
ATG4C-204ENST00000414558 UPF1Q92900 1129 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATG4C-204ENST00000414558 TSHZ2Q9NRE2 1034 aa14.39□□□□□ -0.11
ATG4C-204ENST00000414558 CDAN1Q8IWY9 1227 aa14.37□□□□□ -0.11
ATG4C-204ENST00000414558 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
ATG4C-204ENST00000414558 WDR70Q9NW82 654 aa14.36□□□□□ -0.11
ATG4C-204ENST00000414558 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
ATG4C-204ENST00000414558 CAMK2BQ13554 666 aa14.34□□□□□ -0.11
ATG4C-204ENST00000414558 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
ATG4C-204ENST00000414558 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
ATG4C-204ENST00000414558 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
ATG4C-204ENST00000414558 EMILIN3Q9NT22 766 aa14.31□□□□□ -0.12
ATG4C-204ENST00000414558 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
ATG4C-204ENST00000414558 LHX6Q9UPM6 363 aa14.3□□□□□ -0.12
ATG4C-204ENST00000414558 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
ATG4C-204ENST00000414558 E2F4Q16254 413 aa14.27□□□□□ -0.13
ATG4C-204ENST00000414558 ZNF687Q8N1G0 1237 aa14.25□□□□□ -0.13
ATG4C-204ENST00000414558 EVI5O60447 810 aa14.24□□□□□ -0.13
ATG4C-204ENST00000414558 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
ATG4C-204ENST00000414558 DPYSL4O14531 572 aa14.21□□□□□ -0.13
ATG4C-204ENST00000414558 ANO8Q9HCE9 1232 aaPredicted RBP14.2□□□□□ -0.14
ATG4C-204ENST00000414558 PPP4R3BQ5MIZ7 849 aa14.18□□□□□ -0.14
ATG4C-204ENST00000414558 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
ATG4C-204ENST00000414558 KRTAP3-2Q9BYR7 98 aa14.17□□□□□ -0.14
ATG4C-204ENST00000414558 PBX2P40425 430 aa14.15□□□□□ -0.14
ATG4C-204ENST00000414558 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
ATG4C-204ENST00000414558 ZNF454Q8N9F8 522 aa14.14□□□□□ -0.15
ATG4C-204ENST00000414558 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
ATG4C-204ENST00000414558 FOSBP53539 338 aa14.12□□□□□ -0.15
ATG4C-204ENST00000414558 SPDYE16A6NNV3 312 aaPredicted RBP14.11□□□□□ -0.15
ATG4C-204ENST00000414558 PDIA6Q15084 440 aa14.11□□□□□ -0.15
ATG4C-204ENST00000414558 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
ATG4C-204ENST00000414558 ARHGAP33O14559 1287 aa14.06□□□□□ -0.16
ATG4C-204ENST00000414558 KCNH8Q96L42 1107 aa14.06□□□□□ -0.16
ATG4C-204ENST00000414558 KCNV2Q8TDN2 545 aa14.05□□□□□ -0.16
ATG4C-204ENST00000414558 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
ATG4C-204ENST00000414558 ZDHHC16Q969W1 377 aa14.05□□□□□ -0.16
ATG4C-204ENST00000414558 PHF14O94880 888 aa14.04□□□□□ -0.16
ATG4C-204ENST00000414558 PTGER2P43116 358 aa14.04□□□□□ -0.16
ATG4C-204ENST00000414558 POTEEQ6S8J3 1075 aa14.04□□□□□ -0.16
ATG4C-204ENST00000414558 AXIN2Q9Y2T1 843 aa14.04□□□□□ -0.16
ATG4C-204ENST00000414558 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.16
ATG4C-204ENST00000414558 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
ATG4C-204ENST00000414558 PCDHGA10Q9Y5H3 936 aa14.03□□□□□ -0.16
ATG4C-204ENST00000414558 TYW1BQ6NUM6 668 aa14.02□□□□□ -0.17
ATG4C-204ENST00000414558 FBXW7Q969H0 707 aa14.02□□□□□ -0.17
ATG4C-204ENST00000414558 PLSCR2Q9NRY7 297 aa14.02□□□□□ -0.17
ATG4C-204ENST00000414558 EPAS1Q99814 870 aa14.01□□□□□ -0.17
ATG4C-204ENST00000414558 SPNS2Q8IVW8 549 aa14□□□□□ -0.17
ATG4C-204ENST00000414558 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
ATG4C-204ENST00000414558 KCNK17Q96T54 332 aa14□□□□□ -0.17
ATG4C-204ENST00000414558 PTPREP23469 700 aa13.99□□□□□ -0.17
ATG4C-204ENST00000414558 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
ATG4C-204ENST00000414558 DDX12PQ92771 950 aa13.99□□□□□ -0.17
ATG4C-204ENST00000414558 ADAM33Q9BZ11 813 aa13.98□□□□□ -0.17
ATG4C-204ENST00000414558 PSEN2P49810 448 aa13.97□□□□□ -0.17
ATG4C-204ENST00000414558 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
ATG4C-204ENST00000414558 NBR1Q14596 966 aa13.93□□□□□ -0.18
ATG4C-204ENST00000414558 DMRTA1Q5VZB9 504 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms