RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SOX12O15370 315 aa7.39□□□□□ -1.23
SF3B1-203ENST00000414174 PLA2G2EQ9NZK7 142 aa7.39□□□□□ -1.23
SF3B1-203ENST00000414174 CIZ1Q9ULV3 898 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-203ENST00000414174 PBX2P40425 430 aa7.38□□□□□ -1.23
SF3B1-203ENST00000414174 HCSTQ9UBK5 93 aa7.38□□□□□ -1.23
SF3B1-203ENST00000414174 TRIM41Q8WV44 630 aa7.36□□□□□ -1.23
SF3B1-203ENST00000414174 IFNLR1Q8IU57 520 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-203ENST00000414174 MS4A4AQ96JQ5 239 aa7.33□□□□□ -1.24
SF3B1-203ENST00000414174 KHSRPQ92945 711 aaKnown RBP eCLIP7.32□□□□□ -1.242e-19■□□□□ 9.4
SF3B1-203ENST00000414174 POTEEQ6S8J3 1075 aa7.29□□□□□ -1.24
SF3B1-203ENST00000414174 PHF8Q9UPP1 1060 aa7.27□□□□□ -1.25
SF3B1-203ENST00000414174 SLC34A2O95436 690 aa7.26□□□□□ -1.25
SF3B1-203ENST00000414174 KIF3CO14782 793 aa7.25□□□□□ -1.25
SF3B1-203ENST00000414174 RGS20O76081 388 aa7.25□□□□□ -1.25
SF3B1-203ENST00000414174 LHX6Q9UPM6 363 aa7.25□□□□□ -1.25
SF3B1-203ENST00000414174 AXIN2Q9Y2T1 843 aa7.25□□□□□ -1.25
SF3B1-203ENST00000414174 ARHGAP33O14559 1287 aa7.24□□□□□ -1.25
SF3B1-203ENST00000414174 RIOK3O14730 519 aaKnown RBP7.24□□□□□ -1.25
SF3B1-203ENST00000414174 NUDT7P0C024 238 aa7.24□□□□□ -1.25
SF3B1-203ENST00000414174 ADGRD1Q6QNK2 874 aa7.24□□□□□ -1.25
SF3B1-203ENST00000414174 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-203ENST00000414174 TK2O00142 265 aa7.23□□□□□ -1.25
SF3B1-203ENST00000414174 NLRP6P59044 892 aa7.23□□□□□ -1.25
SF3B1-203ENST00000414174 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-203ENST00000414174 VGFO15240 615 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-203ENST00000414174 ZFP91Q96JP5 570 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-203ENST00000414174 PCDHGA4Q9Y5G9 962 aa7.21□□□□□ -1.26
SF3B1-203ENST00000414174 HRO43593 1189 aa7.2□□□□□ -1.26
SF3B1-203ENST00000414174 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
SF3B1-203ENST00000414174 C2orf72A6NCS6 295 aa7.19□□□□□ -1.26
SF3B1-203ENST00000414174 IFFO2Q5TF58 517 aa7.18□□□□□ -1.26
SF3B1-203ENST00000414174 RNF25Q96BH1 459 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-203ENST00000414174 KDM4FA0A1W2PPD8 638 aa7.15□□□□□ -1.26
SF3B1-203ENST00000414174 IRX2Q9BZI1 471 aaPredicted RBP7.14□□□□□ -1.27
SF3B1-203ENST00000414174 KCTD12Q96CX2 325 aaKnown RBP7.13□□□□□ -1.27
SF3B1-203ENST00000414174 DMRTA1Q5VZB9 504 aa7.12□□□□□ -1.27
SF3B1-203ENST00000414174 STAC3Q96MF2 364 aa7.12□□□□□ -1.27
SF3B1-203ENST00000414174 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
SF3B1-203ENST00000414174 MFRPQ9BY79 579 aa7.11□□□□□ -1.27
SF3B1-203ENST00000414174 PSEN2P49810 448 aa7.1□□□□□ -1.27
SF3B1-203ENST00000414174 TMC2Q8TDI7 906 aa7.1□□□□□ -1.27
SF3B1-203ENST00000414174 PTCD2Q8WV60 388 aaKnown RBP7.1□□□□□ -1.27
SF3B1-203ENST00000414174 BCL11BQ9C0K0 894 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-203ENST00000414174 PPP4R3BQ5MIZ7 849 aa7.07□□□□□ -1.28
SF3B1-203ENST00000414174 A0A0G2JS52 829 aa7.05□□□□□ -1.28
SF3B1-203ENST00000414174 PTPN5P54829 565 aa7.04□□□□□ -1.28
SF3B1-203ENST00000414174 SLC4A5Q9BY07 1137 aa7.04□□□□□ -1.28
SF3B1-203ENST00000414174 VPS9D1Q9Y2B5 631 aa7.04□□□□□ -1.28
SF3B1-203ENST00000414174 STK24Q9Y6E0 443 aa7.04□□□□□ -1.28
SF3B1-203ENST00000414174 KCNH8Q96L42 1107 aa7.03□□□□□ -1.28
SF3B1-203ENST00000414174 TBC1D12O60347 775 aa7.02□□□□□ -1.29
SF3B1-203ENST00000414174 PKD2Q13563 968 aa7.01□□□□□ -1.29
SF3B1-203ENST00000414174 BHMG1C9JSJ3 638 aaPredicted RBP7□□□□□ -1.29
SF3B1-203ENST00000414174 THSD4Q6ZMP0 1018 aa7□□□□□ -1.29
SF3B1-203ENST00000414174 FOXK1P85037 733 aa6.99□□□□□ -1.29
SF3B1-203ENST00000414174 KCNK17Q96T54 332 aa6.99□□□□□ -1.29
SF3B1-203ENST00000414174 STK25O00506 426 aa6.98□□□□□ -1.29
SF3B1-203ENST00000414174 PLPP6Q8IY26 295 aa6.96□□□□□ -1.3
SF3B1-203ENST00000414174 GPHNQ9NQX3 736 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-203ENST00000414174 WNT2BQ93097 391 aa6.95□□□□□ -1.3
SF3B1-203ENST00000414174 BCL2L12Q9HB09 334 aa6.95□□□□□ -1.3
SF3B1-203ENST00000414174 GOLGA8CPA6NN73 597 aa6.94□□□□□ -1.3
SF3B1-203ENST00000414174 RGL2O15211 777 aa6.94□□□□□ -1.3
SF3B1-203ENST00000414174 PPP1R37O75864 691 aa6.94□□□□□ -1.3
SF3B1-203ENST00000414174 ECM2O94769 699 aaPredicted RBP6.93□□□□□ -1.3
SF3B1-203ENST00000414174 Q6ZNB5 142 aa6.93□□□□□ -1.3
SF3B1-203ENST00000414174 ITGBL1O95965 494 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-203ENST00000414174 MRPL50Q8N5N7 158 aaKnown RBP6.92□□□□□ -1.3
SF3B1-203ENST00000414174 ZBED2Q9BTP6 218 aa6.91□□□□□ -1.3
SF3B1-203ENST00000414174 PTPREP23469 700 aa6.9□□□□□ -1.3
SF3B1-203ENST00000414174 DSG2Q14126 1118 aa6.9□□□□□ -1.3
SF3B1-203ENST00000414174 LAPTM4AQ15012 233 aa6.9□□□□□ -1.3
SF3B1-203ENST00000414174 ZNF454Q8N9F8 522 aa6.89□□□□□ -1.31
SF3B1-203ENST00000414174 OXER1Q8TDS5 423 aa6.89□□□□□ -1.31
SF3B1-203ENST00000414174 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
SF3B1-203ENST00000414174 FOSBP53539 338 aa6.87□□□□□ -1.31
SF3B1-203ENST00000414174 ANO8Q9HCE9 1232 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-203ENST00000414174 NYAP1Q6ZVC0 841 aa6.85□□□□□ -1.31
SF3B1-203ENST00000414174 TRAF7Q6Q0C0 670 aa6.84□□□□□ -1.31
SF3B1-203ENST00000414174 ANKK1Q8NFD2 765 aa6.82□□□□□ -1.32
SF3B1-203ENST00000414174 JPH4Q96JJ6 628 aa6.82□□□□□ -1.32
SF3B1-203ENST00000414174 DAXXQ9UER7 740 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-203ENST00000414174 LCE2BO14633 110 aa6.81□□□□□ -1.32
SF3B1-203ENST00000414174 KCNC4Q03721 635 aa6.81□□□□□ -1.32
SF3B1-203ENST00000414174 ZDHHC16Q969W1 377 aa6.81□□□□□ -1.32
SF3B1-203ENST00000414174 RABGEF1Q9UJ41 708 aa6.81□□□□□ -1.32
SF3B1-203ENST00000414174 LAPTM4BQ86VI4 370 aa6.8□□□□□ -1.32
SF3B1-203ENST00000414174 SOWAHBA6NEL2 793 aa6.79□□□□□ -1.32
SF3B1-203ENST00000414174 GFRA3O60609 400 aa6.79□□□□□ -1.32
SF3B1-203ENST00000414174 ADAM33Q9BZ11 813 aa6.79□□□□□ -1.32
SF3B1-203ENST00000414174 UPF1Q92900 1129 aaKnown RBP eCLIP6.78□□□□□ -1.32
SF3B1-203ENST00000414174 TTBK1Q5TCY1 1321 aaPredicted RBP6.77□□□□□ -1.32
SF3B1-203ENST00000414174 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
SF3B1-203ENST00000414174 ONECUT3O60422 494 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-203ENST00000414174 HS6ST3Q8IZP7 471 aa6.76□□□□□ -1.33
SF3B1-203ENST00000414174 EVI5O60447 810 aa6.75□□□□□ -1.33
SF3B1-203ENST00000414174 BCAMP50895 628 aa6.75□□□□□ -1.33
SF3B1-203ENST00000414174 MYT1Q01538 1121 aa6.75□□□□□ -1.33
SF3B1-203ENST00000414174 CRISPLD2Q9H0B8 497 aa6.75□□□□□ -1.33
SF3B1-203ENST00000414174 NRG2O14511 850 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms