RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
NOD1-203ENST00000413433 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
NOD1-203ENST00000413433 PSEN1P49768 467 aa11.05□□□□□ -0.64
NOD1-203ENST00000413433 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
NOD1-203ENST00000413433 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
NOD1-203ENST00000413433 G3V3G9 751 aa11.01□□□□□ -0.65
NOD1-203ENST00000413433 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
NOD1-203ENST00000413433 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
NOD1-203ENST00000413433 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
NOD1-203ENST00000413433 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
NOD1-203ENST00000413433 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
NOD1-203ENST00000413433 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
NOD1-203ENST00000413433 BOLA1Q9Y3E2 137 aa10.95□□□□□ -0.66
NOD1-203ENST00000413433 HOXB1P14653 301 aaPredicted RBP10.94□□□□□ -0.66
NOD1-203ENST00000413433 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
NOD1-203ENST00000413433 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
NOD1-203ENST00000413433 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
NOD1-203ENST00000413433 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
NOD1-203ENST00000413433 ERBB3P21860 1342 aa10.91□□□□□ -0.66
NOD1-203ENST00000413433 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
NOD1-203ENST00000413433 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
NOD1-203ENST00000413433 STK25O00506 426 aa10.88□□□□□ -0.67
NOD1-203ENST00000413433 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
NOD1-203ENST00000413433 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
NOD1-203ENST00000413433 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
NOD1-203ENST00000413433 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
NOD1-203ENST00000413433 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
NOD1-203ENST00000413433 ARXQ96QS3 562 aa10.86□□□□□ -0.67
NOD1-203ENST00000413433 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
NOD1-203ENST00000413433 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
NOD1-203ENST00000413433 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
NOD1-203ENST00000413433 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
NOD1-203ENST00000413433 VARS2Q5ST30 1063 aaKnown RBP10.8□□□□□ -0.68
NOD1-203ENST00000413433 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
NOD1-203ENST00000413433 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
NOD1-203ENST00000413433 C14orf37Q86TY3 774 aa10.76□□□□□ -0.69
NOD1-203ENST00000413433 ZNF687Q8N1G0 1237 aa10.76□□□□□ -0.69
NOD1-203ENST00000413433 PTGER2P43116 358 aa10.75□□□□□ -0.69
NOD1-203ENST00000413433 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
NOD1-203ENST00000413433 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
NOD1-203ENST00000413433 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
NOD1-203ENST00000413433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.71□□□□□ -0.69
NOD1-203ENST00000413433 ZFP91Q96JP5 570 aaPredicted RBP10.71□□□□□ -0.69
NOD1-203ENST00000413433 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
NOD1-203ENST00000413433 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
NOD1-203ENST00000413433 GPR153Q6NV75 609 aa10.69□□□□□ -0.7
NOD1-203ENST00000413433 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
NOD1-203ENST00000413433 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
NOD1-203ENST00000413433 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
NOD1-203ENST00000413433 SOX12O15370 315 aa10.64□□□□□ -0.71
NOD1-203ENST00000413433 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
NOD1-203ENST00000413433 KCNV2Q8TDN2 545 aa10.62□□□□□ -0.71
NOD1-203ENST00000413433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
NOD1-203ENST00000413433 ARSIQ5FYB1 569 aa10.59□□□□□ -0.71
NOD1-203ENST00000413433 MS4A4AQ96JQ5 239 aa10.58□□□□□ -0.72
NOD1-203ENST00000413433 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
NOD1-203ENST00000413433 LSM11P83369 360 aaKnown RBP eCLIP10.56□□□□□ -0.72
NOD1-203ENST00000413433 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
NOD1-203ENST00000413433 BRPF1P55201 1214 aaPredicted RBP10.53□□□□□ -0.72
NOD1-203ENST00000413433 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
NOD1-203ENST00000413433 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
NOD1-203ENST00000413433 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
NOD1-203ENST00000413433 MFRPQ9BY79 579 aa10.51□□□□□ -0.73
NOD1-203ENST00000413433 PBX2P40425 430 aa10.5□□□□□ -0.73
NOD1-203ENST00000413433 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
NOD1-203ENST00000413433 RB1CC1Q8TDY2 1594 aa10.48□□□□□ -0.73
NOD1-203ENST00000413433 NLRP6P59044 892 aa10.46□□□□□ -0.73
NOD1-203ENST00000413433 PLA2G2EQ9NZK7 142 aa10.46□□□□□ -0.73
NOD1-203ENST00000413433 ZC3H15Q8WU90 426 aaKnown RBP10.45□□□□□ -0.74
NOD1-203ENST00000413433 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
NOD1-203ENST00000413433 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
NOD1-203ENST00000413433 NUDT7P0C024 238 aa10.41□□□□□ -0.74
NOD1-203ENST00000413433 E2F4Q16254 413 aa10.4□□□□□ -0.74
NOD1-203ENST00000413433 SLC24A3Q9HC58 644 aa10.4□□□□□ -0.74
NOD1-203ENST00000413433 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
NOD1-203ENST00000413433 KIF3CO14782 793 aa10.38□□□□□ -0.75
NOD1-203ENST00000413433 POTEEQ6S8J3 1075 aa10.38□□□□□ -0.75
NOD1-203ENST00000413433 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
NOD1-203ENST00000413433 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
NOD1-203ENST00000413433 C2orf72A6NCS6 295 aa10.37□□□□□ -0.75
NOD1-203ENST00000413433 NACADO15069 1562 aa10.37□□□□□ -0.75
NOD1-203ENST00000413433 SLC34A2O95436 690 aa10.37□□□□□ -0.75
NOD1-203ENST00000413433 PPP1R37O75864 691 aa10.36□□□□□ -0.75
NOD1-203ENST00000413433 PCDHGA4Q9Y5G9 962 aa10.36□□□□□ -0.75
NOD1-203ENST00000413433 TESPA1A2RU30 521 aaPredicted RBP10.35□□□□□ -0.75
NOD1-203ENST00000413433 SEMA3EO15041 775 aa10.35□□□□□ -0.75
NOD1-203ENST00000413433 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
NOD1-203ENST00000413433 ADGRD1Q6QNK2 874 aa10.34□□□□□ -0.75
NOD1-203ENST00000413433 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
NOD1-203ENST00000413433 ARHGAP33O14559 1287 aa10.32□□□□□ -0.76
NOD1-203ENST00000413433 TK2O00142 265 aa10.29□□□□□ -0.76
NOD1-203ENST00000413433 TMC2Q8TDI7 906 aa10.29□□□□□ -0.76
NOD1-203ENST00000413433 ZMYND10O75800 440 aa10.27□□□□□ -0.77
NOD1-203ENST00000413433 HRO43593 1189 aa10.24□□□□□ -0.77
NOD1-203ENST00000413433 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
NOD1-203ENST00000413433 LARP6Q9BRS8 491 aaKnown RBP10.22□□□□□ -0.77
NOD1-203ENST00000413433 BARGINQ6ZT62 677 aa10.21□□□□□ -0.77
NOD1-203ENST00000413433 PDE4AP27815 886 aa10.2□□□□□ -0.78
NOD1-203ENST00000413433 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
NOD1-203ENST00000413433 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms