RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
MCF2L-211ENST00000413354 CDC42BPBQ9Y5S2 1711 aa25.15■■□□□ 1.62
MCF2L-211ENST00000413354 POGZQ7Z3K3 1410 aa25.13■■□□□ 1.61
MCF2L-211ENST00000413354 SCAPERQ9BY12 1400 aa25.13■■□□□ 1.61
MCF2L-211ENST00000413354 CDC42BPAQ5VT25 1732 aa25.12■■□□□ 1.61
MCF2L-211ENST00000413354 MAGI2Q86UL8 1455 aa25.11■■□□□ 1.61
MCF2L-211ENST00000413354 ZFYVE16Q7Z3T8 1539 aa25.09■■□□□ 1.61
MCF2L-211ENST00000413354 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
MCF2L-211ENST00000413354 MTUS2Q5JR59 1369 aa25.07■■□□□ 1.6
MCF2L-211ENST00000413354 EHBP1L1Q8N3D4 1523 aa25.07■■□□□ 1.6
MCF2L-211ENST00000413354 ZNF518AQ6AHZ1 1483 aa25.06■■□□□ 1.6
MCF2L-211ENST00000413354 ABCC1P33527 1531 aa25.03■■□□□ 1.6
MCF2L-211ENST00000413354 BCORL1Q5H9F3 1711 aa25.03■■□□□ 1.6
MCF2L-211ENST00000413354 KDM5CP41229 1560 aa25.02■■□□□ 1.6
MCF2L-211ENST00000413354 ITSN2Q9NZM3 1697 aa25.02■■□□□ 1.6
MCF2L-211ENST00000413354 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
MCF2L-211ENST00000413354 ADAMTSL3P82987 1691 aa25.01■■□□□ 1.59
MCF2L-211ENST00000413354 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
MCF2L-211ENST00000413354 HECW2Q9P2P5 1572 aa24.98■■□□□ 1.59
MCF2L-211ENST00000413354 GPATCH8Q9UKJ3 1502 aaKnown RBP24.98■■□□□ 1.59
MCF2L-211ENST00000413354 ARID4BQ4LE39 1312 aaPredicted RBP24.98■■□□□ 1.59
MCF2L-211ENST00000413354 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
MCF2L-211ENST00000413354 TIAM1Q13009 1591 aa24.96■■□□□ 1.59
MCF2L-211ENST00000413354 SAMD9LQ8IVG5 1584 aa24.95■■□□□ 1.58
MCF2L-211ENST00000413354 SUPT6HQ7KZ85 1726 aaKnown RBP24.94■■□□□ 1.58
MCF2L-211ENST00000413354 ATP10AO60312 1499 aa24.93■■□□□ 1.58
MCF2L-211ENST00000413354 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
MCF2L-211ENST00000413354 PLEKHH2Q8IVE3 1493 aa24.92■■□□□ 1.58
MCF2L-211ENST00000413354 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
MCF2L-211ENST00000413354 MADDQ8WXG6 1647 aa24.91■■□□□ 1.58
MCF2L-211ENST00000413354 MLH3Q9UHC1 1453 aa24.9■■□□□ 1.58
MCF2L-211ENST00000413354 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
MCF2L-211ENST00000413354 AFAP1Q8N556 730 aa24.9■■□□□ 1.58
MCF2L-211ENST00000413354 CFDP1Q9UEE9 299 aaPredicted RBP24.9■■□□□ 1.58
MCF2L-211ENST00000413354 SYCP2Q9BX26 1530 aa24.9■■□□□ 1.58
MCF2L-211ENST00000413354 TRAPPC8Q9Y2L5 1435 aa24.89■■□□□ 1.58
MCF2L-211ENST00000413354 ZNF777Q9ULD5 760 aaPredicted RBP24.88■■□□□ 1.57
MCF2L-211ENST00000413354 DIP2CQ9Y2E4 1556 aa24.88■■□□□ 1.57
MCF2L-211ENST00000413354 KIAA1107Q9UPP5 1409 aa24.87■■□□□ 1.57
MCF2L-211ENST00000413354 MAP3K1Q13233 1512 aa24.87■■□□□ 1.57
MCF2L-211ENST00000413354 MYT1LQ9UL68 1186 aa24.87■■□□□ 1.57
MCF2L-211ENST00000413354 REREQ9P2R6 1566 aa24.87■■□□□ 1.57
MCF2L-211ENST00000413354 PTPRMP28827 1452 aa24.86■■□□□ 1.57
MCF2L-211ENST00000413354 ABCA6Q8N139 1617 aa24.86■■□□□ 1.57
MCF2L-211ENST00000413354 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
MCF2L-211ENST00000413354 NCOA2Q15596 1464 aa24.84■■□□□ 1.57
MCF2L-211ENST00000413354 KIDINS220Q9ULH0 1771 aa24.84■■□□□ 1.57
MCF2L-211ENST00000413354 FER1L4A9Z1Z3 1794 aa24.83■■□□□ 1.57
MCF2L-211ENST00000413354 LRRC9Q6ZRR7 1453 aa24.83■■□□□ 1.56
MCF2L-211ENST00000413354 ATP7AQ04656 1500 aa24.76■■□□□ 1.55
MCF2L-211ENST00000413354 INO80Q9ULG1 1556 aaPredicted RBP24.76■■□□□ 1.55
MCF2L-211ENST00000413354 HNRNPMP52272 730 aaKnown RBP eCLIP24.76■■□□□ 1.55
MCF2L-211ENST00000413354 SPAG9O60271 1321 aaKnown RBP24.76■■□□□ 1.55
MCF2L-211ENST00000413354 AGLP35573 1532 aa24.76■■□□□ 1.55
MCF2L-211ENST00000413354 MLECQ14165 292 aa24.74■■□□□ 1.55
MCF2L-211ENST00000413354 APLP2Q06481 763 aa24.72■■□□□ 1.55
MCF2L-211ENST00000413354 CAMSAP2Q08AD1 1489 aa24.71■■□□□ 1.55
MCF2L-211ENST00000413354 MBD5Q9P267 1494 aa24.7■■□□□ 1.55
MCF2L-211ENST00000413354 ZNF644Q9H582 1327 aaPredicted RBP24.69■■□□□ 1.54
MCF2L-211ENST00000413354 ADGBQ8N7X0 1667 aa24.69■■□□□ 1.54
MCF2L-211ENST00000413354 CCDC141Q6ZP82 1450 aa24.67■■□□□ 1.54
MCF2L-211ENST00000413354 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
MCF2L-211ENST00000413354 PLXNC1O60486 1568 aa24.65■■□□□ 1.54
MCF2L-211ENST00000413354 ARHGEF5Q12774 1597 aa24.65■■□□□ 1.54
MCF2L-211ENST00000413354 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
MCF2L-211ENST00000413354 RSPH4AQ5TD94 716 aa24.64■■□□□ 1.54
MCF2L-211ENST00000413354 MYOM3Q5VTT5 1437 aa24.63■■□□□ 1.53
MCF2L-211ENST00000413354 A2MP01023 1474 aa24.63■■□□□ 1.53
MCF2L-211ENST00000413354 MIA2Q96PC5 1412 aa24.62■■□□□ 1.53
MCF2L-211ENST00000413354 ESF1Q9H501 851 aaKnown RBP24.58■■□□□ 1.53
MCF2L-211ENST00000413354 CNTLNQ9NXG0 1405 aa24.58■■□□□ 1.53
MCF2L-211ENST00000413354 PLPPR3Q6T4P5 718 aa24.57■■□□□ 1.52
MCF2L-211ENST00000413354 LMTK3Q96Q04 1460 aa24.57■■□□□ 1.52
MCF2L-211ENST00000413354 SETD1BQ9UPS6 1966 aaKnown RBP24.55■■□□□ 1.52
MCF2L-211ENST00000413354 MROH2AA6NES4 1674 aa24.55■■□□□ 1.52
MCF2L-211ENST00000413354 C3P01024 1663 aa24.55■■□□□ 1.52
MCF2L-211ENST00000413354 PREX1Q8TCU6 1659 aa24.55■■□□□ 1.52
MCF2L-211ENST00000413354 MAST1Q9Y2H9 1570 aa24.53■■□□□ 1.52
MCF2L-211ENST00000413354 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
MCF2L-211ENST00000413354 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
MCF2L-211ENST00000413354 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
MCF2L-211ENST00000413354 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
MCF2L-211ENST00000413354 CLTCQ00610 1675 aaKnown RBP24.47■■□□□ 1.51
MCF2L-211ENST00000413354 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
MCF2L-211ENST00000413354 CROCC2H7BZ55 1655 aa24.46■■□□□ 1.51
MCF2L-211ENST00000413354 FGD6Q6ZV73 1430 aa24.45■■□□□ 1.51
MCF2L-211ENST00000413354 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
MCF2L-211ENST00000413354 FAM135AQ9P2D6 1515 aa24.44■■□□□ 1.5
MCF2L-211ENST00000413354 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
MCF2L-211ENST00000413354 GGT6Q6P531 493 aa24.42■■□□□ 1.5
MCF2L-211ENST00000413354 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
MCF2L-211ENST00000413354 SHANK2Q9UPX8 1470 aa24.42■■□□□ 1.5
MCF2L-211ENST00000413354 DNMT1P26358 1616 aaKnown RBP24.4■■□□□ 1.5
MCF2L-211ENST00000413354 NPATQ14207 1427 aa24.4■■□□□ 1.5
MCF2L-211ENST00000413354 EIF2AK4Q9P2K8 1649 aaKnown RBP24.39■■□□□ 1.5
MCF2L-211ENST00000413354 ZMYM3Q14202 1370 aa24.39■■□□□ 1.49
MCF2L-211ENST00000413354 KIF3BO15066 747 aa24.37■■□□□ 1.49
MCF2L-211ENST00000413354 KDM5DQ9BY66 1539 aa24.36■■□□□ 1.49
MCF2L-211ENST00000413354 HSPA2P54652 639 aa24.36■■□□□ 1.49
MCF2L-211ENST00000413354 RNF17Q9BXT8 1623 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms