RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
HMGB3P31-201ENST00000413333 ILDR1Q86SU0 546 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P31-201ENST00000413333 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P31-201ENST00000413333 ZMYND10O75800 440 aa9.72□□□□□ -0.85
HMGB3P31-201ENST00000413333 DPYSL4O14531 572 aa9.71□□□□□ -0.86
HMGB3P31-201ENST00000413333 DSG2Q14126 1118 aa9.71□□□□□ -0.86
HMGB3P31-201ENST00000413333 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
HMGB3P31-201ENST00000413333 MICALL2Q8IY33 904 aa9.71□□□□□ -0.86
HMGB3P31-201ENST00000413333 HAX1O00165 279 aa9.7□□□□□ -0.86
HMGB3P31-201ENST00000413333 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
HMGB3P31-201ENST00000413333 EMILIN3Q9NT22 766 aa9.69□□□□□ -0.86
HMGB3P31-201ENST00000413333 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
HMGB3P31-201ENST00000413333 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
HMGB3P31-201ENST00000413333 BARGINQ6ZT62 677 aa9.67□□□□□ -0.86
HMGB3P31-201ENST00000413333 G3V3G9 751 aa9.66□□□□□ -0.86
HMGB3P31-201ENST00000413333 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
HMGB3P31-201ENST00000413333 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
HMGB3P31-201ENST00000413333 EVX2Q03828 476 aa9.65□□□□□ -0.86
HMGB3P31-201ENST00000413333 ERICH6Q7L0X2 663 aa9.65□□□□□ -0.86
HMGB3P31-201ENST00000413333 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
HMGB3P31-201ENST00000413333 FOXK1P85037 733 aa9.64□□□□□ -0.87
HMGB3P31-201ENST00000413333 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
HMGB3P31-201ENST00000413333 PLPP6Q8IY26 295 aa9.63□□□□□ -0.87
HMGB3P31-201ENST00000413333 OCEL1Q9H607 264 aa9.63□□□□□ -0.87
HMGB3P31-201ENST00000413333 BOLA1Q9Y3E2 137 aa9.63□□□□□ -0.87
HMGB3P31-201ENST00000413333 ATMINO43313 823 aaPredicted RBP9.62□□□□□ -0.87
HMGB3P31-201ENST00000413333 CLCN6P51797 869 aa9.62□□□□□ -0.87
HMGB3P31-201ENST00000413333 PDIA6Q15084 440 aa9.62□□□□□ -0.87
HMGB3P31-201ENST00000413333 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
HMGB3P31-201ENST00000413333 C2orf72A6NCS6 295 aa9.61□□□□□ -0.87
HMGB3P31-201ENST00000413333 AK7Q96M32 723 aa9.61□□□□□ -0.87
HMGB3P31-201ENST00000413333 PLCG2P16885 1265 aa9.59□□□□□ -0.87
HMGB3P31-201ENST00000413333 MAP3K9P80192 1104 aa9.59□□□□□ -0.87
HMGB3P31-201ENST00000413333 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
HMGB3P31-201ENST00000413333 IER5LQ5T953 404 aa9.58□□□□□ -0.88
HMGB3P31-201ENST00000413333 ASTLQ6HA08 431 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P31-201ENST00000413333 TMEM121BQ9BXQ6 578 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P31-201ENST00000413333 UPF1Q92900 1129 aaKnown RBP eCLIP9.56□□□□□ -0.88
HMGB3P31-201ENST00000413333 GPBP1L1Q9HC44 474 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P31-201ENST00000413333 KIF3CO14782 793 aa9.55□□□□□ -0.88
HMGB3P31-201ENST00000413333 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
HMGB3P31-201ENST00000413333 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
HMGB3P31-201ENST00000413333 SEC24BO95487 1268 aa9.52□□□□□ -0.89
HMGB3P31-201ENST00000413333 TRIM66O15016 1216 aa9.51□□□□□ -0.89
HMGB3P31-201ENST00000413333 PDE4DQ08499 809 aa9.5□□□□□ -0.89
HMGB3P31-201ENST00000413333 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
HMGB3P31-201ENST00000413333 IL27Q8NEV9 243 aa9.5□□□□□ -0.89
HMGB3P31-201ENST00000413333 GPR37O15354 613 aa9.49□□□□□ -0.89
HMGB3P31-201ENST00000413333 KDM4CQ9H3R0 1056 aa9.49□□□□□ -0.89
HMGB3P31-201ENST00000413333 TBC1D12O60347 775 aa9.48□□□□□ -0.89
HMGB3P31-201ENST00000413333 GABBR2O75899 941 aa9.48□□□□□ -0.89
HMGB3P31-201ENST00000413333 DDX12PQ92771 950 aa9.48□□□□□ -0.89
HMGB3P31-201ENST00000413333 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
HMGB3P31-201ENST00000413333 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
HMGB3P31-201ENST00000413333 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
HMGB3P31-201ENST00000413333 COLQQ9Y215 455 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P31-201ENST00000413333 OSBPP22059 807 aa9.46□□□□□ -0.9
HMGB3P31-201ENST00000413333 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P31-201ENST00000413333 MINK1Q8N4C8 1332 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P31-201ENST00000413333 EVI5O60447 810 aa9.43□□□□□ -0.9
HMGB3P31-201ENST00000413333 GNPATO15228 680 aa9.42□□□□□ -0.9
HMGB3P31-201ENST00000413333 PTGER2P43116 358 aa9.42□□□□□ -0.9
HMGB3P31-201ENST00000413333 MAP2K5Q13163 448 aa9.42□□□□□ -0.9
HMGB3P31-201ENST00000413333 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
HMGB3P31-201ENST00000413333 FCHSD2O94868 740 aa9.41□□□□□ -0.9
HMGB3P31-201ENST00000413333 SLC39A7Q92504 469 aa9.41□□□□□ -0.9
HMGB3P31-201ENST00000413333 ZNF316A6NFI3 1004 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P31-201ENST00000413333 IRF6O14896 467 aa9.4□□□□□ -0.9
HMGB3P31-201ENST00000413333 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.9
HMGB3P31-201ENST00000413333 FECHP22830 423 aa9.39□□□□□ -0.91
HMGB3P31-201ENST00000413333 HIC1Q14526 733 aa9.39□□□□□ -0.91
HMGB3P31-201ENST00000413333 POTEFA5A3E0 1075 aa9.38□□□□□ -0.91
HMGB3P31-201ENST00000413333 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
HMGB3P31-201ENST00000413333 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
HMGB3P31-201ENST00000413333 C7P10643 843 aa9.37□□□□□ -0.91
HMGB3P31-201ENST00000413333 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
HMGB3P31-201ENST00000413333 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
HMGB3P31-201ENST00000413333 METRNQ9UJH8 293 aa9.36□□□□□ -0.91
HMGB3P31-201ENST00000413333 PTGDRQ13258 359 aa9.34□□□□□ -0.91
HMGB3P31-201ENST00000413333 AMHR2Q16671 573 aa9.34□□□□□ -0.91
HMGB3P31-201ENST00000413333 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
HMGB3P31-201ENST00000413333 TTLL12Q14166 644 aaPredicted RBP9.33□□□□□ -0.92
HMGB3P31-201ENST00000413333 RBM33Q96EV2 1170 aaKnown RBP9.32□□□□□ -0.92
HMGB3P31-201ENST00000413333 DDRGK1Q96HY6 314 aa9.32□□□□□ -0.92
HMGB3P31-201ENST00000413333 ARXQ96QS3 562 aa9.32□□□□□ -0.92
HMGB3P31-201ENST00000413333 CDHR5Q9HBB8 845 aa9.31□□□□□ -0.92
HMGB3P31-201ENST00000413333 PLEKHG3A1L390 1219 aa9.3□□□□□ -0.92
HMGB3P31-201ENST00000413333 MAP3K7O43318 606 aa9.3□□□□□ -0.92
HMGB3P31-201ENST00000413333 SLC34A2O95436 690 aa9.3□□□□□ -0.92
HMGB3P31-201ENST00000413333 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
HMGB3P31-201ENST00000413333 PHF14O94880 888 aa9.29□□□□□ -0.92
HMGB3P31-201ENST00000413333 EPAS1Q99814 870 aa9.29□□□□□ -0.92
HMGB3P31-201ENST00000413333 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P31-201ENST00000413333 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
HMGB3P31-201ENST00000413333 POTEIP0CG38 1075 aa9.27□□□□□ -0.93
HMGB3P31-201ENST00000413333 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
HMGB3P31-201ENST00000413333 NPDC1Q9NQX5 325 aaPredicted RBP9.26□□□□□ -0.93
HMGB3P31-201ENST00000413333 PCDHGA4Q9Y5G9 962 aa9.26□□□□□ -0.93
HMGB3P31-201ENST00000413333 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
HMGB3P31-201ENST00000413333 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms