RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 TSPOAP1O95153 1857 aa23.12■■□□□ 1.29
PUDP-202ENST00000412827 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
PUDP-202ENST00000412827 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
PUDP-202ENST00000412827 FANCAO15360 1455 aa23.12■■□□□ 1.29
PUDP-202ENST00000412827 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
PUDP-202ENST00000412827 PPRC1Q5VV67 1664 aaKnown RBP23.1■■□□□ 1.29
PUDP-202ENST00000412827 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
PUDP-202ENST00000412827 EFCAB2Q5VUJ9 269 aa23.09■■□□□ 1.29
PUDP-202ENST00000412827 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
PUDP-202ENST00000412827 CDC42BPBQ9Y5S2 1711 aa23.06■■□□□ 1.28
PUDP-202ENST00000412827 MIA2Q96PC5 1412 aa23.05■■□□□ 1.28
PUDP-202ENST00000412827 PLEKHH2Q8IVE3 1493 aa23.04■■□□□ 1.28
PUDP-202ENST00000412827 AKNAQ7Z591 1439 aa23.01■■□□□ 1.27
PUDP-202ENST00000412827 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
PUDP-202ENST00000412827 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
PUDP-202ENST00000412827 FGD6Q6ZV73 1430 aa22.99■■□□□ 1.27
PUDP-202ENST00000412827 ABCC1P33527 1531 aa22.99■■□□□ 1.27
PUDP-202ENST00000412827 SAMD9LQ8IVG5 1584 aa22.97■■□□□ 1.27
PUDP-202ENST00000412827 KDM6BO15054 1643 aa22.97■■□□□ 1.27
PUDP-202ENST00000412827 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
PUDP-202ENST00000412827 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
PUDP-202ENST00000412827 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
PUDP-202ENST00000412827 DENND4BO75064 1496 aaPredicted RBP22.94■■□□□ 1.26
PUDP-202ENST00000412827 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
PUDP-202ENST00000412827 SCAPERQ9BY12 1400 aa22.93■■□□□ 1.26
PUDP-202ENST00000412827 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
PUDP-202ENST00000412827 POGZQ7Z3K3 1410 aa22.92■■□□□ 1.26
PUDP-202ENST00000412827 TCOF1Q13428 1488 aaKnown RBP22.91■■□□□ 1.26
PUDP-202ENST00000412827 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
PUDP-202ENST00000412827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.9■■□□□ 1.26
PUDP-202ENST00000412827 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
PUDP-202ENST00000412827 ARHGEF5Q12774 1597 aa22.86■■□□□ 1.25
PUDP-202ENST00000412827 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
PUDP-202ENST00000412827 RICTORQ6R327 1708 aa22.84■■□□□ 1.25
PUDP-202ENST00000412827 ZNF644Q9H582 1327 aaPredicted RBP22.84■■□□□ 1.25
PUDP-202ENST00000412827 ZMYM4Q5VZL5 1548 aa22.84■■□□□ 1.25
PUDP-202ENST00000412827 ARHGEF12Q9NZN5 1544 aa22.83■■□□□ 1.25
PUDP-202ENST00000412827 KDM5CP41229 1560 aa22.83■■□□□ 1.24
PUDP-202ENST00000412827 FAM50AQ14320 339 aaKnown RBP22.82■■□□□ 1.24
PUDP-202ENST00000412827 MBD5Q9P267 1494 aa22.82■■□□□ 1.24
PUDP-202ENST00000412827 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
PUDP-202ENST00000412827 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
PUDP-202ENST00000412827 TRAPPC8Q9Y2L5 1435 aa22.81■■□□□ 1.24
PUDP-202ENST00000412827 MAGI2Q86UL8 1455 aa22.8■■□□□ 1.24
PUDP-202ENST00000412827 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
PUDP-202ENST00000412827 RAPGEF3O95398 923 aa22.79■■□□□ 1.24
PUDP-202ENST00000412827 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
PUDP-202ENST00000412827 HECW2Q9P2P5 1572 aa22.79■■□□□ 1.24
PUDP-202ENST00000412827 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
PUDP-202ENST00000412827 DAPK1P53355 1430 aa22.76■■□□□ 1.23
PUDP-202ENST00000412827 MLH3Q9UHC1 1453 aa22.76■■□□□ 1.23
PUDP-202ENST00000412827 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
PUDP-202ENST00000412827 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
PUDP-202ENST00000412827 SPAG9O60271 1321 aaKnown RBP22.75■■□□□ 1.23
PUDP-202ENST00000412827 CROCC2H7BZ55 1655 aa22.75■■□□□ 1.23
PUDP-202ENST00000412827 ZFYVE16Q7Z3T8 1539 aa22.75■■□□□ 1.23
PUDP-202ENST00000412827 AFAP1Q8N556 730 aa22.75■■□□□ 1.23
PUDP-202ENST00000412827 ARHGEF40Q8TER5 1519 aa22.74■■□□□ 1.23
PUDP-202ENST00000412827 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
PUDP-202ENST00000412827 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
PUDP-202ENST00000412827 ATP7AQ04656 1500 aa22.73■■□□□ 1.23
PUDP-202ENST00000412827 MAST1Q9Y2H9 1570 aa22.73■■□□□ 1.23
PUDP-202ENST00000412827 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
PUDP-202ENST00000412827 C9orf84Q5VXU9 1444 aa22.72■■□□□ 1.23
PUDP-202ENST00000412827 ABCC5O15440 1437 aa22.72■■□□□ 1.23
PUDP-202ENST00000412827 PLXNC1O60486 1568 aa22.66■■□□□ 1.22
PUDP-202ENST00000412827 KIDINS220Q9ULH0 1771 aa22.66■■□□□ 1.22
PUDP-202ENST00000412827 ADGBQ8N7X0 1667 aa22.66■■□□□ 1.22
PUDP-202ENST00000412827 DIP2CQ9Y2E4 1556 aa22.64■■□□□ 1.21
PUDP-202ENST00000412827 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.21
PUDP-202ENST00000412827 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
PUDP-202ENST00000412827 ABCA6Q8N139 1617 aa22.63■■□□□ 1.21
PUDP-202ENST00000412827 YEATS2Q9ULM3 1422 aa22.63■■□□□ 1.21
PUDP-202ENST00000412827 ATP10AO60312 1499 aa22.62■■□□□ 1.21
PUDP-202ENST00000412827 REREQ9P2R6 1566 aa22.62■■□□□ 1.21
PUDP-202ENST00000412827 ITGAEP38570 1179 aa22.61■■□□□ 1.21
PUDP-202ENST00000412827 ROCK1Q13464 1354 aa22.61■■□□□ 1.21
PUDP-202ENST00000412827 KIF15Q9NS87 1388 aa22.58■■□□□ 1.21
PUDP-202ENST00000412827 A2MP01023 1474 aa22.57■■□□□ 1.2
PUDP-202ENST00000412827 DUOX2Q9NRD8 1548 aa22.57■■□□□ 1.2
PUDP-202ENST00000412827 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
PUDP-202ENST00000412827 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
PUDP-202ENST00000412827 HRCP23327 699 aa22.55■■□□□ 1.2
PUDP-202ENST00000412827 PTPRKQ15262 1439 aa22.55■■□□□ 1.2
PUDP-202ENST00000412827 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
PUDP-202ENST00000412827 ERBINQ96RT1 1412 aa22.53■■□□□ 1.2
PUDP-202ENST00000412827 AGLP35573 1532 aa22.52■■□□□ 1.2
PUDP-202ENST00000412827 DHX29Q7Z478 1369 aaKnown RBP22.52■■□□□ 1.2
PUDP-202ENST00000412827 EIF2AK4Q9P2K8 1649 aaKnown RBP22.5■■□□□ 1.19
PUDP-202ENST00000412827 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
PUDP-202ENST00000412827 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
PUDP-202ENST00000412827 ARID4BQ4LE39 1312 aaPredicted RBP22.48■■□□□ 1.19
PUDP-202ENST00000412827 HFM1A2PYH4 1435 aa22.48■■□□□ 1.19
PUDP-202ENST00000412827 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
PUDP-202ENST00000412827 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
PUDP-202ENST00000412827 GCC2Q8IWJ2 1684 aa22.47■■□□□ 1.19
PUDP-202ENST00000412827 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
PUDP-202ENST00000412827 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
PUDP-202ENST00000412827 NAIPQ13075 1403 aa22.42■■□□□ 1.18
PUDP-202ENST00000412827 CLSPNQ9HAW4 1339 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms