RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 LOC105371045A0A1W2PR82 267 aa28.11■■■□□ 2.09
HSPG2-204ENST00000412328 ARHGAP5Q13017 1502 aa28.1■■■□□ 2.09
HSPG2-204ENST00000412328 KDM4FA0A1W2PPD8 638 aa28.1■■■□□ 2.09
HSPG2-204ENST00000412328 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
HSPG2-204ENST00000412328 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
HSPG2-204ENST00000412328 ABCC1P33527 1531 aa28.08■■■□□ 2.09
HSPG2-204ENST00000412328 KDM5CP41229 1560 aa28.07■■■□□ 2.08
HSPG2-204ENST00000412328 RAPGEF3O95398 923 aa28.07■■■□□ 2.08
HSPG2-204ENST00000412328 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
HSPG2-204ENST00000412328 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
HSPG2-204ENST00000412328 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
HSPG2-204ENST00000412328 ZFYVE16Q7Z3T8 1539 aa28.02■■■□□ 2.08
HSPG2-204ENST00000412328 BCORL1Q5H9F3 1711 aa28.01■■■□□ 2.07
HSPG2-204ENST00000412328 ADAMTSL3P82987 1691 aa28.01■■■□□ 2.07
HSPG2-204ENST00000412328 SCAPERQ9BY12 1400 aa28.01■■■□□ 2.07
HSPG2-204ENST00000412328 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
HSPG2-204ENST00000412328 GPATCH8Q9UKJ3 1502 aaKnown RBP27.98■■■□□ 2.07
HSPG2-204ENST00000412328 MAGI2Q86UL8 1455 aa27.97■■■□□ 2.07
HSPG2-204ENST00000412328 HECW2Q9P2P5 1572 aa27.97■■■□□ 2.07
HSPG2-204ENST00000412328 SUPT6HQ7KZ85 1726 aaKnown RBP27.96■■■□□ 2.07
HSPG2-204ENST00000412328 ZNF518AQ6AHZ1 1483 aa27.95■■■□□ 2.07
HSPG2-204ENST00000412328 YEATS2Q9ULM3 1422 aa27.95■■■□□ 2.07
HSPG2-204ENST00000412328 ABCA6Q8N139 1617 aa27.93■■■□□ 2.06
HSPG2-204ENST00000412328 EFCAB2Q5VUJ9 269 aa27.92■■■□□ 2.06
HSPG2-204ENST00000412328 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
HSPG2-204ENST00000412328 DIP2CQ9Y2E4 1556 aa27.91■■■□□ 2.06
HSPG2-204ENST00000412328 MAP3K1Q13233 1512 aa27.91■■■□□ 2.06
HSPG2-204ENST00000412328 MTUS2Q5JR59 1369 aa27.9■■■□□ 2.06
HSPG2-204ENST00000412328 SYCP2Q9BX26 1530 aa27.9■■■□□ 2.06
HSPG2-204ENST00000412328 KIDINS220Q9ULH0 1771 aa27.9■■■□□ 2.06
HSPG2-204ENST00000412328 MADDQ8WXG6 1647 aa27.89■■■□□ 2.05
HSPG2-204ENST00000412328 REREQ9P2R6 1566 aa27.86■■■□□ 2.05
HSPG2-204ENST00000412328 TRAPPC8Q9Y2L5 1435 aa27.85■■■□□ 2.05
HSPG2-204ENST00000412328 INO80Q9ULG1 1556 aaPredicted RBP27.84■■■□□ 2.05
HSPG2-204ENST00000412328 NCOA2Q15596 1464 aa27.83■■■□□ 2.05
HSPG2-204ENST00000412328 LRRC9Q6ZRR7 1453 aa27.83■■■□□ 2.05
HSPG2-204ENST00000412328 MLH3Q9UHC1 1453 aa27.83■■■□□ 2.05
HSPG2-204ENST00000412328 RIMS1Q86UR5 1692 aaKnown RBP27.8■■■□□ 2.04
HSPG2-204ENST00000412328 FER1L4A9Z1Z3 1794 aa27.8■■■□□ 2.04
HSPG2-204ENST00000412328 CCNB3Q8WWL7 1395 aa27.79■■■□□ 2.04
HSPG2-204ENST00000412328 C9orf84Q5VXU9 1444 aa27.78■■■□□ 2.04
HSPG2-204ENST00000412328 ATP10AO60312 1499 aa27.77■■■□□ 2.04
HSPG2-204ENST00000412328 KIAA1107Q9UPP5 1409 aa27.76■■■□□ 2.04
HSPG2-204ENST00000412328 PLEKHH2Q8IVE3 1493 aa27.76■■■□□ 2.03
HSPG2-204ENST00000412328 AFAP1Q8N556 730 aa27.74■■■□□ 2.03
HSPG2-204ENST00000412328 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
HSPG2-204ENST00000412328 PTPRMP28827 1452 aa27.71■■■□□ 2.03
HSPG2-204ENST00000412328 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
HSPG2-204ENST00000412328 PLXNC1O60486 1568 aa27.7■■■□□ 2.03
HSPG2-204ENST00000412328 CAMSAP2Q08AD1 1489 aa27.7■■■□□ 2.02
HSPG2-204ENST00000412328 ADGBQ8N7X0 1667 aa27.68■■■□□ 2.02
HSPG2-204ENST00000412328 AGLP35573 1532 aa27.68■■■□□ 2.02
HSPG2-204ENST00000412328 CFDP1Q9UEE9 299 aaPredicted RBP27.66■■■□□ 2.02
HSPG2-204ENST00000412328 ARHGEF5Q12774 1597 aa27.65■■■□□ 2.02
HSPG2-204ENST00000412328 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
HSPG2-204ENST00000412328 ZNF644Q9H582 1327 aaPredicted RBP27.62■■■□□ 2.01
HSPG2-204ENST00000412328 ZNF777Q9ULD5 760 aaPredicted RBP27.61■■■□□ 2.01
HSPG2-204ENST00000412328 HNRNPMP52272 730 aaKnown RBP eCLIP27.58■■■□□ 2.01
HSPG2-204ENST00000412328 ARID4BQ4LE39 1312 aaPredicted RBP27.58■■■□□ 2.01
HSPG2-204ENST00000412328 CCDC141Q6ZP82 1450 aa27.57■■■□□ 2
HSPG2-204ENST00000412328 CROCC2H7BZ55 1655 aa27.57■■■□□ 2
HSPG2-204ENST00000412328 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
HSPG2-204ENST00000412328 MAST1Q9Y2H9 1570 aa27.54■■■□□ 2
HSPG2-204ENST00000412328 C3P01024 1663 aa27.52■■■□□ 2
HSPG2-204ENST00000412328 MIA2Q96PC5 1412 aa27.51■■□□□ 1.99
HSPG2-204ENST00000412328 SPAG9O60271 1321 aaKnown RBP27.51■■□□□ 1.99
HSPG2-204ENST00000412328 MROH2AA6NES4 1674 aa27.51■■□□□ 1.99
HSPG2-204ENST00000412328 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
HSPG2-204ENST00000412328 PTPN23Q9H3S7 1636 aa27.49■■□□□ 1.99
HSPG2-204ENST00000412328 A2MP01023 1474 aa27.49■■□□□ 1.99
HSPG2-204ENST00000412328 LMTK3Q96Q04 1460 aa27.45■■□□□ 1.99
HSPG2-204ENST00000412328 PREX1Q8TCU6 1659 aa27.45■■□□□ 1.98
HSPG2-204ENST00000412328 DNMT1P26358 1616 aaKnown RBP27.43■■□□□ 1.98
HSPG2-204ENST00000412328 TCOF1Q13428 1488 aaKnown RBP27.43■■□□□ 1.98
HSPG2-204ENST00000412328 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
HSPG2-204ENST00000412328 MLECQ14165 292 aa27.41■■□□□ 1.98
HSPG2-204ENST00000412328 MYT1LQ9UL68 1186 aa27.4■■□□□ 1.98
HSPG2-204ENST00000412328 FGD6Q6ZV73 1430 aa27.39■■□□□ 1.97
HSPG2-204ENST00000412328 RNF17Q9BXT8 1623 aaKnown RBP27.36■■□□□ 1.97
HSPG2-204ENST00000412328 EIF2AK4Q9P2K8 1649 aaKnown RBP27.36■■□□□ 1.97
HSPG2-204ENST00000412328 SHANK2Q9UPX8 1470 aa27.36■■□□□ 1.97
HSPG2-204ENST00000412328 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
HSPG2-204ENST00000412328 CNTLNQ9NXG0 1405 aa27.32■■□□□ 1.96
HSPG2-204ENST00000412328 RSPH4AQ5TD94 716 aa27.31■■□□□ 1.96
HSPG2-204ENST00000412328 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
HSPG2-204ENST00000412328 MROH1Q8NDA8 1641 aa27.3■■□□□ 1.96
HSPG2-204ENST00000412328 APLP2Q06481 763 aa27.3■■□□□ 1.96
HSPG2-204ENST00000412328 FAM135AQ9P2D6 1515 aa27.3■■□□□ 1.96
HSPG2-204ENST00000412328 ABCC5O15440 1437 aa27.28■■□□□ 1.96
HSPG2-204ENST00000412328 DAPK1P53355 1430 aa27.26■■□□□ 1.95
HSPG2-204ENST00000412328 ZC3H13Q5T200 1668 aaKnown RBP27.25■■□□□ 1.95
HSPG2-204ENST00000412328 ZNF142P52746 1687 aaPredicted RBP27.24■■□□□ 1.95
HSPG2-204ENST00000412328 MYO3AQ8NEV4 1616 aa27.23■■□□□ 1.95
HSPG2-204ENST00000412328 KDM5DQ9BY66 1539 aa27.23■■□□□ 1.95
HSPG2-204ENST00000412328 DEPDC5O75140 1603 aa27.22■■□□□ 1.95
HSPG2-204ENST00000412328 DUOX2Q9NRD8 1548 aa27.21■■□□□ 1.95
HSPG2-204ENST00000412328 CEBPAP49715 358 aaPredicted RBP27.21■■□□□ 1.95
HSPG2-204ENST00000412328 CEP152O94986 1710 aa27.19■■□□□ 1.94
HSPG2-204ENST00000412328 STRCQ7RTU9 1775 aa27.19■■□□□ 1.94
HSPG2-204ENST00000412328 NPATQ14207 1427 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms