RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
SNRNP35-202ENST00000412157 CDC42BPBQ9Y5S2 1711 aa17.42■□□□□ 0.38
SNRNP35-202ENST00000412157 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
SNRNP35-202ENST00000412157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNRNP35-202ENST00000412157 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
SNRNP35-202ENST00000412157 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
SNRNP35-202ENST00000412157 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.37
SNRNP35-202ENST00000412157 KDM4FA0A1W2PPD8 638 aa17.39■□□□□ 0.37
SNRNP35-202ENST00000412157 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
SNRNP35-202ENST00000412157 HRCP23327 699 aa17.37■□□□□ 0.37
SNRNP35-202ENST00000412157 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
SNRNP35-202ENST00000412157 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
SNRNP35-202ENST00000412157 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
SNRNP35-202ENST00000412157 ASXL2Q76L83 1435 aa17.34■□□□□ 0.37
SNRNP35-202ENST00000412157 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
SNRNP35-202ENST00000412157 ABCA9Q8IUA7 1624 aa17.33■□□□□ 0.37
SNRNP35-202ENST00000412157 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
SNRNP35-202ENST00000412157 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
SNRNP35-202ENST00000412157 DAPK1P53355 1430 aa17.32■□□□□ 0.36
SNRNP35-202ENST00000412157 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
SNRNP35-202ENST00000412157 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
SNRNP35-202ENST00000412157 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
SNRNP35-202ENST00000412157 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
SNRNP35-202ENST00000412157 ARHGEF5Q12774 1597 aa17.3■□□□□ 0.36
SNRNP35-202ENST00000412157 ARAP3Q8WWN8 1544 aa17.3■□□□□ 0.36
SNRNP35-202ENST00000412157 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
SNRNP35-202ENST00000412157 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
SNRNP35-202ENST00000412157 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
SNRNP35-202ENST00000412157 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
SNRNP35-202ENST00000412157 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
SNRNP35-202ENST00000412157 PPRC1Q5VV67 1664 aaKnown RBP17.28■□□□□ 0.36
SNRNP35-202ENST00000412157 ABCC5O15440 1437 aa17.27■□□□□ 0.35
SNRNP35-202ENST00000412157 PLCH2O75038 1416 aa17.27■□□□□ 0.35
SNRNP35-202ENST00000412157 GLI2P10070 1586 aa17.26■□□□□ 0.35
SNRNP35-202ENST00000412157 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
SNRNP35-202ENST00000412157 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
SNRNP35-202ENST00000412157 SYCP2Q9BX26 1530 aa17.24■□□□□ 0.35
SNRNP35-202ENST00000412157 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
SNRNP35-202ENST00000412157 CFAP74Q9C0B2 1584 aa17.23■□□□□ 0.35
SNRNP35-202ENST00000412157 NAIPQ13075 1403 aa17.23■□□□□ 0.35
SNRNP35-202ENST00000412157 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
SNRNP35-202ENST00000412157 ABCC1P33527 1531 aa17.22■□□□□ 0.35
SNRNP35-202ENST00000412157 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
SNRNP35-202ENST00000412157 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
SNRNP35-202ENST00000412157 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
SNRNP35-202ENST00000412157 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
SNRNP35-202ENST00000412157 EFCAB2Q5VUJ9 269 aa17.2■□□□□ 0.34
SNRNP35-202ENST00000412157 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
SNRNP35-202ENST00000412157 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
SNRNP35-202ENST00000412157 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
SNRNP35-202ENST00000412157 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
SNRNP35-202ENST00000412157 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
SNRNP35-202ENST00000412157 MAP3K4Q9Y6R4 1608 aa17.18■□□□□ 0.34
SNRNP35-202ENST00000412157 RSPH4AQ5TD94 716 aa17.18■□□□□ 0.34
SNRNP35-202ENST00000412157 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
SNRNP35-202ENST00000412157 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
SNRNP35-202ENST00000412157 FANCAO15360 1455 aa17.17■□□□□ 0.34
SNRNP35-202ENST00000412157 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
SNRNP35-202ENST00000412157 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
SNRNP35-202ENST00000412157 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNRNP35-202ENST00000412157 COL17A1Q9UMD9 1497 aaPredicted RBP17.15■□□□□ 0.34
SNRNP35-202ENST00000412157 CLSPNQ9HAW4 1339 aa17.15■□□□□ 0.34
SNRNP35-202ENST00000412157 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.33
SNRNP35-202ENST00000412157 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
SNRNP35-202ENST00000412157 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
SNRNP35-202ENST00000412157 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
SNRNP35-202ENST00000412157 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
SNRNP35-202ENST00000412157 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
SNRNP35-202ENST00000412157 NEO1Q92859 1461 aa17.06■□□□□ 0.32
SNRNP35-202ENST00000412157 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
SNRNP35-202ENST00000412157 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
SNRNP35-202ENST00000412157 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-202ENST00000412157 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
SNRNP35-202ENST00000412157 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
SNRNP35-202ENST00000412157 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
SNRNP35-202ENST00000412157 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
SNRNP35-202ENST00000412157 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
SNRNP35-202ENST00000412157 DUOX2Q9NRD8 1548 aa17.03■□□□□ 0.32
SNRNP35-202ENST00000412157 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
SNRNP35-202ENST00000412157 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
SNRNP35-202ENST00000412157 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
SNRNP35-202ENST00000412157 UNC13BO14795 1591 aa16.99■□□□□ 0.31
SNRNP35-202ENST00000412157 KDM5CP41229 1560 aa16.98■□□□□ 0.31
SNRNP35-202ENST00000412157 POGZQ7Z3K3 1410 aa16.98■□□□□ 0.31
SNRNP35-202ENST00000412157 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
SNRNP35-202ENST00000412157 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
SNRNP35-202ENST00000412157 RICTORQ6R327 1708 aa16.98■□□□□ 0.31
SNRNP35-202ENST00000412157 ERBINQ96RT1 1412 aa16.97■□□□□ 0.31
SNRNP35-202ENST00000412157 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
SNRNP35-202ENST00000412157 AFAP1Q8N556 730 aa16.95■□□□□ 0.3
SNRNP35-202ENST00000412157 MYT1LQ9UL68 1186 aa16.95■□□□□ 0.3
SNRNP35-202ENST00000412157 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
SNRNP35-202ENST00000412157 PZPP20742 1482 aa16.93■□□□□ 0.3
SNRNP35-202ENST00000412157 MPHOSPH9Q99550 1183 aa16.92■□□□□ 0.3
SNRNP35-202ENST00000412157 IQGAP3Q86VI3 1631 aa16.92■□□□□ 0.3
SNRNP35-202ENST00000412157 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
SNRNP35-202ENST00000412157 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
SNRNP35-202ENST00000412157 NUP155O75694 1391 aa16.89■□□□□ 0.3
SNRNP35-202ENST00000412157 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
SNRNP35-202ENST00000412157 ABCA6Q8N139 1617 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms