RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PTPN5P54829 565 aa3.11□□□□□ -1.91
RNU4-88P-201ENST00000411220 GOLGA2P5Q9HBQ8 144 aa3.11□□□□□ -1.91
RNU4-88P-201ENST00000411220 PBX2P40425 430 aa3.09□□□□□ -1.91
RNU4-88P-201ENST00000411220 Q8N3U1 123 aa3.09□□□□□ -1.91
RNU4-88P-201ENST00000411220 TSPYL2Q9H2G4 693 aaPredicted RBP3.08□□□□□ -1.92
RNU4-88P-201ENST00000411220 KCNMA1Q12791 1236 aa3.07□□□□□ -1.92
RNU4-88P-201ENST00000411220 ADGRD1Q6QNK2 874 aa3.07□□□□□ -1.92
RNU4-88P-201ENST00000411220 ZSCAN1Q8NBB4 408 aa3.06□□□□□ -1.92
RNU4-88P-201ENST00000411220 COBLO75128 1261 aa3.05□□□□□ -1.92
RNU4-88P-201ENST00000411220 TMEM151AQ8N4L1 468 aa3.05□□□□□ -1.92
RNU4-88P-201ENST00000411220 L3MBTL3Q96JM7 780 aaPredicted RBP3.05□□□□□ -1.92
RNU4-88P-201ENST00000411220 ZSWIM6Q9HCJ5 1215 aa3.03□□□□□ -1.92
RNU4-88P-201ENST00000411220 ADAM23O75077 832 aa3.02□□□□□ -1.93
RNU4-88P-201ENST00000411220 GSK3AP49840 483 aa3.02□□□□□ -1.93
RNU4-88P-201ENST00000411220 PDZRN3Q9UPQ7 1066 aa3.02□□□□□ -1.93
RNU4-88P-201ENST00000411220 IGHA1P01876 353 aa3.01□□□□□ -1.93
RNU4-88P-201ENST00000411220 MNX1P50219 401 aaPredicted RBP3.01□□□□□ -1.93
RNU4-88P-201ENST00000411220 LCE2CQ5TA81 110 aa3.01□□□□□ -1.93
RNU4-88P-201ENST00000411220 POTEEQ6S8J3 1075 aa3.01□□□□□ -1.93
RNU4-88P-201ENST00000411220 GDF11O95390 407 aa3□□□□□ -1.93
RNU4-88P-201ENST00000411220 TMEM106CQ9BVX2 250 aa3□□□□□ -1.93
RNU4-88P-201ENST00000411220 ITGBL1O95965 494 aaPredicted RBP2.99□□□□□ -1.93
RNU4-88P-201ENST00000411220 MYT1Q01538 1121 aa2.99□□□□□ -1.93
RNU4-88P-201ENST00000411220 AXIN2Q9Y2T1 843 aa2.99□□□□□ -1.93
RNU4-88P-201ENST00000411220 HRO43593 1189 aa2.98□□□□□ -1.93
RNU4-88P-201ENST00000411220 GPAT2Q6NUI2 795 aa2.98□□□□□ -1.93
RNU4-88P-201ENST00000411220 ZNF316A6NFI3 1004 aaPredicted RBP2.97□□□□□ -1.93
RNU4-88P-201ENST00000411220 GPR153Q6NV75 609 aa2.97□□□□□ -1.93
RNU4-88P-201ENST00000411220 STAC3Q96MF2 364 aa2.97□□□□□ -1.93
RNU4-88P-201ENST00000411220 PRKD2Q9BZL6 878 aa2.96□□□□□ -1.94
RNU4-88P-201ENST00000411220 TK2O00142 265 aa2.95□□□□□ -1.94
RNU4-88P-201ENST00000411220 RASSF7Q02833 373 aa2.94□□□□□ -1.94
RNU4-88P-201ENST00000411220 PDCD7Q8N8D1 485 aaKnown RBP2.94□□□□□ -1.94
RNU4-88P-201ENST00000411220 PKDCCQ504Y2 493 aa2.93□□□□□ -1.94
RNU4-88P-201ENST00000411220 SGIP1Q9BQI5 828 aa2.93□□□□□ -1.94
RNU4-88P-201ENST00000411220 MKRN4PQ13434 485 aaPredicted RBP2.91□□□□□ -1.94
RNU4-88P-201ENST00000411220 THSD4Q6ZMP0 1018 aa2.91□□□□□ -1.94
RNU4-88P-201ENST00000411220 V9GY48 417 aaPredicted RBP2.91□□□□□ -1.94
RNU4-88P-201ENST00000411220 DGAT1O75907 488 aa2.9□□□□□ -1.95
RNU4-88P-201ENST00000411220 TERTO14746 1132 aaKnown RBP2.89□□□□□ -1.95
RNU4-88P-201ENST00000411220 STAG3Q9UJ98 1225 aa2.89□□□□□ -1.95
RNU4-88P-201ENST00000411220 PCDHB13Q9Y5F0 798 aa2.89□□□□□ -1.95
RNU4-88P-201ENST00000411220 FOXK2Q01167 660 aa2.86□□□□□ -1.95
RNU4-88P-201ENST00000411220 DNMT3AQ9Y6K1 912 aaPredicted RBP2.86□□□□□ -1.95
RNU4-88P-201ENST00000411220 C11orf95C9JLR9 678 aaPredicted RBP2.85□□□□□ -1.95
RNU4-88P-201ENST00000411220 ARHGAP33O14559 1287 aa2.85□□□□□ -1.95
RNU4-88P-201ENST00000411220 KRTAP1-1Q07627 177 aa2.85□□□□□ -1.95
RNU4-88P-201ENST00000411220 RNF225M0QZC1 329 aaPredicted RBP2.84□□□□□ -1.95
RNU4-88P-201ENST00000411220 KCNC4Q03721 635 aa2.84□□□□□ -1.95
RNU4-88P-201ENST00000411220 ARSIQ5FYB1 569 aa2.84□□□□□ -1.95
RNU4-88P-201ENST00000411220 EHMT2Q96KQ7 1210 aa2.83□□□□□ -1.96
RNU4-88P-201ENST00000411220 GMPRP36959 345 aa2.82□□□□□ -1.96
RNU4-88P-201ENST00000411220 ST8SIA5O15466 376 aa2.81□□□□□ -1.96
RNU4-88P-201ENST00000411220 YBX3P16989 372 aaKnown RBP eCLIP2.81□□□□□ -1.96
RNU4-88P-201ENST00000411220 DMRTA1Q5VZB9 504 aa2.81□□□□□ -1.96
RNU4-88P-201ENST00000411220 IFNL1Q8IU54 200 aa2.81□□□□□ -1.96
RNU4-88P-201ENST00000411220 AAASQ9NRG9 546 aa2.8□□□□□ -1.96
RNU4-88P-201ENST00000411220 G3V3G9 751 aa2.78□□□□□ -1.96
RNU4-88P-201ENST00000411220 DCAF8Q5TAQ9 597 aa2.78□□□□□ -1.96
RNU4-88P-201ENST00000411220 K7ELQ4 463 aaPredicted RBP2.77□□□□□ -1.97
RNU4-88P-201ENST00000411220 FZD5Q13467 585 aa2.77□□□□□ -1.97
RNU4-88P-201ENST00000411220 SLC16A10Q8TF71 515 aa2.77□□□□□ -1.97
RNU4-88P-201ENST00000411220 GMPR2Q9P2T1 348 aaKnown RBP2.77□□□□□ -1.97
RNU4-88P-201ENST00000411220 KHSRPQ92945 711 aaKnown RBP eCLIP2.76□□□□□ -1.97
RNU4-88P-201ENST00000411220 WNT2BQ93097 391 aa2.75□□□□□ -1.97
RNU4-88P-201ENST00000411220 DPY19L2Q6NUT2 758 aa2.74□□□□□ -1.97
RNU4-88P-201ENST00000411220 FAM187AA6NFU0 413 aa2.73□□□□□ -1.97
RNU4-88P-201ENST00000411220 GOLGA8CPA6NN73 597 aa2.73□□□□□ -1.97
RNU4-88P-201ENST00000411220 MSTNO14793 375 aa2.73□□□□□ -1.97
RNU4-88P-201ENST00000411220 SLURP2P0DP57 97 aa2.72□□□□□ -1.97
RNU4-88P-201ENST00000411220 TRIM67Q6ZTA4 783 aa2.72□□□□□ -1.97
RNU4-88P-201ENST00000411220 CCER1Q8TC90 406 aaPredicted RBP2.72□□□□□ -1.97
RNU4-88P-201ENST00000411220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU4-88P-201ENST00000411220 BOLA1Q9Y3E2 137 aa2.72□□□□□ -1.97
RNU4-88P-201ENST00000411220 RGS19P49795 217 aa2.71□□□□□ -1.98
RNU4-88P-201ENST00000411220 IRF7Q92985 503 aa2.71□□□□□ -1.98
RNU4-88P-201ENST00000411220 PSEN2P49810 448 aa2.7□□□□□ -1.98
RNU4-88P-201ENST00000411220 DACH1Q9UI36 760 aa2.7□□□□□ -1.98
RNU4-88P-201ENST00000411220 MKRN3Q13064 507 aaKnown RBP2.69□□□□□ -1.98
RNU4-88P-201ENST00000411220 LHX6Q9UPM6 363 aa2.69□□□□□ -1.98
RNU4-88P-201ENST00000411220 LCE5AQ5TCM9 118 aa2.68□□□□□ -1.98
RNU4-88P-201ENST00000411220 WBP1LQ9NX94 342 aa2.68□□□□□ -1.98
RNU4-88P-201ENST00000411220 LSRQ86X29 649 aaPredicted RBP2.67□□□□□ -1.98
RNU4-88P-201ENST00000411220 CRIPAKQ8N1N5 446 aa2.67□□□□□ -1.98
RNU4-88P-201ENST00000411220 NYAP1Q6ZVC0 841 aa2.66□□□□□ -1.98
RNU4-88P-201ENST00000411220 SPOCK3Q9BQ16 436 aa2.66□□□□□ -1.98
RNU4-88P-201ENST00000411220 PRR20EP86478 221 aa2.65□□□□□ -1.99
RNU4-88P-201ENST00000411220 PRR20CP86479 221 aa2.65□□□□□ -1.99
RNU4-88P-201ENST00000411220 PRR20DP86480 221 aa2.65□□□□□ -1.99
RNU4-88P-201ENST00000411220 PRR20BP86481 221 aa2.65□□□□□ -1.99
RNU4-88P-201ENST00000411220 PRR20AP86496 221 aa2.65□□□□□ -1.99
RNU4-88P-201ENST00000411220 GOLGA2Q08379 1002 aa2.65□□□□□ -1.99
RNU4-88P-201ENST00000411220 NUDT7P0C024 238 aa2.64□□□□□ -1.99
RNU4-88P-201ENST00000411220 VPS9D1Q9Y2B5 631 aa2.64□□□□□ -1.99
RNU4-88P-201ENST00000411220 IRS1P35568 1242 aa2.63□□□□□ -1.99
RNU4-88P-201ENST00000411220 PPP1R18Q6NYC8 613 aa2.63□□□□□ -1.99
RNU4-88P-201ENST00000411220 RASEFQ8IZ41 740 aa2.63□□□□□ -1.99
RNU4-88P-201ENST00000411220 GALNT6Q8NCL4 622 aa2.63□□□□□ -1.99
RNU4-88P-201ENST00000411220 PSDA5PKW4 1024 aaPredicted RBP2.62□□□□□ -1.99
RNU4-88P-201ENST00000411220 SNRPBP14678 240 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms