RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 HOXB1P14653 301 aaPredicted RBP5.6□□□□□ -1.51
RNU2-55P-201ENST00000411146 KHSRPQ92945 711 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU2-55P-201ENST00000411146 G3V3G9 751 aa5.59□□□□□ -1.51
RNU2-55P-201ENST00000411146 PPP1R37O75864 691 aa5.58□□□□□ -1.52
RNU2-55P-201ENST00000411146 STK25O00506 426 aa5.57□□□□□ -1.52
RNU2-55P-201ENST00000411146 DOK7Q18PE1 504 aa5.56□□□□□ -1.52
RNU2-55P-201ENST00000411146 GPR153Q6NV75 609 aa5.56□□□□□ -1.52
RNU2-55P-201ENST00000411146 NLRP6P59044 892 aa5.55□□□□□ -1.52
RNU2-55P-201ENST00000411146 ARSIQ5FYB1 569 aa5.55□□□□□ -1.52
RNU2-55P-201ENST00000411146 ZNF710Q8N1W2 664 aa5.55□□□□□ -1.52
RNU2-55P-201ENST00000411146 ERBB3P21860 1342 aa5.53□□□□□ -1.52
RNU2-55P-201ENST00000411146 C2orf72A6NCS6 295 aa5.53□□□□□ -1.52
RNU2-55P-201ENST00000411146 VARS2Q5ST30 1063 aaKnown RBP5.53□□□□□ -1.52
RNU2-55P-201ENST00000411146 ZSWIM6Q9HCJ5 1215 aa5.53□□□□□ -1.52
RNU2-55P-201ENST00000411146 KIF3CO14782 793 aa5.52□□□□□ -1.53
RNU2-55P-201ENST00000411146 RIMBP2O15034 1052 aa5.5□□□□□ -1.53
RNU2-55P-201ENST00000411146 ZNF687Q8N1G0 1237 aa5.5□□□□□ -1.53
RNU2-55P-201ENST00000411146 POTEEQ6S8J3 1075 aa5.48□□□□□ -1.53
RNU2-55P-201ENST00000411146 NKX1-1Q15270 411 aaPredicted RBP5.47□□□□□ -1.53
RNU2-55P-201ENST00000411146 NUDT7P0C024 238 aa5.46□□□□□ -1.54
RNU2-55P-201ENST00000411146 ZNF316A6NFI3 1004 aaPredicted RBP5.45□□□□□ -1.54
RNU2-55P-201ENST00000411146 AXIN2Q9Y2T1 843 aa5.45□□□□□ -1.54
RNU2-55P-201ENST00000411146 CHGAP10645 457 aaKnown RBP5.44□□□□□ -1.54
RNU2-55P-201ENST00000411146 RNF166Q96A37 237 aaPredicted RBP5.44□□□□□ -1.54
RNU2-55P-201ENST00000411146 TAOK2Q9UL54 1235 aa5.44□□□□□ -1.54
RNU2-55P-201ENST00000411146 LHX6Q9UPM6 363 aa5.44□□□□□ -1.54
RNU2-55P-201ENST00000411146 PCDHGA4Q9Y5G9 962 aa5.44□□□□□ -1.54
RNU2-55P-201ENST00000411146 ANKRD13DQ6ZTN6 518 aa5.43□□□□□ -1.54
RNU2-55P-201ENST00000411146 MYT1LQ9UL68 1186 aa5.43□□□□□ -1.54
RNU2-55P-201ENST00000411146 KDM4FA0A1W2PPD8 638 aa5.42□□□□□ -1.54
RNU2-55P-201ENST00000411146 HS6ST3Q8IZP7 471 aa5.42□□□□□ -1.54
RNU2-55P-201ENST00000411146 TMC2Q8TDI7 906 aa5.41□□□□□ -1.54
RNU2-55P-201ENST00000411146 SLC34A2O95436 690 aa5.4□□□□□ -1.54
RNU2-55P-201ENST00000411146 DSG2Q14126 1118 aa5.4□□□□□ -1.54
RNU2-55P-201ENST00000411146 PLPP6Q8IY26 295 aa5.39□□□□□ -1.55
RNU2-55P-201ENST00000411146 PTGER2P43116 358 aa5.38□□□□□ -1.55
RNU2-55P-201ENST00000411146 LSM11P83369 360 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU2-55P-201ENST00000411146 FOXK1P85037 733 aa5.37□□□□□ -1.55
RNU2-55P-201ENST00000411146 GPHNQ9NQX3 736 aaPredicted RBP5.37□□□□□ -1.55
RNU2-55P-201ENST00000411146 PSEN2P49810 448 aa5.36□□□□□ -1.55
RNU2-55P-201ENST00000411146 DMRTA1Q5VZB9 504 aa5.36□□□□□ -1.55
RNU2-55P-201ENST00000411146 PTCD2Q8WV60 388 aaKnown RBP5.36□□□□□ -1.55
RNU2-55P-201ENST00000411146 GTPBP6O43824 516 aaPredicted RBP5.35□□□□□ -1.55
RNU2-55P-201ENST00000411146 NCKAP5LQ9HCH0 1330 aa5.34□□□□□ -1.55
RNU2-55P-201ENST00000411146 PBX2P40425 430 aa5.34□□□□□ -1.55
RNU2-55P-201ENST00000411146 UPF1Q92900 1129 aaKnown RBP eCLIP5.34□□□□□ -1.55
RNU2-55P-201ENST00000411146 DNAJC5Q9H3Z4 198 aa5.33□□□□□ -1.56
RNU2-55P-201ENST00000411146 CADPS2Q86UW7 1296 aa5.32□□□□□ -1.56
RNU2-55P-201ENST00000411146 CRISPLD2Q9H0B8 497 aa5.32□□□□□ -1.56
RNU2-55P-201ENST00000411146 OXER1Q8TDS5 423 aa5.31□□□□□ -1.56
RNU2-55P-201ENST00000411146 ARHGAP33O14559 1287 aa5.3□□□□□ -1.56
RNU2-55P-201ENST00000411146 ADGRD1Q6QNK2 874 aa5.3□□□□□ -1.56
RNU2-55P-201ENST00000411146 HRO43593 1189 aa5.29□□□□□ -1.56
RNU2-55P-201ENST00000411146 PSDA5PKW4 1024 aaPredicted RBP5.28□□□□□ -1.56
RNU2-55P-201ENST00000411146 PPP1R15BQ5SWA1 713 aa5.28□□□□□ -1.56
RNU2-55P-201ENST00000411146 LARP6Q9BRS8 491 aaKnown RBP5.28□□□□□ -1.56
RNU2-55P-201ENST00000411146 DCAF8L2P0C7V8 631 aa5.27□□□□□ -1.57
RNU2-55P-201ENST00000411146 KCNK17Q96T54 332 aa5.27□□□□□ -1.57
RNU2-55P-201ENST00000411146 EMILIN3Q9NT22 766 aa5.27□□□□□ -1.57
RNU2-55P-201ENST00000411146 TK2O00142 265 aa5.26□□□□□ -1.57
RNU2-55P-201ENST00000411146 ZNF454Q8N9F8 522 aa5.25□□□□□ -1.57
RNU2-55P-201ENST00000411146 HCSTQ9UBK5 93 aa5.25□□□□□ -1.57
RNU2-55P-201ENST00000411146 PDE4AP27815 886 aa5.24□□□□□ -1.57
RNU2-55P-201ENST00000411146 PPP4R3BQ5MIZ7 849 aa5.24□□□□□ -1.57
RNU2-55P-201ENST00000411146 ANO8Q9HCE9 1232 aaPredicted RBP5.24□□□□□ -1.57
RNU2-55P-201ENST00000411146 PLA2G2EQ9NZK7 142 aa5.24□□□□□ -1.57
RNU2-55P-201ENST00000411146 VPS9D1Q9Y2B5 631 aa5.24□□□□□ -1.57
RNU2-55P-201ENST00000411146 TBC1D12O60347 775 aa5.23□□□□□ -1.57
RNU2-55P-201ENST00000411146 EVI5O60447 810 aa5.23□□□□□ -1.57
RNU2-55P-201ENST00000411146 FOSBP53539 338 aa5.23□□□□□ -1.57
RNU2-55P-201ENST00000411146 KCTD12Q96CX2 325 aaKnown RBP5.23□□□□□ -1.57
RNU2-55P-201ENST00000411146 ADAM33Q9BZ11 813 aa5.23□□□□□ -1.57
RNU2-55P-201ENST00000411146 MFSD10Q14728 455 aa5.22□□□□□ -1.57
RNU2-55P-201ENST00000411146 DDX27Q96GQ7 796 aaKnown RBP5.21□□□□□ -1.58
RNU2-55P-201ENST00000411146 BHMG1C9JSJ3 638 aaPredicted RBP5.2□□□□□ -1.58
RNU2-55P-201ENST00000411146 BCL2L12Q9HB09 334 aa5.2□□□□□ -1.58
RNU2-55P-201ENST00000411146 COL9A1P20849 921 aa5.19□□□□□ -1.58
RNU2-55P-201ENST00000411146 PTPN5P54829 565 aa5.19□□□□□ -1.58
RNU2-55P-201ENST00000411146 MAP3K9P80192 1104 aa5.19□□□□□ -1.58
RNU2-55P-201ENST00000411146 ZBED2Q9BTP6 218 aa5.19□□□□□ -1.58
RNU2-55P-201ENST00000411146 PCDHGA10Q9Y5H3 936 aa5.19□□□□□ -1.58
RNU2-55P-201ENST00000411146 PROX2Q3B8N5 592 aa5.18□□□□□ -1.58
RNU2-55P-201ENST00000411146 SLC4A5Q9BY07 1137 aa5.18□□□□□ -1.58
RNU2-55P-201ENST00000411146 ZDHHC16Q969W1 377 aa5.17□□□□□ -1.58
RNU2-55P-201ENST00000411146 RYDENQ9NUL5 291 aaKnown RBP5.17□□□□□ -1.58
RNU2-55P-201ENST00000411146 DPYSL4O14531 572 aa5.16□□□□□ -1.58
RNU2-55P-201ENST00000411146 PTPREP23469 700 aa5.16□□□□□ -1.58
RNU2-55P-201ENST00000411146 JPH4Q96JJ6 628 aa5.16□□□□□ -1.58
RNU2-55P-201ENST00000411146 PRIM1P49642 420 aaKnown RBP5.14□□□□□ -1.59
RNU2-55P-201ENST00000411146 CAMK2BQ13554 666 aa5.14□□□□□ -1.59
RNU2-55P-201ENST00000411146 KCNH8Q96L42 1107 aa5.14□□□□□ -1.59
RNU2-55P-201ENST00000411146 THSD4Q6ZMP0 1018 aa5.13□□□□□ -1.59
RNU2-55P-201ENST00000411146 DDX12PQ92771 950 aa5.13□□□□□ -1.59
RNU2-55P-201ENST00000411146 RBM33Q96EV2 1170 aaKnown RBP5.13□□□□□ -1.59
RNU2-55P-201ENST00000411146 STAC3Q96MF2 364 aa5.13□□□□□ -1.59
RNU2-55P-201ENST00000411146 RTN4Q9NQC3 1192 aaKnown RBP5.13□□□□□ -1.59
RNU2-55P-201ENST00000411146 IFFO2Q5TF58 517 aa5.12□□□□□ -1.59
RNU2-55P-201ENST00000411146 BBXQ8WY36 941 aaPredicted RBP5.12□□□□□ -1.59
RNU2-55P-201ENST00000411146 WNT2BQ93097 391 aa5.12□□□□□ -1.59
RNU2-55P-201ENST00000411146 C3orf80F5H4A9 247 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms