RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 C2orf72A6NCS6 295 aa9.67□□□□□ -0.86
RNU4-55P-201ENST00000410731 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
RNU4-55P-201ENST00000410731 ST18O60284 1047 aa9.65□□□□□ -0.86
RNU4-55P-201ENST00000410731 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
RNU4-55P-201ENST00000410731 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
RNU4-55P-201ENST00000410731 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
RNU4-55P-201ENST00000410731 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
RNU4-55P-201ENST00000410731 CRISPLD2Q9H0B8 497 aa9.6□□□□□ -0.87
RNU4-55P-201ENST00000410731 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
RNU4-55P-201ENST00000410731 PAXIP1Q6ZW49 1069 aaPredicted RBP9.59□□□□□ -0.87
RNU4-55P-201ENST00000410731 POTEMA6NI47 508 aa9.58□□□□□ -0.88
RNU4-55P-201ENST00000410731 FOXK1P85037 733 aa9.58□□□□□ -0.88
RNU4-55P-201ENST00000410731 POTEGQ6S5H5 508 aa9.58□□□□□ -0.88
RNU4-55P-201ENST00000410731 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
RNU4-55P-201ENST00000410731 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
RNU4-55P-201ENST00000410731 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
RNU4-55P-201ENST00000410731 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
RNU4-55P-201ENST00000410731 PDE4AP27815 886 aa9.55□□□□□ -0.88
RNU4-55P-201ENST00000410731 DSG2Q14126 1118 aa9.55□□□□□ -0.88
RNU4-55P-201ENST00000410731 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
RNU4-55P-201ENST00000410731 SLC34A2O95436 690 aa9.54□□□□□ -0.88
RNU4-55P-201ENST00000410731 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
RNU4-55P-201ENST00000410731 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
RNU4-55P-201ENST00000410731 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
RNU4-55P-201ENST00000410731 MARVELD3Q96A59 401 aa9.52□□□□□ -0.89
RNU4-55P-201ENST00000410731 EMP3P54852 163 aa9.51□□□□□ -0.89
RNU4-55P-201ENST00000410731 MFSD10Q14728 455 aa9.51□□□□□ -0.89
RNU4-55P-201ENST00000410731 GPR153Q6NV75 609 aa9.51□□□□□ -0.89
RNU4-55P-201ENST00000410731 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
RNU4-55P-201ENST00000410731 DDX27Q96GQ7 796 aaKnown RBP9.49□□□□□ -0.89
RNU4-55P-201ENST00000410731 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
RNU4-55P-201ENST00000410731 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
RNU4-55P-201ENST00000410731 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
RNU4-55P-201ENST00000410731 KHSRPQ92945 711 aaKnown RBP eCLIP9.44□□□□□ -0.9
RNU4-55P-201ENST00000410731 PCDH10Q9P2E7 1040 aa9.44□□□□□ -0.9
RNU4-55P-201ENST00000410731 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
RNU4-55P-201ENST00000410731 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
RNU4-55P-201ENST00000410731 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
RNU4-55P-201ENST00000410731 HS3ST6Q96QI5 342 aa9.42□□□□□ -0.9
RNU4-55P-201ENST00000410731 ERBB3P21860 1342 aa9.41□□□□□ -0.9
RNU4-55P-201ENST00000410731 TBC1D12O60347 775 aa9.41□□□□□ -0.9
RNU4-55P-201ENST00000410731 NUDT7P0C024 238 aa9.41□□□□□ -0.9
RNU4-55P-201ENST00000410731 KDM4FA0A1W2PPD8 638 aa9.39□□□□□ -0.91
RNU4-55P-201ENST00000410731 POTEB3A0JP26 581 aa9.39□□□□□ -0.91
RNU4-55P-201ENST00000410731 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
RNU4-55P-201ENST00000410731 POTEBQ6S5H4 581 aa9.39□□□□□ -0.91
RNU4-55P-201ENST00000410731 CDAN1Q8IWY9 1227 aa9.39□□□□□ -0.91
RNU4-55P-201ENST00000410731 UPF1Q92900 1129 aaKnown RBP eCLIP9.39□□□□□ -0.91
RNU4-55P-201ENST00000410731 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
RNU4-55P-201ENST00000410731 VARS2Q5ST30 1063 aaKnown RBP9.38□□□□□ -0.91
RNU4-55P-201ENST00000410731 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
RNU4-55P-201ENST00000410731 EMILIN3Q9NT22 766 aa9.37□□□□□ -0.91
RNU4-55P-201ENST00000410731 LHX6Q9UPM6 363 aa9.35□□□□□ -0.91
RNU4-55P-201ENST00000410731 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
RNU4-55P-201ENST00000410731 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
RNU4-55P-201ENST00000410731 ZNF687Q8N1G0 1237 aa9.32□□□□□ -0.92
RNU4-55P-201ENST00000410731 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
RNU4-55P-201ENST00000410731 EVI5O60447 810 aa9.3□□□□□ -0.92
RNU4-55P-201ENST00000410731 E2F4Q16254 413 aa9.3□□□□□ -0.92
RNU4-55P-201ENST00000410731 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
RNU4-55P-201ENST00000410731 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
RNU4-55P-201ENST00000410731 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
RNU4-55P-201ENST00000410731 PLSCR2Q9NRY7 297 aa9.29□□□□□ -0.92
RNU4-55P-201ENST00000410731 DPYSL4O14531 572 aa9.27□□□□□ -0.93
RNU4-55P-201ENST00000410731 PPP4R3BQ5MIZ7 849 aa9.26□□□□□ -0.93
RNU4-55P-201ENST00000410731 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
RNU4-55P-201ENST00000410731 PBX2P40425 430 aa9.25□□□□□ -0.93
RNU4-55P-201ENST00000410731 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
RNU4-55P-201ENST00000410731 FOSBP53539 338 aa9.24□□□□□ -0.93
RNU4-55P-201ENST00000410731 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
RNU4-55P-201ENST00000410731 PDIA6Q15084 440 aa9.23□□□□□ -0.93
RNU4-55P-201ENST00000410731 ZNF454Q8N9F8 522 aa9.23□□□□□ -0.93
RNU4-55P-201ENST00000410731 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
RNU4-55P-201ENST00000410731 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.94
RNU4-55P-201ENST00000410731 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
RNU4-55P-201ENST00000410731 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
RNU4-55P-201ENST00000410731 PTGER2P43116 358 aa9.18□□□□□ -0.94
RNU4-55P-201ENST00000410731 LSM11P83369 360 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU4-55P-201ENST00000410731 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
RNU4-55P-201ENST00000410731 BCL2L12Q9HB09 334 aa9.18□□□□□ -0.94
RNU4-55P-201ENST00000410731 PHF14O94880 888 aa9.17□□□□□ -0.94
RNU4-55P-201ENST00000410731 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
RNU4-55P-201ENST00000410731 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
RNU4-55P-201ENST00000410731 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
RNU4-55P-201ENST00000410731 PCDHGA10Q9Y5H3 936 aa9.17□□□□□ -0.94
RNU4-55P-201ENST00000410731 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
RNU4-55P-201ENST00000410731 SPNS2Q8IVW8 549 aa9.16□□□□□ -0.94
RNU4-55P-201ENST00000410731 FBXW7Q969H0 707 aa9.15□□□□□ -0.94
RNU4-55P-201ENST00000410731 KCNH8Q96L42 1107 aa9.15□□□□□ -0.94
RNU4-55P-201ENST00000410731 EPAS1Q99814 870 aa9.15□□□□□ -0.94
RNU4-55P-201ENST00000410731 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
RNU4-55P-201ENST00000410731 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
RNU4-55P-201ENST00000410731 PTPREP23469 700 aa9.13□□□□□ -0.95
RNU4-55P-201ENST00000410731 PSEN2P49810 448 aa9.13□□□□□ -0.95
RNU4-55P-201ENST00000410731 DDX12PQ92771 950 aa9.13□□□□□ -0.95
RNU4-55P-201ENST00000410731 ANKRD13DQ6ZTN6 518 aa9.12□□□□□ -0.95
RNU4-55P-201ENST00000410731 VSIG10Q8N0Z9 540 aa9.12□□□□□ -0.95
RNU4-55P-201ENST00000410731 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
RNU4-55P-201ENST00000410731 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
RNU4-55P-201ENST00000410731 TK2O00142 265 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms