RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 MIA2Q96PC5 1412 aa23.49■■□□□ 1.35
LSM5-207ENST00000410044 EFCAB2Q5VUJ9 269 aa23.48■■□□□ 1.35
LSM5-207ENST00000410044 TSPOAP1O95153 1857 aa23.47■■□□□ 1.35
LSM5-207ENST00000410044 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
LSM5-207ENST00000410044 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
LSM5-207ENST00000410044 ARHGAP5Q13017 1502 aa23.44■■□□□ 1.34
LSM5-207ENST00000410044 FANCAO15360 1455 aa23.44■■□□□ 1.34
LSM5-207ENST00000410044 NEO1Q92859 1461 aa23.44■■□□□ 1.34
LSM5-207ENST00000410044 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
LSM5-207ENST00000410044 FGD6Q6ZV73 1430 aa23.42■■□□□ 1.34
LSM5-207ENST00000410044 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
LSM5-207ENST00000410044 TCOF1Q13428 1488 aaKnown RBP23.37■■□□□ 1.33
LSM5-207ENST00000410044 SAMD9LQ8IVG5 1584 aa23.37■■□□□ 1.33
LSM5-207ENST00000410044 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
LSM5-207ENST00000410044 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
LSM5-207ENST00000410044 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
LSM5-207ENST00000410044 ZNF644Q9H582 1327 aaPredicted RBP23.35■■□□□ 1.33
LSM5-207ENST00000410044 PTPN23Q9H3S7 1636 aa23.35■■□□□ 1.33
LSM5-207ENST00000410044 ZNF777Q9ULD5 760 aaPredicted RBP23.35■■□□□ 1.33
LSM5-207ENST00000410044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.35■■□□□ 1.33
LSM5-207ENST00000410044 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
LSM5-207ENST00000410044 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
LSM5-207ENST00000410044 ABCC1P33527 1531 aa23.32■■□□□ 1.32
LSM5-207ENST00000410044 ADGRL1O94910 1474 aa23.31■■□□□ 1.32
LSM5-207ENST00000410044 SCAPERQ9BY12 1400 aa23.31■■□□□ 1.32
LSM5-207ENST00000410044 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
LSM5-207ENST00000410044 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
LSM5-207ENST00000410044 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.32
LSM5-207ENST00000410044 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
LSM5-207ENST00000410044 COL17A1Q9UMD9 1497 aaPredicted RBP23.26■■□□□ 1.31
LSM5-207ENST00000410044 ARHGEF5Q12774 1597 aa23.26■■□□□ 1.31
LSM5-207ENST00000410044 SYCP2Q9BX26 1530 aa23.25■■□□□ 1.31
LSM5-207ENST00000410044 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
LSM5-207ENST00000410044 TRAPPC8Q9Y2L5 1435 aa23.23■■□□□ 1.31
LSM5-207ENST00000410044 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
LSM5-207ENST00000410044 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
LSM5-207ENST00000410044 ZNF518AQ6AHZ1 1483 aa23.21■■□□□ 1.31
LSM5-207ENST00000410044 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
LSM5-207ENST00000410044 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
LSM5-207ENST00000410044 CCDC141Q6ZP82 1450 aa23.19■■□□□ 1.3
LSM5-207ENST00000410044 ABCC5O15440 1437 aa23.19■■□□□ 1.3
LSM5-207ENST00000410044 RAPGEF3O95398 923 aa23.19■■□□□ 1.3
LSM5-207ENST00000410044 KDM6BO15054 1643 aa23.18■■□□□ 1.3
LSM5-207ENST00000410044 KDM5CP41229 1560 aa23.18■■□□□ 1.3
LSM5-207ENST00000410044 DAPK1P53355 1430 aa23.17■■□□□ 1.3
LSM5-207ENST00000410044 FRMPD1Q5SYB0 1578 aa23.17■■□□□ 1.3
LSM5-207ENST00000410044 TSPY4P0CV99 314 aa23.16■■□□□ 1.3
LSM5-207ENST00000410044 TSPY10P0CW01 314 aa23.16■■□□□ 1.3
LSM5-207ENST00000410044 RTEL1-TNFRSF6BF6WH68 1400 aa23.15■■□□□ 1.3
LSM5-207ENST00000410044 ZMYM4Q5VZL5 1548 aa23.14■■□□□ 1.3
LSM5-207ENST00000410044 MLH3Q9UHC1 1453 aa23.14■■□□□ 1.29
LSM5-207ENST00000410044 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
LSM5-207ENST00000410044 MAST1Q9Y2H9 1570 aa23.13■■□□□ 1.29
LSM5-207ENST00000410044 CROCC2H7BZ55 1655 aa23.13■■□□□ 1.29
LSM5-207ENST00000410044 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
LSM5-207ENST00000410044 SPAG9O60271 1321 aaKnown RBP23.11■■□□□ 1.29
LSM5-207ENST00000410044 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
LSM5-207ENST00000410044 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
LSM5-207ENST00000410044 KIDINS220Q9ULH0 1771 aa23.08■■□□□ 1.29
LSM5-207ENST00000410044 C9orf84Q5VXU9 1444 aa23.08■■□□□ 1.28
LSM5-207ENST00000410044 HECW2Q9P2P5 1572 aa23.07■■□□□ 1.28
LSM5-207ENST00000410044 INO80Q9ULG1 1556 aaPredicted RBP23.07■■□□□ 1.28
LSM5-207ENST00000410044 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
LSM5-207ENST00000410044 ATP7AQ04656 1500 aa23.06■■□□□ 1.28
LSM5-207ENST00000410044 ROCK1Q13464 1354 aa23.05■■□□□ 1.28
LSM5-207ENST00000410044 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
LSM5-207ENST00000410044 ITGAEP38570 1179 aa23.04■■□□□ 1.28
LSM5-207ENST00000410044 NCOA1Q15788 1441 aa23.04■■□□□ 1.28
LSM5-207ENST00000410044 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
LSM5-207ENST00000410044 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
LSM5-207ENST00000410044 ADGBQ8N7X0 1667 aa23.01■■□□□ 1.27
LSM5-207ENST00000410044 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
LSM5-207ENST00000410044 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
LSM5-207ENST00000410044 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
LSM5-207ENST00000410044 ATP10AO60312 1499 aa22.98■■□□□ 1.27
LSM5-207ENST00000410044 DIP2CQ9Y2E4 1556 aa22.97■■□□□ 1.27
LSM5-207ENST00000410044 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
LSM5-207ENST00000410044 ARHGEF40Q8TER5 1519 aa22.95■■□□□ 1.26
LSM5-207ENST00000410044 RRP7BPQ9NSQ0 103 aa22.95■■□□□ 1.26
LSM5-207ENST00000410044 REREQ9P2R6 1566 aa22.95■■□□□ 1.26
LSM5-207ENST00000410044 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
LSM5-207ENST00000410044 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
LSM5-207ENST00000410044 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
LSM5-207ENST00000410044 A2MP01023 1474 aa22.92■■□□□ 1.26
LSM5-207ENST00000410044 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
LSM5-207ENST00000410044 NAIPQ13075 1403 aa22.91■■□□□ 1.26
LSM5-207ENST00000410044 AGLP35573 1532 aa22.87■■□□□ 1.25
LSM5-207ENST00000410044 ERBINQ96RT1 1412 aa22.87■■□□□ 1.25
LSM5-207ENST00000410044 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
LSM5-207ENST00000410044 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
LSM5-207ENST00000410044 BCORL1Q5H9F3 1711 aa22.85■■□□□ 1.25
LSM5-207ENST00000410044 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.25
LSM5-207ENST00000410044 EIF2AK4Q9P2K8 1649 aaKnown RBP22.83■■□□□ 1.25
LSM5-207ENST00000410044 HRCP23327 699 aa22.82■■□□□ 1.24
LSM5-207ENST00000410044 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
LSM5-207ENST00000410044 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
LSM5-207ENST00000410044 ACIN1Q9UKV3 1341 aaKnown RBP22.8■■□□□ 1.24
LSM5-207ENST00000410044 KIF3BO15066 747 aa22.79■■□□□ 1.24
LSM5-207ENST00000410044 PPP6R1Q9UPN7 881 aa22.76■■□□□ 1.23
LSM5-207ENST00000410044 RNF17Q9BXT8 1623 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms