RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 MAGI2Q86UL8 1455 aa27.01■■□□□ 1.91
PDE6D-202ENST00000409772 CCNB3Q8WWL7 1395 aa27■■□□□ 1.91
PDE6D-202ENST00000409772 RICTORQ6R327 1708 aa27■■□□□ 1.91
PDE6D-202ENST00000409772 FRMPD1Q5SYB0 1578 aa26.99■■□□□ 1.91
PDE6D-202ENST00000409772 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
PDE6D-202ENST00000409772 CDC42BPBQ9Y5S2 1711 aa26.98■■□□□ 1.91
PDE6D-202ENST00000409772 POGZQ7Z3K3 1410 aa26.98■■□□□ 1.91
PDE6D-202ENST00000409772 PREX2Q70Z35 1606 aa26.98■■□□□ 1.91
PDE6D-202ENST00000409772 APLP2Q06481 763 aa26.97■■□□□ 1.91
PDE6D-202ENST00000409772 EHBP1L1Q8N3D4 1523 aa26.96■■□□□ 1.91
PDE6D-202ENST00000409772 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
PDE6D-202ENST00000409772 ZNF518AQ6AHZ1 1483 aa26.95■■□□□ 1.91
PDE6D-202ENST00000409772 ZMYM4Q5VZL5 1548 aa26.95■■□□□ 1.9
PDE6D-202ENST00000409772 ARID4BQ4LE39 1312 aaPredicted RBP26.94■■□□□ 1.9
PDE6D-202ENST00000409772 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
PDE6D-202ENST00000409772 AFAP1Q8N556 730 aa26.93■■□□□ 1.9
PDE6D-202ENST00000409772 CDC42BPAQ5VT25 1732 aa26.93■■□□□ 1.9
PDE6D-202ENST00000409772 MYT1LQ9UL68 1186 aa26.92■■□□□ 1.9
PDE6D-202ENST00000409772 MAP3K1Q13233 1512 aa26.9■■□□□ 1.9
PDE6D-202ENST00000409772 TIAM1Q13009 1591 aa26.9■■□□□ 1.9
PDE6D-202ENST00000409772 ZFYVE16Q7Z3T8 1539 aa26.89■■□□□ 1.89
PDE6D-202ENST00000409772 PLEKHH2Q8IVE3 1493 aa26.87■■□□□ 1.89
PDE6D-202ENST00000409772 ARHGEF40Q8TER5 1519 aa26.87■■□□□ 1.89
PDE6D-202ENST00000409772 KIAA1107Q9UPP5 1409 aa26.85■■□□□ 1.89
PDE6D-202ENST00000409772 LRRC9Q6ZRR7 1453 aa26.84■■□□□ 1.89
PDE6D-202ENST00000409772 SUPT6HQ7KZ85 1726 aaKnown RBP26.84■■□□□ 1.89
PDE6D-202ENST00000409772 ABCC1P33527 1531 aa26.84■■□□□ 1.89
PDE6D-202ENST00000409772 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
PDE6D-202ENST00000409772 ATP10AO60312 1499 aa26.83■■□□□ 1.89
PDE6D-202ENST00000409772 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.88
PDE6D-202ENST00000409772 KDM5CP41229 1560 aa26.82■■□□□ 1.88
PDE6D-202ENST00000409772 NCOA2Q15596 1464 aa26.81■■□□□ 1.88
PDE6D-202ENST00000409772 MLH3Q9UHC1 1453 aa26.81■■□□□ 1.88
PDE6D-202ENST00000409772 ITSN2Q9NZM3 1697 aa26.8■■□□□ 1.88
PDE6D-202ENST00000409772 TRAPPC8Q9Y2L5 1435 aa26.8■■□□□ 1.88
PDE6D-202ENST00000409772 ARHGEF12Q9NZN5 1544 aa26.8■■□□□ 1.88
PDE6D-202ENST00000409772 RSPH4AQ5TD94 716 aa26.78■■□□□ 1.88
PDE6D-202ENST00000409772 SAMD9LQ8IVG5 1584 aa26.77■■□□□ 1.88
PDE6D-202ENST00000409772 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
PDE6D-202ENST00000409772 KANK4Q5T7N3 995 aaPredicted RBP26.77■■□□□ 1.88
PDE6D-202ENST00000409772 SPAG9O60271 1321 aaKnown RBP26.76■■□□□ 1.87
PDE6D-202ENST00000409772 HECW2Q9P2P5 1572 aa26.75■■□□□ 1.87
PDE6D-202ENST00000409772 SYCP2Q9BX26 1530 aa26.73■■□□□ 1.87
PDE6D-202ENST00000409772 BCORL1Q5H9F3 1711 aa26.72■■□□□ 1.87
PDE6D-202ENST00000409772 ZNF644Q9H582 1327 aaPredicted RBP26.71■■□□□ 1.87
PDE6D-202ENST00000409772 ADAMTSL3P82987 1691 aa26.7■■□□□ 1.87
PDE6D-202ENST00000409772 MLECQ14165 292 aa26.68■■□□□ 1.86
PDE6D-202ENST00000409772 REREQ9P2R6 1566 aa26.65■■□□□ 1.86
PDE6D-202ENST00000409772 DIP2CQ9Y2E4 1556 aa26.64■■□□□ 1.86
PDE6D-202ENST00000409772 MBD5Q9P267 1494 aa26.64■■□□□ 1.86
PDE6D-202ENST00000409772 MIA2Q96PC5 1412 aa26.64■■□□□ 1.85
PDE6D-202ENST00000409772 TSPY4P0CV99 314 aa26.63■■□□□ 1.85
PDE6D-202ENST00000409772 TSPY10P0CW01 314 aa26.63■■□□□ 1.85
PDE6D-202ENST00000409772 KIDINS220Q9ULH0 1771 aa26.63■■□□□ 1.85
PDE6D-202ENST00000409772 PTPRMP28827 1452 aa26.62■■□□□ 1.85
PDE6D-202ENST00000409772 RTEL1-TNFRSF6BF6WH68 1400 aa26.61■■□□□ 1.85
PDE6D-202ENST00000409772 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
PDE6D-202ENST00000409772 CAMSAP2Q08AD1 1489 aa26.61■■□□□ 1.85
PDE6D-202ENST00000409772 ABCA6Q8N139 1617 aa26.6■■□□□ 1.85
PDE6D-202ENST00000409772 ESF1Q9H501 851 aaKnown RBP26.59■■□□□ 1.85
PDE6D-202ENST00000409772 AGLP35573 1532 aa26.59■■□□□ 1.85
PDE6D-202ENST00000409772 ATP7AQ04656 1500 aa26.59■■□□□ 1.85
PDE6D-202ENST00000409772 MADDQ8WXG6 1647 aa26.58■■□□□ 1.85
PDE6D-202ENST00000409772 CCDC141Q6ZP82 1450 aa26.57■■□□□ 1.84
PDE6D-202ENST00000409772 SIGLEC1Q9BZZ2 1709 aa26.56■■□□□ 1.84
PDE6D-202ENST00000409772 INO80Q9ULG1 1556 aaPredicted RBP26.53■■□□□ 1.84
PDE6D-202ENST00000409772 ARHGEF5Q12774 1597 aa26.52■■□□□ 1.84
PDE6D-202ENST00000409772 A2MP01023 1474 aa26.51■■□□□ 1.83
PDE6D-202ENST00000409772 RIMS1Q86UR5 1692 aaKnown RBP26.5■■□□□ 1.83
PDE6D-202ENST00000409772 PPP6R1Q9UPN7 881 aa26.49■■□□□ 1.83
PDE6D-202ENST00000409772 FER1L4A9Z1Z3 1794 aa26.48■■□□□ 1.83
PDE6D-202ENST00000409772 DHX29Q7Z478 1369 aaKnown RBP26.47■■□□□ 1.83
PDE6D-202ENST00000409772 ADGBQ8N7X0 1667 aa26.47■■□□□ 1.83
PDE6D-202ENST00000409772 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
PDE6D-202ENST00000409772 CNTLNQ9NXG0 1405 aa26.44■■□□□ 1.82
PDE6D-202ENST00000409772 FGD6Q6ZV73 1430 aa26.42■■□□□ 1.82
PDE6D-202ENST00000409772 GGT6Q6P531 493 aa26.42■■□□□ 1.82
PDE6D-202ENST00000409772 PLXNC1O60486 1568 aa26.41■■□□□ 1.82
PDE6D-202ENST00000409772 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
PDE6D-202ENST00000409772 KIF3BO15066 747 aa26.37■■□□□ 1.81
PDE6D-202ENST00000409772 CEBPAP49715 358 aaPredicted RBP26.37■■□□□ 1.81
PDE6D-202ENST00000409772 MAST1Q9Y2H9 1570 aa26.37■■□□□ 1.81
PDE6D-202ENST00000409772 TCOF1Q13428 1488 aaKnown RBP26.36■■□□□ 1.81
PDE6D-202ENST00000409772 SETD1BQ9UPS6 1966 aaKnown RBP26.33■■□□□ 1.8
PDE6D-202ENST00000409772 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
PDE6D-202ENST00000409772 ABCC5O15440 1437 aa26.31■■□□□ 1.8
PDE6D-202ENST00000409772 ILDR1Q86SU0 546 aaPredicted RBP26.31■■□□□ 1.8
PDE6D-202ENST00000409772 ZMYM3Q14202 1370 aa26.31■■□□□ 1.8
PDE6D-202ENST00000409772 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
PDE6D-202ENST00000409772 DAPK1P53355 1430 aa26.3■■□□□ 1.8
PDE6D-202ENST00000409772 WASHC2CQ9Y4E1 1318 aa26.26■■□□□ 1.79
PDE6D-202ENST00000409772 MROH2AA6NES4 1674 aa26.25■■□□□ 1.79
PDE6D-202ENST00000409772 DNMT1P26358 1616 aaKnown RBP26.25■■□□□ 1.79
PDE6D-202ENST00000409772 LMTK3Q96Q04 1460 aa26.25■■□□□ 1.79
PDE6D-202ENST00000409772 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
PDE6D-202ENST00000409772 RRP7BPQ9NSQ0 103 aa26.24■■□□□ 1.79
PDE6D-202ENST00000409772 C3P01024 1663 aa26.24■■□□□ 1.79
PDE6D-202ENST00000409772 DUOX2Q9NRD8 1548 aa26.24■■□□□ 1.79
PDE6D-202ENST00000409772 FAM135AQ9P2D6 1515 aa26.23■■□□□ 1.79
PDE6D-202ENST00000409772 NPATQ14207 1427 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms