RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 ARHGAP5Q13017 1502 aa28.97■■■□□ 2.23
ITM2C-204ENST00000409704 POGZQ7Z3K3 1410 aa28.95■■■□□ 2.23
ITM2C-204ENST00000409704 CDC42BPAQ5VT25 1732 aa28.93■■■□□ 2.22
ITM2C-204ENST00000409704 ZFYVE16Q7Z3T8 1539 aa28.91■■■□□ 2.22
ITM2C-204ENST00000409704 SCAPERQ9BY12 1400 aa28.91■■■□□ 2.22
ITM2C-204ENST00000409704 BCORL1Q5H9F3 1711 aa28.88■■■□□ 2.21
ITM2C-204ENST00000409704 ADAMTSL3P82987 1691 aa28.87■■■□□ 2.21
ITM2C-204ENST00000409704 MAGI2Q86UL8 1455 aa28.87■■■□□ 2.21
ITM2C-204ENST00000409704 EFCAB2Q5VUJ9 269 aa28.87■■■□□ 2.21
ITM2C-204ENST00000409704 ABCC1P33527 1531 aa28.86■■■□□ 2.21
ITM2C-204ENST00000409704 KDM5CP41229 1560 aa28.85■■■□□ 2.21
ITM2C-204ENST00000409704 ITSN2Q9NZM3 1697 aa28.84■■■□□ 2.21
ITM2C-204ENST00000409704 YEATS2Q9ULM3 1422 aa28.84■■■□□ 2.21
ITM2C-204ENST00000409704 SIGLEC1Q9BZZ2 1709 aa28.83■■■□□ 2.21
ITM2C-204ENST00000409704 ZNF518AQ6AHZ1 1483 aa28.83■■■□□ 2.21
ITM2C-204ENST00000409704 EHBP1L1Q8N3D4 1523 aa28.82■■■□□ 2.2
ITM2C-204ENST00000409704 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
ITM2C-204ENST00000409704 MADDQ8WXG6 1647 aa28.78■■■□□ 2.2
ITM2C-204ENST00000409704 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
ITM2C-204ENST00000409704 MTUS2Q5JR59 1369 aa28.76■■■□□ 2.2
ITM2C-204ENST00000409704 SAMD9LQ8IVG5 1584 aa28.76■■■□□ 2.19
ITM2C-204ENST00000409704 GPATCH8Q9UKJ3 1502 aaKnown RBP28.74■■■□□ 2.19
ITM2C-204ENST00000409704 ARHGEF12Q9NZN5 1544 aa28.74■■■□□ 2.19
ITM2C-204ENST00000409704 TIAM1Q13009 1591 aa28.72■■■□□ 2.19
ITM2C-204ENST00000409704 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
ITM2C-204ENST00000409704 DIP2CQ9Y2E4 1556 aa28.71■■■□□ 2.19
ITM2C-204ENST00000409704 ABCA6Q8N139 1617 aa28.7■■■□□ 2.19
ITM2C-204ENST00000409704 ARID4BQ4LE39 1312 aaPredicted RBP28.69■■■□□ 2.18
ITM2C-204ENST00000409704 C9orf84Q5VXU9 1444 aa28.69■■■□□ 2.18
ITM2C-204ENST00000409704 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
ITM2C-204ENST00000409704 RIMS1Q86UR5 1692 aaKnown RBP28.69■■■□□ 2.18
ITM2C-204ENST00000409704 TRAPPC8Q9Y2L5 1435 aa28.69■■■□□ 2.18
ITM2C-204ENST00000409704 PTPRMP28827 1452 aa28.68■■■□□ 2.18
ITM2C-204ENST00000409704 ATP10AO60312 1499 aa28.67■■■□□ 2.18
ITM2C-204ENST00000409704 MLH3Q9UHC1 1453 aa28.66■■■□□ 2.18
ITM2C-204ENST00000409704 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
ITM2C-204ENST00000409704 REREQ9P2R6 1566 aa28.65■■■□□ 2.18
ITM2C-204ENST00000409704 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
ITM2C-204ENST00000409704 AFAP1Q8N556 730 aa28.64■■■□□ 2.18
ITM2C-204ENST00000409704 FER1L4A9Z1Z3 1794 aa28.64■■■□□ 2.18
ITM2C-204ENST00000409704 KIDINS220Q9ULH0 1771 aa28.63■■■□□ 2.17
ITM2C-204ENST00000409704 PLEKHH2Q8IVE3 1493 aa28.6■■■□□ 2.17
ITM2C-204ENST00000409704 NCOA2Q15596 1464 aa28.56■■■□□ 2.16
ITM2C-204ENST00000409704 ZNF777Q9ULD5 760 aaPredicted RBP28.56■■■□□ 2.16
ITM2C-204ENST00000409704 INO80Q9ULG1 1556 aaPredicted RBP28.56■■■□□ 2.16
ITM2C-204ENST00000409704 KIAA1107Q9UPP5 1409 aa28.56■■■□□ 2.16
ITM2C-204ENST00000409704 CFDP1Q9UEE9 299 aaPredicted RBP28.54■■■□□ 2.16
ITM2C-204ENST00000409704 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
ITM2C-204ENST00000409704 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
ITM2C-204ENST00000409704 ATP7AQ04656 1500 aa28.52■■■□□ 2.16
ITM2C-204ENST00000409704 MYT1LQ9UL68 1186 aa28.51■■■□□ 2.15
ITM2C-204ENST00000409704 AGLP35573 1532 aa28.51■■■□□ 2.15
ITM2C-204ENST00000409704 MLECQ14165 292 aa28.47■■■□□ 2.15
ITM2C-204ENST00000409704 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.14
ITM2C-204ENST00000409704 CAMSAP2Q08AD1 1489 aa28.45■■■□□ 2.14
ITM2C-204ENST00000409704 MBD5Q9P267 1494 aa28.44■■■□□ 2.14
ITM2C-204ENST00000409704 PLXNC1O60486 1568 aa28.43■■■□□ 2.14
ITM2C-204ENST00000409704 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
ITM2C-204ENST00000409704 ZNF644Q9H582 1327 aaPredicted RBP28.41■■■□□ 2.14
ITM2C-204ENST00000409704 ADGBQ8N7X0 1667 aa28.4■■■□□ 2.14
ITM2C-204ENST00000409704 LMTK3Q96Q04 1460 aa28.39■■■□□ 2.13
ITM2C-204ENST00000409704 CCDC141Q6ZP82 1450 aa28.37■■■□□ 2.13
ITM2C-204ENST00000409704 ARHGEF5Q12774 1597 aa28.35■■■□□ 2.13
ITM2C-204ENST00000409704 A2MP01023 1474 aa28.34■■■□□ 2.13
ITM2C-204ENST00000409704 KANK4Q5T7N3 995 aaPredicted RBP28.33■■■□□ 2.13
ITM2C-204ENST00000409704 C3P01024 1663 aa28.32■■■□□ 2.12
ITM2C-204ENST00000409704 PREX1Q8TCU6 1659 aa28.31■■■□□ 2.12
ITM2C-204ENST00000409704 RTEL1-TNFRSF6BF6WH68 1400 aa28.3■■■□□ 2.12
ITM2C-204ENST00000409704 MYOM3Q5VTT5 1437 aa28.29■■■□□ 2.12
ITM2C-204ENST00000409704 PLPPR3Q6T4P5 718 aa28.29■■■□□ 2.12
ITM2C-204ENST00000409704 MROH2AA6NES4 1674 aa28.29■■■□□ 2.12
ITM2C-204ENST00000409704 MIA2Q96PC5 1412 aa28.25■■■□□ 2.11
ITM2C-204ENST00000409704 CNTLNQ9NXG0 1405 aa28.24■■■□□ 2.11
ITM2C-204ENST00000409704 MAST1Q9Y2H9 1570 aa28.23■■■□□ 2.11
ITM2C-204ENST00000409704 CLTCQ00610 1675 aaKnown RBP28.22■■■□□ 2.11
ITM2C-204ENST00000409704 CEBPAP49715 358 aaPredicted RBP28.19■■■□□ 2.1
ITM2C-204ENST00000409704 APLP2Q06481 763 aa28.19■■■□□ 2.1
ITM2C-204ENST00000409704 RSPH4AQ5TD94 716 aa28.18■■■□□ 2.1
ITM2C-204ENST00000409704 CROCC2H7BZ55 1655 aa28.18■■■□□ 2.1
ITM2C-204ENST00000409704 PTPN23Q9H3S7 1636 aa28.17■■■□□ 2.1
ITM2C-204ENST00000409704 ESF1Q9H501 851 aaKnown RBP28.16■■■□□ 2.1
ITM2C-204ENST00000409704 DHX29Q7Z478 1369 aaKnown RBP28.14■■■□□ 2.1
ITM2C-204ENST00000409704 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
ITM2C-204ENST00000409704 SETD1BQ9UPS6 1966 aaKnown RBP28.12■■■□□ 2.09
ITM2C-204ENST00000409704 HSPA2P54652 639 aa28.1■■■□□ 2.09
ITM2C-204ENST00000409704 FAM135AQ9P2D6 1515 aa28.09■■■□□ 2.09
ITM2C-204ENST00000409704 FGD6Q6ZV73 1430 aa28.09■■■□□ 2.09
ITM2C-204ENST00000409704 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
ITM2C-204ENST00000409704 SHANK2Q9UPX8 1470 aa28.08■■■□□ 2.09
ITM2C-204ENST00000409704 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
ITM2C-204ENST00000409704 NPATQ14207 1427 aa28.07■■■□□ 2.08
ITM2C-204ENST00000409704 EIF2AK4Q9P2K8 1649 aaKnown RBP28.07■■■□□ 2.08
ITM2C-204ENST00000409704 TSPY4P0CV99 314 aa28.06■■■□□ 2.08
ITM2C-204ENST00000409704 TSPY10P0CW01 314 aa28.06■■■□□ 2.08
ITM2C-204ENST00000409704 RNF17Q9BXT8 1623 aaKnown RBP28.06■■■□□ 2.08
ITM2C-204ENST00000409704 GGT6Q6P531 493 aa28.05■■■□□ 2.08
ITM2C-204ENST00000409704 KDM5DQ9BY66 1539 aa28.05■■■□□ 2.08
ITM2C-204ENST00000409704 MYO3AQ8NEV4 1616 aa28.04■■■□□ 2.08
ITM2C-204ENST00000409704 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
ITM2C-204ENST00000409704 ZNF142P52746 1687 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms