RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 UGGT2Q9NYU1 1516 aa11.75□□□□□ -0.53
SH3D19-202ENST00000409252 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
SH3D19-202ENST00000409252 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
SH3D19-202ENST00000409252 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
SH3D19-202ENST00000409252 CD109Q6YHK3 1445 aa11.74□□□□□ -0.53
SH3D19-202ENST00000409252 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
SH3D19-202ENST00000409252 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
SH3D19-202ENST00000409252 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
SH3D19-202ENST00000409252 PLEKHH2Q8IVE3 1493 aa11.72□□□□□ -0.53
SH3D19-202ENST00000409252 FOXD1Q16676 465 aa11.72□□□□□ -0.53
SH3D19-202ENST00000409252 KIF14Q15058 1648 aa11.72□□□□□ -0.53
SH3D19-202ENST00000409252 RAPGEF6Q8TEU7 1601 aa11.72□□□□□ -0.53
SH3D19-202ENST00000409252 ARHGEF11O15085 1522 aa11.72□□□□□ -0.53
SH3D19-202ENST00000409252 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.54
SH3D19-202ENST00000409252 KIF15Q9NS87 1388 aa11.71□□□□□ -0.54
SH3D19-202ENST00000409252 SUPT6HQ7KZ85 1726 aaKnown RBP11.71□□□□□ -0.54
SH3D19-202ENST00000409252 RAPGEF3O95398 923 aa11.71□□□□□ -0.54
SH3D19-202ENST00000409252 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.54
SH3D19-202ENST00000409252 CHD1O14646 1710 aa11.7□□□□□ -0.54
SH3D19-202ENST00000409252 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
SH3D19-202ENST00000409252 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
SH3D19-202ENST00000409252 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
SH3D19-202ENST00000409252 DCAF11Q8TEB1 546 aa11.68□□□□□ -0.54
SH3D19-202ENST00000409252 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
SH3D19-202ENST00000409252 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
SH3D19-202ENST00000409252 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
SH3D19-202ENST00000409252 DIEXFQ68CQ4 756 aaKnown RBP11.66□□□□□ -0.54
SH3D19-202ENST00000409252 ANP32CO43423 234 aa11.66□□□□□ -0.54
SH3D19-202ENST00000409252 POGKQ9P215 609 aa11.66□□□□□ -0.54
SH3D19-202ENST00000409252 ATP10BO94823 1461 aa11.66□□□□□ -0.54
SH3D19-202ENST00000409252 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
SH3D19-202ENST00000409252 DISP1Q96F81 1524 aa11.65□□□□□ -0.54
SH3D19-202ENST00000409252 NUP153P49790 1475 aaKnown RBP11.65□□□□□ -0.54
SH3D19-202ENST00000409252 CARD11Q9BXL7 1154 aa11.65□□□□□ -0.54
SH3D19-202ENST00000409252 ADGRL1O94910 1474 aa11.65□□□□□ -0.54
SH3D19-202ENST00000409252 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.55
SH3D19-202ENST00000409252 EID1Q9Y6B2 187 aa11.64□□□□□ -0.55
SH3D19-202ENST00000409252 C9orf84Q5VXU9 1444 aa11.64□□□□□ -0.55
SH3D19-202ENST00000409252 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
SH3D19-202ENST00000409252 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.55
SH3D19-202ENST00000409252 ANKRD50Q9ULJ7 1429 aa11.63□□□□□ -0.55
SH3D19-202ENST00000409252 FANCAO15360 1455 aa11.62□□□□□ -0.55
SH3D19-202ENST00000409252 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
SH3D19-202ENST00000409252 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
SH3D19-202ENST00000409252 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
SH3D19-202ENST00000409252 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
SH3D19-202ENST00000409252 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
SH3D19-202ENST00000409252 HIRIP3Q9BW71 556 aaPredicted RBP11.6□□□□□ -0.55
SH3D19-202ENST00000409252 POGZQ7Z3K3 1410 aa11.6□□□□□ -0.55
SH3D19-202ENST00000409252 CAMSAP2Q08AD1 1489 aa11.59□□□□□ -0.55
SH3D19-202ENST00000409252 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
SH3D19-202ENST00000409252 CCDC144AA2RUR9 1427 aa11.59□□□□□ -0.55
SH3D19-202ENST00000409252 CCDC141Q6ZP82 1450 aa11.59□□□□□ -0.55
SH3D19-202ENST00000409252 NEFMP07197 916 aa11.59□□□□□ -0.55
SH3D19-202ENST00000409252 MAP3K1Q13233 1512 aa11.58□□□□□ -0.55
SH3D19-202ENST00000409252 STK26Q9P289 416 aa11.58□□□□□ -0.56
SH3D19-202ENST00000409252 DAPK1P53355 1430 aa11.58□□□□□ -0.56
SH3D19-202ENST00000409252 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
SH3D19-202ENST00000409252 AKNAQ7Z591 1439 aa11.57□□□□□ -0.56
SH3D19-202ENST00000409252 SAFB2Q14151 953 aaKnown RBP eCLIP11.56□□□□□ -0.56
SH3D19-202ENST00000409252 NEFLP07196 543 aa11.56□□□□□ -0.56
SH3D19-202ENST00000409252 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
SH3D19-202ENST00000409252 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
SH3D19-202ENST00000409252 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
SH3D19-202ENST00000409252 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
SH3D19-202ENST00000409252 SAMD9Q5K651 1589 aa11.55□□□□□ -0.56
SH3D19-202ENST00000409252 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
SH3D19-202ENST00000409252 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
SH3D19-202ENST00000409252 PLCH2O75038 1416 aa11.54□□□□□ -0.56
SH3D19-202ENST00000409252 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
SH3D19-202ENST00000409252 LMOD2Q6P5Q4 547 aa11.52□□□□□ -0.56
SH3D19-202ENST00000409252 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.56
SH3D19-202ENST00000409252 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
SH3D19-202ENST00000409252 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
SH3D19-202ENST00000409252 ROCK2O75116 1388 aaKnown RBP11.51□□□□□ -0.57
SH3D19-202ENST00000409252 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
SH3D19-202ENST00000409252 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
SH3D19-202ENST00000409252 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
SH3D19-202ENST00000409252 ERCC6L2Q5T890 1561 aa11.49□□□□□ -0.57
SH3D19-202ENST00000409252 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
SH3D19-202ENST00000409252 ABCC5O15440 1437 aa11.49□□□□□ -0.57
SH3D19-202ENST00000409252 TMF1P82094 1093 aa11.48□□□□□ -0.57
SH3D19-202ENST00000409252 DHX57Q6P158 1386 aaKnown RBP11.48□□□□□ -0.57
SH3D19-202ENST00000409252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.57
SH3D19-202ENST00000409252 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
SH3D19-202ENST00000409252 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.47□□□□□ -0.57
SH3D19-202ENST00000409252 SYCP2Q9BX26 1530 aa11.46□□□□□ -0.57
SH3D19-202ENST00000409252 ZNF518AQ6AHZ1 1483 aa11.46□□□□□ -0.57
SH3D19-202ENST00000409252 EIF3AQ14152 1382 aaKnown RBP11.46□□□□□ -0.58
SH3D19-202ENST00000409252 HFM1A2PYH4 1435 aa11.46□□□□□ -0.58
SH3D19-202ENST00000409252 ROCK1Q13464 1354 aa11.46□□□□□ -0.58
SH3D19-202ENST00000409252 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
SH3D19-202ENST00000409252 ABCA8O94911 1581 aa11.45□□□□□ -0.58
SH3D19-202ENST00000409252 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
SH3D19-202ENST00000409252 CLASP1Q7Z460 1538 aa11.44□□□□□ -0.58
SH3D19-202ENST00000409252 TRAK1Q9UPV9 953 aa11.43□□□□□ -0.58
SH3D19-202ENST00000409252 KDM5BQ9UGL1 1544 aa11.42□□□□□ -0.58
SH3D19-202ENST00000409252 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
SH3D19-202ENST00000409252 THEMISQ8N1K5 641 aaPredicted RBP11.42□□□□□ -0.58
SH3D19-202ENST00000409252 KIAA1107Q9UPP5 1409 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms