RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 ZNF592Q92610 1267 aa6.47□□□□□ -1.37
GTDC1-206ENST00000409214 STK24Q9Y6E0 443 aa6.46□□□□□ -1.37
GTDC1-206ENST00000409214 A6NJR5 290 aa6.45□□□□□ -1.38
GTDC1-206ENST00000409214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.45□□□□□ -1.38
GTDC1-206ENST00000409214 HNRNPUL2Q1KMD3 747 aaKnown RBP6.45□□□□□ -1.38
GTDC1-206ENST00000409214 RSPH4AQ5TD94 716 aa6.45□□□□□ -1.38
GTDC1-206ENST00000409214 KDM4AO75164 1064 aa6.44□□□□□ -1.38
GTDC1-206ENST00000409214 ARHGEF1Q92888 912 aaKnown RBP6.44□□□□□ -1.38
GTDC1-206ENST00000409214 SMARCA5O60264 1052 aaPredicted RBP6.44□□□□□ -1.38
GTDC1-206ENST00000409214 FLIIQ13045 1269 aa6.44□□□□□ -1.38
GTDC1-206ENST00000409214 KRI1Q8N9T8 703 aaKnown RBP6.44□□□□□ -1.38
GTDC1-206ENST00000409214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.43□□□□□ -1.38
GTDC1-206ENST00000409214 MCM6Q14566 821 aa6.43□□□□□ -1.38
GTDC1-206ENST00000409214 FNBP4Q8N3X1 1017 aaPredicted RBP6.43□□□□□ -1.38
GTDC1-206ENST00000409214 ARIH1Q9Y4X5 557 aaPredicted RBP6.42□□□□□ -1.38
GTDC1-206ENST00000409214 CCDC125Q86Z20 511 aa6.41□□□□□ -1.38
GTDC1-206ENST00000409214 ZNF526Q8TF50 670 aaPredicted RBP6.41□□□□□ -1.38
GTDC1-206ENST00000409214 PROSER2Q86WR7 435 aaPredicted RBP6.41□□□□□ -1.38
GTDC1-206ENST00000409214 CCDC97Q96F63 343 aaPredicted RBP6.41□□□□□ -1.38
GTDC1-206ENST00000409214 BCL11AQ9H165 835 aa6.41□□□□□ -1.38
GTDC1-206ENST00000409214 IGSF5Q9NSI5 407 aa6.4□□□□□ -1.38
GTDC1-206ENST00000409214 MLLT3P42568 568 aaPredicted RBP6.39□□□□□ -1.39
GTDC1-206ENST00000409214 RBM42Q9BTD8 480 aaKnown RBP6.39□□□□□ -1.39
GTDC1-206ENST00000409214 ABCB7O75027 752 aa6.39□□□□□ -1.39
GTDC1-206ENST00000409214 E2F4Q16254 413 aa6.38□□□□□ -1.39
GTDC1-206ENST00000409214 PLSCR2Q9NRY7 297 aa6.38□□□□□ -1.39
GTDC1-206ENST00000409214 ARID4BQ4LE39 1312 aaPredicted RBP6.37□□□□□ -1.39
GTDC1-206ENST00000409214 CCDC136Q96JN2 1154 aa6.37□□□□□ -1.39
GTDC1-206ENST00000409214 SERPINA10Q9UK55 444 aa6.37□□□□□ -1.39
GTDC1-206ENST00000409214 KIAA1522Q9P206 1035 aaPredicted RBP6.36□□□□□ -1.39
GTDC1-206ENST00000409214 GPIHBP1Q8IV16 184 aa6.36□□□□□ -1.39
GTDC1-206ENST00000409214 A0A0U1RQG5 324 aaPredicted RBP6.36□□□□□ -1.39
GTDC1-206ENST00000409214 PRDM16Q9HAZ2 1276 aa6.36□□□□□ -1.39
GTDC1-206ENST00000409214 CADPSQ9ULU8 1353 aa6.35□□□□□ -1.39
GTDC1-206ENST00000409214 MYT1LQ9UL68 1186 aa6.35□□□□□ -1.39
GTDC1-206ENST00000409214 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.35□□□□□ -1.39
GTDC1-206ENST00000409214 VGFO15240 615 aaPredicted RBP6.34□□□□□ -1.39
GTDC1-206ENST00000409214 CCDC27Q2M243 656 aa6.34□□□□□ -1.39
GTDC1-206ENST00000409214 PARP9Q8IXQ6 854 aa6.34□□□□□ -1.39
GTDC1-206ENST00000409214 STAG3Q9UJ98 1225 aa6.33□□□□□ -1.4
GTDC1-206ENST00000409214 PPP1R37O75864 691 aa6.33□□□□□ -1.4
GTDC1-206ENST00000409214 CHRDL2Q6WN34 429 aa6.33□□□□□ -1.4
GTDC1-206ENST00000409214 PCGF6Q9BYE7 350 aa6.33□□□□□ -1.4
GTDC1-206ENST00000409214 IVNS1ABPQ9Y6Y0 642 aa6.32□□□□□ -1.4
GTDC1-206ENST00000409214 SIRT1Q96EB6 747 aa6.31□□□□□ -1.4
GTDC1-206ENST00000409214 PSMD1Q99460 953 aa6.31□□□□□ -1.4
GTDC1-206ENST00000409214 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
GTDC1-206ENST00000409214 TICAM2Q86XR7 235 aa6.3□□□□□ -1.4
GTDC1-206ENST00000409214 ZNF662Q6ZS27 426 aa6.3□□□□□ -1.4
GTDC1-206ENST00000409214 BRD1O95696 1058 aa6.29□□□□□ -1.4
GTDC1-206ENST00000409214 NUBP1P53384 320 aa6.29□□□□□ -1.4
GTDC1-206ENST00000409214 SKIV2LQ15477 1246 aaKnown RBP6.29□□□□□ -1.4
GTDC1-206ENST00000409214 BCCIPQ9P287 314 aaKnown RBP eCLIP6.29□□□□□ -1.4
GTDC1-206ENST00000409214 DDRGK1Q96HY6 314 aa6.28□□□□□ -1.4
GTDC1-206ENST00000409214 PPARGC1BQ86YN6 1023 aaKnown RBP6.28□□□□□ -1.4
GTDC1-206ENST00000409214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.27□□□□□ -1.41
GTDC1-206ENST00000409214 GPR37O15354 613 aa6.27□□□□□ -1.41
GTDC1-206ENST00000409214 DCAF8Q5TAQ9 597 aa6.27□□□□□ -1.41
GTDC1-206ENST00000409214 MRRFQ96E11 262 aaKnown RBP6.27□□□□□ -1.41
GTDC1-206ENST00000409214 SPATA32Q96LK8 384 aa6.27□□□□□ -1.41
GTDC1-206ENST00000409214 COG6Q9Y2V7 657 aa6.27□□□□□ -1.41
GTDC1-206ENST00000409214 NCKAP5LQ9HCH0 1330 aa6.27□□□□□ -1.41
GTDC1-206ENST00000409214 SP7Q8TDD2 431 aaPredicted RBP6.27□□□□□ -1.41
GTDC1-206ENST00000409214 MS4A1P11836 297 aa6.26□□□□□ -1.41
GTDC1-206ENST00000409214 PPP1R1BQ9UD71 204 aaPredicted RBP6.26□□□□□ -1.41
GTDC1-206ENST00000409214 CCDC102AQ96A19 550 aa6.26□□□□□ -1.41
GTDC1-206ENST00000409214 RYDENQ9NUL5 291 aaKnown RBP6.26□□□□□ -1.41
GTDC1-206ENST00000409214 NEFLP07196 543 aa6.25□□□□□ -1.41
GTDC1-206ENST00000409214 SND1Q7KZF4 910 aaKnown RBP eCLIP6.25□□□□□ -1.41
GTDC1-206ENST00000409214 POM121CA8CG34 1229 aa6.25□□□□□ -1.41
GTDC1-206ENST00000409214 PABPN1Q86U42 306 aaKnown RBP eCLIP6.25□□□□□ -1.41
GTDC1-206ENST00000409214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.25□□□□□ -1.41
GTDC1-206ENST00000409214 RFX1P22670 979 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 TXNDC2Q86VQ3 553 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 MFRPQ9BY79 579 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
GTDC1-206ENST00000409214 GSE1Q14687 1217 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 FBXO31Q5XUX0 539 aaPredicted RBP6.24□□□□□ -1.41
GTDC1-206ENST00000409214 CC2D2BQ6DHV5 1058 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 GIMAP6Q6P9H5 292 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 REPIN1Q9BWE0 567 aaKnown RBP6.24□□□□□ -1.41
GTDC1-206ENST00000409214 NOM1Q5C9Z4 860 aaKnown RBP6.24□□□□□ -1.41
GTDC1-206ENST00000409214 PRDM10Q9NQV6 1147 aa6.24□□□□□ -1.41
GTDC1-206ENST00000409214 PYGBP11216 843 aa6.23□□□□□ -1.41
GTDC1-206ENST00000409214 SMYD5Q6GMV2 418 aa6.23□□□□□ -1.41
GTDC1-206ENST00000409214 FECHP22830 423 aa6.23□□□□□ -1.41
GTDC1-206ENST00000409214 SNRKQ9NRH2 765 aa6.22□□□□□ -1.41
GTDC1-206ENST00000409214 PROCA1Q8NCQ7 364 aaPredicted RBP6.22□□□□□ -1.41
GTDC1-206ENST00000409214 MARCH6O60337 910 aa6.21□□□□□ -1.41
GTDC1-206ENST00000409214 OSCARQ8IYS5 282 aa6.21□□□□□ -1.41
GTDC1-206ENST00000409214 KCNA1Q09470 495 aa6.21□□□□□ -1.42
GTDC1-206ENST00000409214 NOL8Q76FK4 1167 aaKnown RBP6.21□□□□□ -1.42
GTDC1-206ENST00000409214 LOC102724159A0A0B4J2E5 919 aa6.21□□□□□ -1.42
GTDC1-206ENST00000409214 FOSBP53539 338 aa6.21□□□□□ -1.42
GTDC1-206ENST00000409214 PWP2Q15269 919 aaKnown RBP6.21□□□□□ -1.42
GTDC1-206ENST00000409214 RBM47A0AV96 593 aaKnown RBP6.2□□□□□ -1.42
GTDC1-206ENST00000409214 CLSTN1O94985 981 aa6.2□□□□□ -1.42
GTDC1-206ENST00000409214 FGD1P98174 961 aa6.2□□□□□ -1.42
GTDC1-206ENST00000409214 SLC52A1Q9NWF4 448 aa6.2□□□□□ -1.42
GTDC1-206ENST00000409214 ANKRD62A6NC57 917 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms