RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 PCF11O94913 1555 aaKnown RBP32.83■■■□□ 2.85
ITSN2-204ENST00000407704 YEATS2Q9ULM3 1422 aa32.83■■■□□ 2.85
ITSN2-204ENST00000407704 ZFYVE16Q7Z3T8 1539 aa32.82■■■□□ 2.85
ITSN2-204ENST00000407704 RIMS1Q86UR5 1692 aaKnown RBP32.79■■■□□ 2.84
ITSN2-204ENST00000407704 POGZQ7Z3K3 1410 aa32.79■■■□□ 2.84
ITSN2-204ENST00000407704 EFCAB2Q5VUJ9 269 aa32.78■■■□□ 2.84
ITSN2-204ENST00000407704 CLIP1P30622 1438 aa32.77■■■□□ 2.84
ITSN2-204ENST00000407704 CASKIN1Q8WXD9 1431 aa32.77■■■□□ 2.84
ITSN2-204ENST00000407704 MAGI2Q86UL8 1455 aa32.74■■■□□ 2.83
ITSN2-204ENST00000407704 CDC42BPBQ9Y5S2 1711 aa32.74■■■□□ 2.83
ITSN2-204ENST00000407704 ARHGAP5Q13017 1502 aa32.74■■■□□ 2.83
ITSN2-204ENST00000407704 CCDC18Q5T9S5 1454 aa32.7■■■□□ 2.83
ITSN2-204ENST00000407704 MLECQ14165 292 aa32.66■■■□□ 2.82
ITSN2-204ENST00000407704 ILDR1Q86SU0 546 aaPredicted RBP32.65■■■□□ 2.82
ITSN2-204ENST00000407704 PLPPR3Q6T4P5 718 aa32.64■■■□□ 2.82
ITSN2-204ENST00000407704 PREX2Q70Z35 1606 aa32.63■■■□□ 2.81
ITSN2-204ENST00000407704 FYCO1Q9BQS8 1478 aa32.63■■■□□ 2.81
ITSN2-204ENST00000407704 FER1L4A9Z1Z3 1794 aa32.63■■■□□ 2.81
ITSN2-204ENST00000407704 AFAP1Q8N556 730 aa32.62■■■□□ 2.81
ITSN2-204ENST00000407704 ATP10AO60312 1499 aa32.61■■■□□ 2.81
ITSN2-204ENST00000407704 CDC42BPAQ5VT25 1732 aa32.61■■■□□ 2.81
ITSN2-204ENST00000407704 ZNF518AQ6AHZ1 1483 aa32.61■■■□□ 2.81
ITSN2-204ENST00000407704 KDM5CP41229 1560 aa32.58■■■□□ 2.81
ITSN2-204ENST00000407704 C9orf84Q5VXU9 1444 aa32.58■■■□□ 2.81
ITSN2-204ENST00000407704 MYT1LQ9UL68 1186 aa32.55■■■□□ 2.8
ITSN2-204ENST00000407704 LMTK3Q96Q04 1460 aa32.54■■■□□ 2.8
ITSN2-204ENST00000407704 ITSN2Q9NZM3 1697 aa32.54■■■□□ 2.8
ITSN2-204ENST00000407704 ABCC1P33527 1531 aa32.52■■■□□ 2.8
ITSN2-204ENST00000407704 ARHGEF12Q9NZN5 1544 aa32.52■■■□□ 2.8
ITSN2-204ENST00000407704 DIP2CQ9Y2E4 1556 aa32.5■■■□□ 2.79
ITSN2-204ENST00000407704 TRAPPC8Q9Y2L5 1435 aa32.49■■■□□ 2.79
ITSN2-204ENST00000407704 ABCA6Q8N139 1617 aa32.48■■■□□ 2.79
ITSN2-204ENST00000407704 MLH3Q9UHC1 1453 aa32.43■■■□□ 2.78
ITSN2-204ENST00000407704 ZNF777Q9ULD5 760 aaPredicted RBP32.43■■■□□ 2.78
ITSN2-204ENST00000407704 SAMD9LQ8IVG5 1584 aa32.41■■■□□ 2.78
ITSN2-204ENST00000407704 HSPA2P54652 639 aa32.41■■■□□ 2.78
ITSN2-204ENST00000407704 KIDINS220Q9ULH0 1771 aa32.4■■■□□ 2.78
ITSN2-204ENST00000407704 GPATCH8Q9UKJ3 1502 aaKnown RBP32.4■■■□□ 2.78
ITSN2-204ENST00000407704 REREQ9P2R6 1566 aa32.38■■■□□ 2.77
ITSN2-204ENST00000407704 CEBPAP49715 358 aaPredicted RBP32.37■■■□□ 2.77
ITSN2-204ENST00000407704 SYCP2Q9BX26 1530 aa32.35■■■□□ 2.77
ITSN2-204ENST00000407704 CEP162Q5TB80 1403 aa32.33■■■□□ 2.77
ITSN2-204ENST00000407704 MTUS2Q5JR59 1369 aa32.32■■■□□ 2.76
ITSN2-204ENST00000407704 HNRNPMP52272 730 aaKnown RBP eCLIP32.31■■■□□ 2.76
ITSN2-204ENST00000407704 PREX1Q8TCU6 1659 aa32.3■■■□□ 2.76
ITSN2-204ENST00000407704 CCNB3Q8WWL7 1395 aa32.3■■■□□ 2.76
ITSN2-204ENST00000407704 CFDP1Q9UEE9 299 aaPredicted RBP32.28■■■□□ 2.76
ITSN2-204ENST00000407704 AGLP35573 1532 aa32.27■■■□□ 2.76
ITSN2-204ENST00000407704 C3P01024 1663 aa32.25■■■□□ 2.75
ITSN2-204ENST00000407704 SUPT6HQ7KZ85 1726 aaKnown RBP32.23■■■□□ 2.75
ITSN2-204ENST00000407704 TIAM1Q13009 1591 aa32.22■■■□□ 2.75
ITSN2-204ENST00000407704 SPAG9O60271 1321 aaKnown RBP32.22■■■□□ 2.75
ITSN2-204ENST00000407704 EHBP1L1Q8N3D4 1523 aa32.21■■■□□ 2.75
ITSN2-204ENST00000407704 SETD1BQ9UPS6 1966 aaKnown RBP32.21■■■□□ 2.75
ITSN2-204ENST00000407704 KIAA1107Q9UPP5 1409 aa32.19■■■□□ 2.74
ITSN2-204ENST00000407704 PLEKHH2Q8IVE3 1493 aa32.18■■■□□ 2.74
ITSN2-204ENST00000407704 ATP7AQ04656 1500 aa32.18■■■□□ 2.74
ITSN2-204ENST00000407704 INO80Q9ULG1 1556 aaPredicted RBP32.17■■■□□ 2.74
ITSN2-204ENST00000407704 ESF1Q9H501 851 aaKnown RBP32.17■■■□□ 2.74
ITSN2-204ENST00000407704 ZNF644Q9H582 1327 aaPredicted RBP32.17■■■□□ 2.74
ITSN2-204ENST00000407704 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
ITSN2-204ENST00000407704 FBXO41Q8TF61 875 aa32.15■■■□□ 2.74
ITSN2-204ENST00000407704 STRCQ7RTU9 1775 aa32.11■■■□□ 2.73
ITSN2-204ENST00000407704 UHRF1BP1Q6BDS2 1440 aa32.1■■■□□ 2.73
ITSN2-204ENST00000407704 PLXNC1O60486 1568 aa32.07■■■□□ 2.72
ITSN2-204ENST00000407704 A2MP01023 1474 aa32.06■■■□□ 2.72
ITSN2-204ENST00000407704 MBD5Q9P267 1494 aa32.05■■■□□ 2.72
ITSN2-204ENST00000407704 CNTLNQ9NXG0 1405 aa32.05■■■□□ 2.72
ITSN2-204ENST00000407704 MROH2AA6NES4 1674 aa32.05■■■□□ 2.72
ITSN2-204ENST00000407704 ADGBQ8N7X0 1667 aa32.05■■■□□ 2.72
ITSN2-204ENST00000407704 CLTCQ00610 1675 aaKnown RBP32.04■■■□□ 2.72
ITSN2-204ENST00000407704 NCOA2Q15596 1464 aa32.03■■■□□ 2.72
ITSN2-204ENST00000407704 ZMYM3Q14202 1370 aa31.97■■■□□ 2.71
ITSN2-204ENST00000407704 GGT6Q6P531 493 aa31.97■■■□□ 2.71
ITSN2-204ENST00000407704 VPS8Q8N3P4 1428 aa31.97■■■□□ 2.71
ITSN2-204ENST00000407704 CAMSAP2Q08AD1 1489 aa31.96■■■□□ 2.71
ITSN2-204ENST00000407704 CERKQ8TCT0 537 aa31.93■■■□□ 2.7
ITSN2-204ENST00000407704 RTEL1-TNFRSF6BF6WH68 1400 aa31.91■■■□□ 2.7
ITSN2-204ENST00000407704 CCDC141Q6ZP82 1450 aa31.9■■■□□ 2.7
ITSN2-204ENST00000407704 LRRC9Q6ZRR7 1453 aa31.9■■■□□ 2.7
ITSN2-204ENST00000407704 DMRT2Q9Y5R5 561 aa31.89■■■□□ 2.7
ITSN2-204ENST00000407704 NPATQ14207 1427 aa31.89■■■□□ 2.7
ITSN2-204ENST00000407704 DHX29Q7Z478 1369 aaKnown RBP31.84■■■□□ 2.69
ITSN2-204ENST00000407704 KANK4Q5T7N3 995 aaPredicted RBP31.83■■■□□ 2.69
ITSN2-204ENST00000407704 MYO3AQ8NEV4 1616 aa31.82■■■□□ 2.69
ITSN2-204ENST00000407704 PTPRKQ15262 1439 aa31.82■■■□□ 2.68
ITSN2-204ENST00000407704 CAMSAP1Q5T5Y3 1602 aa31.82■■■□□ 2.68
ITSN2-204ENST00000407704 NCOA1Q15788 1441 aa31.81■■■□□ 2.68
ITSN2-204ENST00000407704 ARHGEF5Q12774 1597 aa31.81■■■□□ 2.68
ITSN2-204ENST00000407704 RSPH4AQ5TD94 716 aa31.8■■■□□ 2.68
ITSN2-204ENST00000407704 PTPRTO14522 1441 aa31.8■■■□□ 2.68
ITSN2-204ENST00000407704 KIF3BO15066 747 aa31.78■■■□□ 2.68
ITSN2-204ENST00000407704 PPP6R1Q9UPN7 881 aa31.78■■■□□ 2.68
ITSN2-204ENST00000407704 ZNF142P52746 1687 aaPredicted RBP31.78■■■□□ 2.68
ITSN2-204ENST00000407704 MAP3K1Q13233 1512 aa31.77■■■□□ 2.68
ITSN2-204ENST00000407704 CEP170BQ9Y4F5 1589 aaPredicted RBP31.73■■■□□ 2.67
ITSN2-204ENST00000407704 TSPY4P0CV99 314 aa31.73■■■□□ 2.67
ITSN2-204ENST00000407704 TSPY10P0CW01 314 aa31.73■■■□□ 2.67
ITSN2-204ENST00000407704 NCKAP5LQ9HCH0 1330 aa31.71■■■□□ 2.67
ITSN2-204ENST00000407704 MYOM3Q5VTT5 1437 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms