RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
NLK-201ENST00000407008 KANK1Q14678 1352 aa11.54□□□□□ -0.56
NLK-201ENST00000407008 EIF5BO60841 1220 aaKnown RBP11.54□□□□□ -0.56
NLK-201ENST00000407008 ANP32CO43423 234 aa11.54□□□□□ -0.56
NLK-201ENST00000407008 ESF1Q9H501 851 aaKnown RBP11.54□□□□□ -0.56
NLK-201ENST00000407008 KIF14Q15058 1648 aa11.52□□□□□ -0.56
NLK-201ENST00000407008 MPHOSPH9Q99550 1183 aa11.52□□□□□ -0.56
NLK-201ENST00000407008 DISP1Q96F81 1524 aa11.52□□□□□ -0.56
NLK-201ENST00000407008 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
NLK-201ENST00000407008 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.57
NLK-201ENST00000407008 YTHDC1Q96MU7 727 aaKnown RBP11.52□□□□□ -0.57
NLK-201ENST00000407008 SPAG9O60271 1321 aaKnown RBP11.51□□□□□ -0.57
NLK-201ENST00000407008 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
NLK-201ENST00000407008 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
NLK-201ENST00000407008 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
NLK-201ENST00000407008 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
NLK-201ENST00000407008 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.574e-16■■■■■ 100.1
NLK-201ENST00000407008 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
NLK-201ENST00000407008 NUP155O75694 1391 aa11.5□□□□□ -0.57
NLK-201ENST00000407008 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
NLK-201ENST00000407008 ROCK1Q13464 1354 aa11.49□□□□□ -0.57
NLK-201ENST00000407008 PKD2Q13563 968 aa11.47□□□□□ -0.57
NLK-201ENST00000407008 DAPK1P53355 1430 aa11.47□□□□□ -0.57
NLK-201ENST00000407008 ITSN2Q9NZM3 1697 aa11.47□□□□□ -0.57
NLK-201ENST00000407008 AKNAQ7Z591 1439 aa11.46□□□□□ -0.57
NLK-201ENST00000407008 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.58
NLK-201ENST00000407008 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
NLK-201ENST00000407008 ATP10BO94823 1461 aa11.45□□□□□ -0.58
NLK-201ENST00000407008 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
NLK-201ENST00000407008 NEFLP07196 543 aa11.44□□□□□ -0.58
NLK-201ENST00000407008 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
NLK-201ENST00000407008 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
NLK-201ENST00000407008 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
NLK-201ENST00000407008 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
NLK-201ENST00000407008 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
NLK-201ENST00000407008 NAIPQ13075 1403 aa11.42□□□□□ -0.58
NLK-201ENST00000407008 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
NLK-201ENST00000407008 ARHGEF11O15085 1522 aa11.42□□□□□ -0.58
NLK-201ENST00000407008 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
NLK-201ENST00000407008 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
NLK-201ENST00000407008 ABCC2Q92887 1545 aa11.41□□□□□ -0.58
NLK-201ENST00000407008 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
NLK-201ENST00000407008 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.58
NLK-201ENST00000407008 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.58
NLK-201ENST00000407008 CHD1O14646 1710 aa11.4□□□□□ -0.59
NLK-201ENST00000407008 ABCC5O15440 1437 aa11.39□□□□□ -0.59
NLK-201ENST00000407008 KIF3BO15066 747 aa11.38□□□□□ -0.59
NLK-201ENST00000407008 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
NLK-201ENST00000407008 RGL3Q3MIN7 710 aa11.37□□□□□ -0.59
NLK-201ENST00000407008 ABCA8O94911 1581 aa11.37□□□□□ -0.59
NLK-201ENST00000407008 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
NLK-201ENST00000407008 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
NLK-201ENST00000407008 FOXD1Q16676 465 aa11.35□□□□□ -0.59
NLK-201ENST00000407008 CDCA8Q53HL2 280 aa11.35□□□□□ -0.59
NLK-201ENST00000407008 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
NLK-201ENST00000407008 L3MBTL2Q969R5 705 aa11.34□□□□□ -0.59
NLK-201ENST00000407008 DCAF11Q8TEB1 546 aa11.34□□□□□ -0.59
NLK-201ENST00000407008 NCOA1Q15788 1441 aa11.33□□□□□ -0.6
NLK-201ENST00000407008 UHRF1BP1LA0JNW5 1464 aa11.33□□□□□ -0.6
NLK-201ENST00000407008 GGT6Q6P531 493 aa11.33□□□□□ -0.6
NLK-201ENST00000407008 PLCH2O75038 1416 aa11.32□□□□□ -0.6
NLK-201ENST00000407008 KIAA1107Q9UPP5 1409 aa11.32□□□□□ -0.6
NLK-201ENST00000407008 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
NLK-201ENST00000407008 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
NLK-201ENST00000407008 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
NLK-201ENST00000407008 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
NLK-201ENST00000407008 SCAPERQ9BY12 1400 aa11.31□□□□□ -0.6
NLK-201ENST00000407008 BCANQ96GW7 911 aa11.31□□□□□ -0.6
NLK-201ENST00000407008 ARID4BQ4LE39 1312 aaPredicted RBP11.3□□□□□ -0.6
NLK-201ENST00000407008 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
NLK-201ENST00000407008 CD109Q6YHK3 1445 aa11.3□□□□□ -0.6
NLK-201ENST00000407008 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
NLK-201ENST00000407008 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
NLK-201ENST00000407008 MIER1Q8N108 512 aa11.29□□□□□ -0.6
NLK-201ENST00000407008 AFAP1Q8N556 730 aa11.29□□□□□ -0.6
NLK-201ENST00000407008 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
NLK-201ENST00000407008 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
NLK-201ENST00000407008 HIRIP3Q9BW71 556 aaPredicted RBP11.28□□□□□ -0.6
NLK-201ENST00000407008 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
NLK-201ENST00000407008 ADGRL1O94910 1474 aa11.28□□□□□ -0.6
NLK-201ENST00000407008 FANCAO15360 1455 aa11.28□□□□□ -0.6
NLK-201ENST00000407008 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.6
NLK-201ENST00000407008 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
NLK-201ENST00000407008 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
NLK-201ENST00000407008 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
NLK-201ENST00000407008 KDM5BQ9UGL1 1544 aa11.26□□□□□ -0.61
NLK-201ENST00000407008 ROCK2O75116 1388 aaKnown RBP11.26□□□□□ -0.61
NLK-201ENST00000407008 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
NLK-201ENST00000407008 CLASP1Q7Z460 1538 aa11.24□□□□□ -0.61
NLK-201ENST00000407008 ABCC10Q5T3U5 1492 aa11.24□□□□□ -0.61
NLK-201ENST00000407008 TMF1P82094 1093 aa11.24□□□□□ -0.61
NLK-201ENST00000407008 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
NLK-201ENST00000407008 SYCP2Q9BX26 1530 aa11.23□□□□□ -0.61
NLK-201ENST00000407008 ADCY10Q96PN6 1610 aa11.23□□□□□ -0.61
NLK-201ENST00000407008 DUOX2Q9NRD8 1548 aa11.22□□□□□ -0.61
NLK-201ENST00000407008 ARHGEF5Q12774 1597 aa11.22□□□□□ -0.61
NLK-201ENST00000407008 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.61
NLK-201ENST00000407008 SHROOM2Q13796 1616 aa11.21□□□□□ -0.61
NLK-201ENST00000407008 ERBINQ96RT1 1412 aa11.21□□□□□ -0.61
NLK-201ENST00000407008 GCC2Q8IWJ2 1684 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms