RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 KDM4FA0A1W2PPD8 638 aa16.5■□□□□ 0.23
FAM49A-202ENST00000406434 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
FAM49A-202ENST00000406434 CCDC18Q5T9S5 1454 aa16.5■□□□□ 0.23
FAM49A-202ENST00000406434 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
FAM49A-202ENST00000406434 FANCAO15360 1455 aa16.49■□□□□ 0.23
FAM49A-202ENST00000406434 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
FAM49A-202ENST00000406434 PLCH2O75038 1416 aa16.48■□□□□ 0.23
FAM49A-202ENST00000406434 KIF14Q15058 1648 aa16.47■□□□□ 0.23
FAM49A-202ENST00000406434 DENND4BO75064 1496 aaPredicted RBP16.44■□□□□ 0.22
FAM49A-202ENST00000406434 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
FAM49A-202ENST00000406434 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
FAM49A-202ENST00000406434 SCAPERQ9BY12 1400 aa16.41■□□□□ 0.22
FAM49A-202ENST00000406434 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
FAM49A-202ENST00000406434 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
FAM49A-202ENST00000406434 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
FAM49A-202ENST00000406434 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
FAM49A-202ENST00000406434 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
FAM49A-202ENST00000406434 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
FAM49A-202ENST00000406434 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
FAM49A-202ENST00000406434 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
FAM49A-202ENST00000406434 RICTORQ6R327 1708 aa16.35■□□□□ 0.21
FAM49A-202ENST00000406434 CDC42BPBQ9Y5S2 1711 aa16.35■□□□□ 0.21
FAM49A-202ENST00000406434 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
FAM49A-202ENST00000406434 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
FAM49A-202ENST00000406434 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
FAM49A-202ENST00000406434 POGZQ7Z3K3 1410 aa16.32■□□□□ 0.2
FAM49A-202ENST00000406434 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
FAM49A-202ENST00000406434 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
FAM49A-202ENST00000406434 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
FAM49A-202ENST00000406434 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
FAM49A-202ENST00000406434 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
FAM49A-202ENST00000406434 APLP2Q06481 763 aa16.29■□□□□ 0.2
FAM49A-202ENST00000406434 MLECQ14165 292 aa16.28■□□□□ 0.2
FAM49A-202ENST00000406434 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
FAM49A-202ENST00000406434 EHBP1L1Q8N3D4 1523 aa16.27■□□□□ 0.2
FAM49A-202ENST00000406434 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.2
FAM49A-202ENST00000406434 ZMYM4Q5VZL5 1548 aa16.27■□□□□ 0.19
FAM49A-202ENST00000406434 ZNF518AQ6AHZ1 1483 aa16.26■□□□□ 0.19
FAM49A-202ENST00000406434 TRAPPC8Q9Y2L5 1435 aa16.26■□□□□ 0.19
FAM49A-202ENST00000406434 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
FAM49A-202ENST00000406434 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
FAM49A-202ENST00000406434 KANK4Q5T7N3 995 aaPredicted RBP16.26■□□□□ 0.19
FAM49A-202ENST00000406434 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
FAM49A-202ENST00000406434 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
FAM49A-202ENST00000406434 ABCC1P33527 1531 aa16.23■□□□□ 0.19
FAM49A-202ENST00000406434 ATP10AO60312 1499 aa16.23■□□□□ 0.19
FAM49A-202ENST00000406434 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
FAM49A-202ENST00000406434 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
FAM49A-202ENST00000406434 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
FAM49A-202ENST00000406434 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
FAM49A-202ENST00000406434 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.19
FAM49A-202ENST00000406434 SPAG9O60271 1321 aaKnown RBP16.2■□□□□ 0.18
FAM49A-202ENST00000406434 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
FAM49A-202ENST00000406434 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
FAM49A-202ENST00000406434 SYCP2Q9BX26 1530 aa16.2■□□□□ 0.18
FAM49A-202ENST00000406434 KDM5CP41229 1560 aa16.19■□□□□ 0.18
FAM49A-202ENST00000406434 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
FAM49A-202ENST00000406434 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
FAM49A-202ENST00000406434 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
FAM49A-202ENST00000406434 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
FAM49A-202ENST00000406434 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
FAM49A-202ENST00000406434 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
FAM49A-202ENST00000406434 HECW2Q9P2P5 1572 aa16.18■□□□□ 0.18
FAM49A-202ENST00000406434 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
FAM49A-202ENST00000406434 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
FAM49A-202ENST00000406434 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
FAM49A-202ENST00000406434 PTPRMP28827 1452 aa16.15■□□□□ 0.18
FAM49A-202ENST00000406434 DIP2CQ9Y2E4 1556 aa16.14■□□□□ 0.17
FAM49A-202ENST00000406434 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
FAM49A-202ENST00000406434 ABCA6Q8N139 1617 aa16.13■□□□□ 0.17
FAM49A-202ENST00000406434 RIMS1Q86UR5 1692 aaKnown RBP16.12■□□□□ 0.17
FAM49A-202ENST00000406434 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
FAM49A-202ENST00000406434 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
FAM49A-202ENST00000406434 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
FAM49A-202ENST00000406434 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
FAM49A-202ENST00000406434 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
FAM49A-202ENST00000406434 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
FAM49A-202ENST00000406434 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
FAM49A-202ENST00000406434 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
FAM49A-202ENST00000406434 FER1L4A9Z1Z3 1794 aa16.07■□□□□ 0.16
FAM49A-202ENST00000406434 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
FAM49A-202ENST00000406434 GGT6Q6P531 493 aa16.06■□□□□ 0.16
FAM49A-202ENST00000406434 REREQ9P2R6 1566 aa16.06■□□□□ 0.16
FAM49A-202ENST00000406434 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
FAM49A-202ENST00000406434 A2MP01023 1474 aa16.05■□□□□ 0.16
FAM49A-202ENST00000406434 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
FAM49A-202ENST00000406434 AGLP35573 1532 aa16.04■□□□□ 0.16
FAM49A-202ENST00000406434 MIA2Q96PC5 1412 aa16.04■□□□□ 0.16
FAM49A-202ENST00000406434 INO80Q9ULG1 1556 aaPredicted RBP16.03■□□□□ 0.16
FAM49A-202ENST00000406434 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
FAM49A-202ENST00000406434 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
FAM49A-202ENST00000406434 KIF3BO15066 747 aa16■□□□□ 0.15
FAM49A-202ENST00000406434 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
FAM49A-202ENST00000406434 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
FAM49A-202ENST00000406434 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
FAM49A-202ENST00000406434 ZBTB22O15209 634 aa15.99■□□□□ 0.15
FAM49A-202ENST00000406434 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
FAM49A-202ENST00000406434 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
FAM49A-202ENST00000406434 HSPA2P54652 639 aa15.97■□□□□ 0.15
FAM49A-202ENST00000406434 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms