RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 CCNB3Q8WWL7 1395 aa33.75■■■□□ 2.99
EPCAM-202ENST00000405271 RRBP1Q9P2E9 1410 aaKnown RBP33.74■■■□□ 2.99
EPCAM-202ENST00000405271 PTPN23Q9H3S7 1636 aa33.71■■■□□ 2.99
EPCAM-202ENST00000405271 FGD6Q6ZV73 1430 aa33.71■■■□□ 2.99
EPCAM-202ENST00000405271 GPATCH8Q9UKJ3 1502 aaKnown RBP33.71■■■□□ 2.99
EPCAM-202ENST00000405271 MIA2Q96PC5 1412 aa33.69■■■□□ 2.98
EPCAM-202ENST00000405271 ARAP3Q8WWN8 1544 aa33.68■■■□□ 2.98
EPCAM-202ENST00000405271 TRIM26Q12899 539 aaPredicted RBP33.64■■■□□ 2.98
EPCAM-202ENST00000405271 TCOF1Q13428 1488 aaKnown RBP33.61■■■□□ 2.97
EPCAM-202ENST00000405271 ARHGAP5Q13017 1502 aa33.59■■■□□ 2.97
EPCAM-202ENST00000405271 CFAP74Q9C0B2 1584 aa33.58■■■□□ 2.97
EPCAM-202ENST00000405271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.58■■■□□ 2.97
EPCAM-202ENST00000405271 PLCH2O75038 1416 aa33.57■■■□□ 2.96
EPCAM-202ENST00000405271 NEO1Q92859 1461 aa33.55■■■□□ 2.96
EPCAM-202ENST00000405271 SAMD9LQ8IVG5 1584 aa33.54■■■□□ 2.96
EPCAM-202ENST00000405271 AEBP2Q6ZN18 517 aaPredicted RBP33.53■■■□□ 2.96
EPCAM-202ENST00000405271 CAMSAP2Q08AD1 1489 aa33.53■■■□□ 2.96
EPCAM-202ENST00000405271 CFDP1Q9UEE9 299 aaPredicted RBP33.51■■■□□ 2.95
EPCAM-202ENST00000405271 RAPGEF3O95398 923 aa33.48■■■□□ 2.95
EPCAM-202ENST00000405271 DNMT1P26358 1616 aaKnown RBP33.48■■■□□ 2.95
EPCAM-202ENST00000405271 CROCC2H7BZ55 1655 aa33.48■■■□□ 2.95
EPCAM-202ENST00000405271 FANCAO15360 1455 aa33.45■■■□□ 2.95
EPCAM-202ENST00000405271 KDM4FA0A1W2PPD8 638 aa33.43■■■□□ 2.94
EPCAM-202ENST00000405271 ABCC1P33527 1531 aa33.43■■■□□ 2.94
EPCAM-202ENST00000405271 PLEKHH2Q8IVE3 1493 aa33.43■■■□□ 2.94
EPCAM-202ENST00000405271 AKNAQ7Z591 1439 aa33.42■■■□□ 2.94
EPCAM-202ENST00000405271 ARHGEF5Q12774 1597 aa33.41■■■□□ 2.94
EPCAM-202ENST00000405271 FAM50AQ14320 339 aaKnown RBP33.41■■■□□ 2.94
EPCAM-202ENST00000405271 SYCP2Q9BX26 1530 aa33.37■■■□□ 2.93
EPCAM-202ENST00000405271 EFCAB2Q5VUJ9 269 aa33.37■■■□□ 2.93
EPCAM-202ENST00000405271 ADGBQ8N7X0 1667 aa33.35■■■□□ 2.93
EPCAM-202ENST00000405271 ZNF777Q9ULD5 760 aaPredicted RBP33.34■■■□□ 2.93
EPCAM-202ENST00000405271 KIAA1107Q9UPP5 1409 aa33.33■■■□□ 2.93
EPCAM-202ENST00000405271 DENND4BO75064 1496 aaPredicted RBP33.32■■■□□ 2.93
EPCAM-202ENST00000405271 ZNF644Q9H582 1327 aaPredicted RBP33.32■■■□□ 2.93
EPCAM-202ENST00000405271 PCGF6Q9BYE7 350 aa33.32■■■□□ 2.92
EPCAM-202ENST00000405271 DAPK1P53355 1430 aa33.3■■■□□ 2.92
EPCAM-202ENST00000405271 ADGRL1O94910 1474 aa33.28■■■□□ 2.92
EPCAM-202ENST00000405271 MBD5Q9P267 1494 aa33.28■■■□□ 2.92
EPCAM-202ENST00000405271 CCDC141Q6ZP82 1450 aa33.27■■■□□ 2.92
EPCAM-202ENST00000405271 FRMPD1Q5SYB0 1578 aa33.27■■■□□ 2.92
EPCAM-202ENST00000405271 SCAPERQ9BY12 1400 aa33.26■■■□□ 2.91
EPCAM-202ENST00000405271 SHANK2Q9UPX8 1470 aa33.26■■■□□ 2.91
EPCAM-202ENST00000405271 MAST1Q9Y2H9 1570 aa33.24■■■□□ 2.91
EPCAM-202ENST00000405271 ARHGEF12Q9NZN5 1544 aa33.24■■■□□ 2.91
EPCAM-202ENST00000405271 ABCC5O15440 1437 aa33.24■■■□□ 2.91
EPCAM-202ENST00000405271 GCC2Q8IWJ2 1684 aa33.21■■■□□ 2.91
EPCAM-202ENST00000405271 RICTORQ6R327 1708 aa33.2■■■□□ 2.9
EPCAM-202ENST00000405271 RSPH4AQ5TD94 716 aa33.18■■■□□ 2.9
EPCAM-202ENST00000405271 PTPRKQ15262 1439 aa33.18■■■□□ 2.9
EPCAM-202ENST00000405271 ITGAEP38570 1179 aa33.17■■■□□ 2.9
EPCAM-202ENST00000405271 POGZQ7Z3K3 1410 aa33.16■■■□□ 2.9
EPCAM-202ENST00000405271 HNRNPMP52272 730 aaKnown RBP eCLIP33.14■■■□□ 2.9
EPCAM-202ENST00000405271 ADGRL2O95490 1459 aa33.14■■■□□ 2.9
EPCAM-202ENST00000405271 KDM5CP41229 1560 aa33.13■■■□□ 2.89
EPCAM-202ENST00000405271 PLXNC1O60486 1568 aa33.12■■■□□ 2.89
EPCAM-202ENST00000405271 INO80Q9ULG1 1556 aaPredicted RBP33.12■■■□□ 2.89
EPCAM-202ENST00000405271 ZNF518AQ6AHZ1 1483 aa33.12■■■□□ 2.89
EPCAM-202ENST00000405271 AFAP1Q8N556 730 aa33.12■■■□□ 2.89
EPCAM-202ENST00000405271 C9orf84Q5VXU9 1444 aa33.11■■■□□ 2.89
EPCAM-202ENST00000405271 TRAPPC8Q9Y2L5 1435 aa33.11■■■□□ 2.89
EPCAM-202ENST00000405271 ZMYM4Q5VZL5 1548 aa33.1■■■□□ 2.89
EPCAM-202ENST00000405271 ROCK1Q13464 1354 aa33.1■■■□□ 2.89
EPCAM-202ENST00000405271 MAGI2Q86UL8 1455 aa33.09■■■□□ 2.89
EPCAM-202ENST00000405271 YEATS2Q9ULM3 1422 aa33.07■■■□□ 2.88
EPCAM-202ENST00000405271 ZFYVE16Q7Z3T8 1539 aa33.07■■■□□ 2.88
EPCAM-202ENST00000405271 HECW2Q9P2P5 1572 aa33.06■■■□□ 2.88
EPCAM-202ENST00000405271 ARID4BQ4LE39 1312 aaPredicted RBP33.04■■■□□ 2.88
EPCAM-202ENST00000405271 KIDINS220Q9ULH0 1771 aa33.04■■■□□ 2.88
EPCAM-202ENST00000405271 ATP7AQ04656 1500 aa33.04■■■□□ 2.88
EPCAM-202ENST00000405271 ARHGEF40Q8TER5 1519 aa33.04■■■□□ 2.88
EPCAM-202ENST00000405271 HFM1A2PYH4 1435 aa33.03■■■□□ 2.88
EPCAM-202ENST00000405271 TSPY4P0CV99 314 aa33.03■■■□□ 2.88
EPCAM-202ENST00000405271 TSPY10P0CW01 314 aa33.03■■■□□ 2.88
EPCAM-202ENST00000405271 RTEL1-TNFRSF6BF6WH68 1400 aa33.01■■■□□ 2.88
EPCAM-202ENST00000405271 ANKRD30AQ9BXX3 1397 aa33■■■□□ 2.87
EPCAM-202ENST00000405271 NCOA1Q15788 1441 aa32.98■■■□□ 2.87
EPCAM-202ENST00000405271 CHIC2Q9UKJ5 165 aa32.97■■■□□ 2.87
EPCAM-202ENST00000405271 NAIPQ13075 1403 aa32.96■■■□□ 2.87
EPCAM-202ENST00000405271 MLH3Q9UHC1 1453 aa32.95■■■□□ 2.86
EPCAM-202ENST00000405271 SETD5Q9C0A6 1442 aa32.94■■■□□ 2.86
EPCAM-202ENST00000405271 SPAG9O60271 1321 aaKnown RBP32.94■■■□□ 2.86
EPCAM-202ENST00000405271 MYT1LQ9UL68 1186 aa32.93■■■□□ 2.86
EPCAM-202ENST00000405271 ATP10AO60312 1499 aa32.92■■■□□ 2.86
EPCAM-202ENST00000405271 ABCA6Q8N139 1617 aa32.9■■■□□ 2.86
EPCAM-202ENST00000405271 DUOX2Q9NRD8 1548 aa32.9■■■□□ 2.86
EPCAM-202ENST00000405271 KIF15Q9NS87 1388 aa32.87■■■□□ 2.85
EPCAM-202ENST00000405271 RRP7BPQ9NSQ0 103 aa32.87■■■□□ 2.85
EPCAM-202ENST00000405271 ADAMTSL3P82987 1691 aa32.85■■■□□ 2.85
EPCAM-202ENST00000405271 RAB3GAP2Q9H2M9 1393 aa32.84■■■□□ 2.85
EPCAM-202ENST00000405271 DIP2CQ9Y2E4 1556 aa32.84■■■□□ 2.85
EPCAM-202ENST00000405271 EIF2AK4Q9P2K8 1649 aaKnown RBP32.84■■■□□ 2.85
EPCAM-202ENST00000405271 BCORL1Q5H9F3 1711 aa32.83■■■□□ 2.85
EPCAM-202ENST00000405271 SIGLEC1Q9BZZ2 1709 aa32.82■■■□□ 2.84
EPCAM-202ENST00000405271 MLECQ14165 292 aa32.81■■■□□ 2.84
EPCAM-202ENST00000405271 ANKRD50Q9ULJ7 1429 aa32.79■■■□□ 2.84
EPCAM-202ENST00000405271 ERBINQ96RT1 1412 aa32.79■■■□□ 2.84
EPCAM-202ENST00000405271 PTPRMP28827 1452 aa32.77■■■□□ 2.84
EPCAM-202ENST00000405271 HRCP23327 699 aa32.76■■■□□ 2.83
EPCAM-202ENST00000405271 UNC13BO14795 1591 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms