RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 CFDP1Q9UEE9 299 aaPredicted RBP16.64■□□□□ 0.25
PDE4D-206ENST00000405053 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
PDE4D-206ENST00000405053 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
PDE4D-206ENST00000405053 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
PDE4D-206ENST00000405053 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
PDE4D-206ENST00000405053 FANCAO15360 1455 aa16.61■□□□□ 0.25
PDE4D-206ENST00000405053 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
PDE4D-206ENST00000405053 NEO1Q92859 1461 aa16.61■□□□□ 0.25
PDE4D-206ENST00000405053 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
PDE4D-206ENST00000405053 TEX14Q8IWB6 1497 aa16.6■□□□□ 0.25
PDE4D-206ENST00000405053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDE4D-206ENST00000405053 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
PDE4D-206ENST00000405053 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
PDE4D-206ENST00000405053 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.24
PDE4D-206ENST00000405053 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
PDE4D-206ENST00000405053 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
PDE4D-206ENST00000405053 CAMSAP2Q08AD1 1489 aa16.56■□□□□ 0.24
PDE4D-206ENST00000405053 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
PDE4D-206ENST00000405053 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
PDE4D-206ENST00000405053 TSPOAP1O95153 1857 aa16.55■□□□□ 0.24
PDE4D-206ENST00000405053 ABCC1P33527 1531 aa16.55■□□□□ 0.24
PDE4D-206ENST00000405053 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
PDE4D-206ENST00000405053 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
PDE4D-206ENST00000405053 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
PDE4D-206ENST00000405053 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
PDE4D-206ENST00000405053 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
PDE4D-206ENST00000405053 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
PDE4D-206ENST00000405053 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
PDE4D-206ENST00000405053 RSPH4AQ5TD94 716 aa16.5■□□□□ 0.23
PDE4D-206ENST00000405053 SCAPERQ9BY12 1400 aa16.5■□□□□ 0.23
PDE4D-206ENST00000405053 HNRNPMP52272 730 aaKnown RBP eCLIP16.48■□□□□ 0.232e-6■■■□□ 14.7
PDE4D-206ENST00000405053 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
PDE4D-206ENST00000405053 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
PDE4D-206ENST00000405053 CCDC141Q6ZP82 1450 aa16.47■□□□□ 0.23
PDE4D-206ENST00000405053 ABCC5O15440 1437 aa16.46■□□□□ 0.23
PDE4D-206ENST00000405053 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
PDE4D-206ENST00000405053 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
PDE4D-206ENST00000405053 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
PDE4D-206ENST00000405053 DAPK1P53355 1430 aa16.45■□□□□ 0.22
PDE4D-206ENST00000405053 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
PDE4D-206ENST00000405053 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
PDE4D-206ENST00000405053 SHANK2Q9UPX8 1470 aa16.44■□□□□ 0.22
PDE4D-206ENST00000405053 KDM5CP41229 1560 aa16.43■□□□□ 0.22
PDE4D-206ENST00000405053 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
PDE4D-206ENST00000405053 AFAP1Q8N556 730 aa16.42■□□□□ 0.22
PDE4D-206ENST00000405053 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
PDE4D-206ENST00000405053 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
PDE4D-206ENST00000405053 FRMPD1Q5SYB0 1578 aa16.42■□□□□ 0.22
PDE4D-206ENST00000405053 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
PDE4D-206ENST00000405053 RTEL1-TNFRSF6BF6WH68 1400 aa16.4■□□□□ 0.22
PDE4D-206ENST00000405053 RAPGEF3O95398 923 aa16.4■□□□□ 0.22
PDE4D-206ENST00000405053 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
PDE4D-206ENST00000405053 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
PDE4D-206ENST00000405053 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
PDE4D-206ENST00000405053 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
PDE4D-206ENST00000405053 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
PDE4D-206ENST00000405053 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
PDE4D-206ENST00000405053 SPAG9O60271 1321 aaKnown RBP16.38■□□□□ 0.21
PDE4D-206ENST00000405053 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
PDE4D-206ENST00000405053 KDM6BO15054 1643 aa16.37■□□□□ 0.21
PDE4D-206ENST00000405053 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
PDE4D-206ENST00000405053 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
PDE4D-206ENST00000405053 MAGI2Q86UL8 1455 aa16.36■□□□□ 0.21
PDE4D-206ENST00000405053 ATP7AQ04656 1500 aa16.35■□□□□ 0.21
PDE4D-206ENST00000405053 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
PDE4D-206ENST00000405053 ITGAEP38570 1179 aa16.35■□□□□ 0.21
PDE4D-206ENST00000405053 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
PDE4D-206ENST00000405053 KIDINS220Q9ULH0 1771 aa16.34■□□□□ 0.21
PDE4D-206ENST00000405053 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
PDE4D-206ENST00000405053 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
PDE4D-206ENST00000405053 ANKRD30AQ9BXX3 1397 aa16.33■□□□□ 0.2
PDE4D-206ENST00000405053 ADGBQ8N7X0 1667 aa16.33■□□□□ 0.2
PDE4D-206ENST00000405053 HFM1A2PYH4 1435 aa16.3■□□□□ 0.2
PDE4D-206ENST00000405053 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
PDE4D-206ENST00000405053 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
PDE4D-206ENST00000405053 ABCA6Q8N139 1617 aa16.28■□□□□ 0.2
PDE4D-206ENST00000405053 DIP2CQ9Y2E4 1556 aa16.28■□□□□ 0.2
PDE4D-206ENST00000405053 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
PDE4D-206ENST00000405053 NAIPQ13075 1403 aa16.28■□□□□ 0.2
PDE4D-206ENST00000405053 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
PDE4D-206ENST00000405053 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
PDE4D-206ENST00000405053 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
PDE4D-206ENST00000405053 ATP10AO60312 1499 aa16.26■□□□□ 0.19
PDE4D-206ENST00000405053 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
PDE4D-206ENST00000405053 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
PDE4D-206ENST00000405053 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
PDE4D-206ENST00000405053 MYT1LQ9UL68 1186 aa16.25■□□□□ 0.19
PDE4D-206ENST00000405053 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
PDE4D-206ENST00000405053 A2MP01023 1474 aa16.23■□□□□ 0.19
PDE4D-206ENST00000405053 SETD5Q9C0A6 1442 aa16.23■□□□□ 0.19
PDE4D-206ENST00000405053 ANKRD50Q9ULJ7 1429 aa16.23■□□□□ 0.19
PDE4D-206ENST00000405053 HRCP23327 699 aa16.2■□□□□ 0.18
PDE4D-206ENST00000405053 AGLP35573 1532 aa16.19■□□□□ 0.18
PDE4D-206ENST00000405053 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
PDE4D-206ENST00000405053 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
PDE4D-206ENST00000405053 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
PDE4D-206ENST00000405053 ACIN1Q9UKV3 1341 aaKnown RBP16.17■□□□□ 0.18
PDE4D-206ENST00000405053 SIGLEC1Q9BZZ2 1709 aa16.15■□□□□ 0.18
PDE4D-206ENST00000405053 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
PDE4D-206ENST00000405053 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms