RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 EFCAB2Q5VUJ9 269 aa26.32■■□□□ 1.8
CGREF1-205ENST00000404694 ZMYM4Q5VZL5 1548 aa26.3■■□□□ 1.8
CGREF1-205ENST00000404694 CDC42BPAQ5VT25 1732 aa26.3■■□□□ 1.8
CGREF1-205ENST00000404694 SCAPERQ9BY12 1400 aa26.29■■□□□ 1.8
CGREF1-205ENST00000404694 ARHGEF40Q8TER5 1519 aa26.28■■□□□ 1.8
CGREF1-205ENST00000404694 POGZQ7Z3K3 1410 aa26.28■■□□□ 1.8
CGREF1-205ENST00000404694 MTUS2Q5JR59 1369 aa26.25■■□□□ 1.79
CGREF1-205ENST00000404694 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
CGREF1-205ENST00000404694 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
CGREF1-205ENST00000404694 ZFYVE16Q7Z3T8 1539 aa26.21■■□□□ 1.79
CGREF1-205ENST00000404694 MAGI2Q86UL8 1455 aa26.2■■□□□ 1.79
CGREF1-205ENST00000404694 ABCC1P33527 1531 aa26.2■■□□□ 1.78
CGREF1-205ENST00000404694 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
CGREF1-205ENST00000404694 ZNF518AQ6AHZ1 1483 aa26.19■■□□□ 1.78
CGREF1-205ENST00000404694 YEATS2Q9ULM3 1422 aa26.18■■□□□ 1.78
CGREF1-205ENST00000404694 TIAM1Q13009 1591 aa26.18■■□□□ 1.78
CGREF1-205ENST00000404694 KDM5CP41229 1560 aa26.18■■□□□ 1.78
CGREF1-205ENST00000404694 ITSN2Q9NZM3 1697 aa26.17■■□□□ 1.78
CGREF1-205ENST00000404694 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
CGREF1-205ENST00000404694 ARHGEF12Q9NZN5 1544 aa26.14■■□□□ 1.78
CGREF1-205ENST00000404694 CCNB3Q8WWL7 1395 aa26.13■■□□□ 1.77
CGREF1-205ENST00000404694 BCORL1Q5H9F3 1711 aa26.12■■□□□ 1.77
CGREF1-205ENST00000404694 SIGLEC1Q9BZZ2 1709 aa26.11■■□□□ 1.77
CGREF1-205ENST00000404694 ADAMTSL3P82987 1691 aa26.11■■□□□ 1.77
CGREF1-205ENST00000404694 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
CGREF1-205ENST00000404694 AFAP1Q8N556 730 aa26.1■■□□□ 1.77
CGREF1-205ENST00000404694 SUPT6HQ7KZ85 1726 aaKnown RBP26.1■■□□□ 1.77
CGREF1-205ENST00000404694 TRAPPC8Q9Y2L5 1435 aa26.09■■□□□ 1.77
CGREF1-205ENST00000404694 ARID4BQ4LE39 1312 aaPredicted RBP26.07■■□□□ 1.76
CGREF1-205ENST00000404694 SYCP2Q9BX26 1530 aa26.07■■□□□ 1.76
CGREF1-205ENST00000404694 ZNF777Q9ULD5 760 aaPredicted RBP26.07■■□□□ 1.76
CGREF1-205ENST00000404694 MAP3K1Q13233 1512 aa26.06■■□□□ 1.76
CGREF1-205ENST00000404694 CFDP1Q9UEE9 299 aaPredicted RBP26.06■■□□□ 1.76
CGREF1-205ENST00000404694 ATP10AO60312 1499 aa26.05■■□□□ 1.76
CGREF1-205ENST00000404694 NCOA2Q15596 1464 aa26.05■■□□□ 1.76
CGREF1-205ENST00000404694 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
CGREF1-205ENST00000404694 MLH3Q9UHC1 1453 aa26.04■■□□□ 1.76
CGREF1-205ENST00000404694 C9orf84Q5VXU9 1444 aa26.03■■□□□ 1.76
CGREF1-205ENST00000404694 DIP2CQ9Y2E4 1556 aa26.03■■□□□ 1.76
CGREF1-205ENST00000404694 MADDQ8WXG6 1647 aa26.03■■□□□ 1.76
CGREF1-205ENST00000404694 PLEKHH2Q8IVE3 1493 aa26.03■■□□□ 1.76
CGREF1-205ENST00000404694 ABCA6Q8N139 1617 aa26.02■■□□□ 1.76
CGREF1-205ENST00000404694 KIAA1107Q9UPP5 1409 aa26.01■■□□□ 1.75
CGREF1-205ENST00000404694 KIDINS220Q9ULH0 1771 aa26■■□□□ 1.75
CGREF1-205ENST00000404694 MYT1LQ9UL68 1186 aa25.97■■□□□ 1.75
CGREF1-205ENST00000404694 REREQ9P2R6 1566 aa25.97■■□□□ 1.75
CGREF1-205ENST00000404694 HNRNPMP52272 730 aaKnown RBP eCLIP25.96■■□□□ 1.75
CGREF1-205ENST00000404694 PTPRMP28827 1452 aa25.96■■□□□ 1.75
CGREF1-205ENST00000404694 RIMS1Q86UR5 1692 aaKnown RBP25.95■■□□□ 1.74
CGREF1-205ENST00000404694 KANK4Q5T7N3 995 aaPredicted RBP25.95■■□□□ 1.74
CGREF1-205ENST00000404694 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
CGREF1-205ENST00000404694 INO80Q9ULG1 1556 aaPredicted RBP25.92■■□□□ 1.74
CGREF1-205ENST00000404694 FER1L4A9Z1Z3 1794 aa25.9■■□□□ 1.74
CGREF1-205ENST00000404694 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
CGREF1-205ENST00000404694 CAMSAP2Q08AD1 1489 aa25.9■■□□□ 1.74
CGREF1-205ENST00000404694 MBD5Q9P267 1494 aa25.9■■□□□ 1.74
CGREF1-205ENST00000404694 SPAG9O60271 1321 aaKnown RBP25.89■■□□□ 1.74
CGREF1-205ENST00000404694 MLECQ14165 292 aa25.89■■□□□ 1.74
CGREF1-205ENST00000404694 AGLP35573 1532 aa25.86■■□□□ 1.73
CGREF1-205ENST00000404694 APLP2Q06481 763 aa25.85■■□□□ 1.73
CGREF1-205ENST00000404694 MYOM3Q5VTT5 1437 aa25.82■■□□□ 1.72
CGREF1-205ENST00000404694 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
CGREF1-205ENST00000404694 PLXNC1O60486 1568 aa25.79■■□□□ 1.72
CGREF1-205ENST00000404694 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
CGREF1-205ENST00000404694 RTEL1-TNFRSF6BF6WH68 1400 aa25.78■■□□□ 1.72
CGREF1-205ENST00000404694 MIA2Q96PC5 1412 aa25.78■■□□□ 1.72
CGREF1-205ENST00000404694 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
CGREF1-205ENST00000404694 A2MP01023 1474 aa25.76■■□□□ 1.71
CGREF1-205ENST00000404694 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
CGREF1-205ENST00000404694 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.71
CGREF1-205ENST00000404694 PTPN23Q9H3S7 1636 aa25.68■■□□□ 1.7
CGREF1-205ENST00000404694 LMTK3Q96Q04 1460 aa25.67■■□□□ 1.7
CGREF1-205ENST00000404694 MAST1Q9Y2H9 1570 aa25.66■■□□□ 1.7
CGREF1-205ENST00000404694 C3P01024 1663 aa25.66■■□□□ 1.7
CGREF1-205ENST00000404694 FGD6Q6ZV73 1430 aa25.64■■□□□ 1.7
CGREF1-205ENST00000404694 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.69
CGREF1-205ENST00000404694 DHX29Q7Z478 1369 aaKnown RBP25.63■■□□□ 1.69
CGREF1-205ENST00000404694 TSPY4P0CV99 314 aa25.63■■□□□ 1.69
CGREF1-205ENST00000404694 TSPY10P0CW01 314 aa25.63■■□□□ 1.69
CGREF1-205ENST00000404694 CEBPAP49715 358 aaPredicted RBP25.63■■□□□ 1.69
CGREF1-205ENST00000404694 MROH2AA6NES4 1674 aa25.62■■□□□ 1.69
CGREF1-205ENST00000404694 ESF1Q9H501 851 aaKnown RBP25.62■■□□□ 1.69
CGREF1-205ENST00000404694 TCOF1Q13428 1488 aaKnown RBP25.61■■□□□ 1.69
CGREF1-205ENST00000404694 CROCC2H7BZ55 1655 aa25.61■■□□□ 1.69
CGREF1-205ENST00000404694 PREX1Q8TCU6 1659 aa25.59■■□□□ 1.69
CGREF1-205ENST00000404694 CLTCQ00610 1675 aaKnown RBP25.59■■□□□ 1.69
CGREF1-205ENST00000404694 DNMT1P26358 1616 aaKnown RBP25.57■■□□□ 1.68
CGREF1-205ENST00000404694 GGT6Q6P531 493 aa25.56■■□□□ 1.68
CGREF1-205ENST00000404694 SHANK2Q9UPX8 1470 aa25.55■■□□□ 1.68
CGREF1-205ENST00000404694 ABCC5O15440 1437 aa25.55■■□□□ 1.68
CGREF1-205ENST00000404694 DAPK1P53355 1430 aa25.53■■□□□ 1.68
CGREF1-205ENST00000404694 SETD1BQ9UPS6 1966 aaKnown RBP25.53■■□□□ 1.68
CGREF1-205ENST00000404694 KIF3BO15066 747 aa25.51■■□□□ 1.67
CGREF1-205ENST00000404694 ZMYM3Q14202 1370 aa25.5■■□□□ 1.67
CGREF1-205ENST00000404694 PPP6R1Q9UPN7 881 aa25.5■■□□□ 1.67
CGREF1-205ENST00000404694 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
CGREF1-205ENST00000404694 UHRF1BP1Q6BDS2 1440 aa25.49■■□□□ 1.67
CGREF1-205ENST00000404694 HSPA2P54652 639 aa25.48■■□□□ 1.67
CGREF1-205ENST00000404694 FAM135AQ9P2D6 1515 aa25.48■■□□□ 1.67
CGREF1-205ENST00000404694 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms