RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 ARHGAP5Q13017 1502 aa24.99■■□□□ 1.59
ATG4B-202ENST00000400771 ITSN2Q9NZM3 1697 aa24.99■■□□□ 1.59
ATG4B-202ENST00000400771 POGZQ7Z3K3 1410 aa24.98■■□□□ 1.59
ATG4B-202ENST00000400771 RAPGEF3O95398 923 aa24.98■■□□□ 1.59
ATG4B-202ENST00000400771 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
ATG4B-202ENST00000400771 ABCC1P33527 1531 aa24.96■■□□□ 1.59
ATG4B-202ENST00000400771 KDM5CP41229 1560 aa24.95■■□□□ 1.58
ATG4B-202ENST00000400771 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
ATG4B-202ENST00000400771 BCORL1Q5H9F3 1711 aa24.92■■□□□ 1.58
ATG4B-202ENST00000400771 ZFYVE16Q7Z3T8 1539 aa24.92■■□□□ 1.58
ATG4B-202ENST00000400771 ADAMTSL3P82987 1691 aa24.92■■□□□ 1.58
ATG4B-202ENST00000400771 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
ATG4B-202ENST00000400771 TIAM1Q13009 1591 aa24.92■■□□□ 1.58
ATG4B-202ENST00000400771 SAMD9LQ8IVG5 1584 aa24.91■■□□□ 1.58
ATG4B-202ENST00000400771 VPS8Q8N3P4 1428 aa24.9■■□□□ 1.58
ATG4B-202ENST00000400771 SCAPERQ9BY12 1400 aa24.9■■□□□ 1.58
ATG4B-202ENST00000400771 YEATS2Q9ULM3 1422 aa24.87■■□□□ 1.57
ATG4B-202ENST00000400771 ARHGEF12Q9NZN5 1544 aa24.87■■□□□ 1.57
ATG4B-202ENST00000400771 HECW2Q9P2P5 1572 aa24.87■■□□□ 1.57
ATG4B-202ENST00000400771 MAGI2Q86UL8 1455 aa24.86■■□□□ 1.57
ATG4B-202ENST00000400771 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
ATG4B-202ENST00000400771 ZNF518AQ6AHZ1 1483 aa24.85■■□□□ 1.57
ATG4B-202ENST00000400771 SUPT6HQ7KZ85 1726 aaKnown RBP24.83■■□□□ 1.57
ATG4B-202ENST00000400771 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
ATG4B-202ENST00000400771 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
ATG4B-202ENST00000400771 MADDQ8WXG6 1647 aa24.83■■□□□ 1.56
ATG4B-202ENST00000400771 DIP2CQ9Y2E4 1556 aa24.82■■□□□ 1.56
ATG4B-202ENST00000400771 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
ATG4B-202ENST00000400771 MTUS2Q5JR59 1369 aa24.8■■□□□ 1.56
ATG4B-202ENST00000400771 KIDINS220Q9ULH0 1771 aa24.8■■□□□ 1.56
ATG4B-202ENST00000400771 TRAPPC8Q9Y2L5 1435 aa24.77■■□□□ 1.56
ATG4B-202ENST00000400771 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
ATG4B-202ENST00000400771 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
ATG4B-202ENST00000400771 RIMS1Q86UR5 1692 aaKnown RBP24.75■■□□□ 1.55
ATG4B-202ENST00000400771 INO80Q9ULG1 1556 aaPredicted RBP24.74■■□□□ 1.55
ATG4B-202ENST00000400771 FER1L4A9Z1Z3 1794 aa24.73■■□□□ 1.55
ATG4B-202ENST00000400771 NCOA2Q15596 1464 aa24.73■■□□□ 1.55
ATG4B-202ENST00000400771 MLH3Q9UHC1 1453 aa24.73■■□□□ 1.55
ATG4B-202ENST00000400771 LRRC9Q6ZRR7 1453 aa24.71■■□□□ 1.55
ATG4B-202ENST00000400771 C9orf84Q5VXU9 1444 aa24.71■■□□□ 1.55
ATG4B-202ENST00000400771 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.55
ATG4B-202ENST00000400771 ATP10AO60312 1499 aa24.7■■□□□ 1.54
ATG4B-202ENST00000400771 AFAP1Q8N556 730 aa24.67■■□□□ 1.54
ATG4B-202ENST00000400771 PTPRMP28827 1452 aa24.66■■□□□ 1.54
ATG4B-202ENST00000400771 PLEKHH2Q8IVE3 1493 aa24.66■■□□□ 1.54
ATG4B-202ENST00000400771 KIAA1107Q9UPP5 1409 aa24.66■■□□□ 1.54
ATG4B-202ENST00000400771 ATP7AQ04656 1500 aa24.64■■□□□ 1.53
ATG4B-202ENST00000400771 MBD5Q9P267 1494 aa24.62■■□□□ 1.53
ATG4B-202ENST00000400771 CAMSAP2Q08AD1 1489 aa24.61■■□□□ 1.53
ATG4B-202ENST00000400771 PLXNC1O60486 1568 aa24.61■■□□□ 1.53
ATG4B-202ENST00000400771 AGLP35573 1532 aa24.61■■□□□ 1.53
ATG4B-202ENST00000400771 ADGBQ8N7X0 1667 aa24.6■■□□□ 1.53
ATG4B-202ENST00000400771 CFDP1Q9UEE9 299 aaPredicted RBP24.59■■□□□ 1.53
ATG4B-202ENST00000400771 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
ATG4B-202ENST00000400771 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
ATG4B-202ENST00000400771 ARHGEF5Q12774 1597 aa24.55■■□□□ 1.52
ATG4B-202ENST00000400771 ZNF644Q9H582 1327 aaPredicted RBP24.55■■□□□ 1.52
ATG4B-202ENST00000400771 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
ATG4B-202ENST00000400771 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■■□ 21.8
ATG4B-202ENST00000400771 CCDC141Q6ZP82 1450 aa24.51■■□□□ 1.51
ATG4B-202ENST00000400771 MYOM3Q5VTT5 1437 aa24.49■■□□□ 1.51
ATG4B-202ENST00000400771 CROCC2H7BZ55 1655 aa24.49■■□□□ 1.51
ATG4B-202ENST00000400771 C3P01024 1663 aa24.48■■□□□ 1.51
ATG4B-202ENST00000400771 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
ATG4B-202ENST00000400771 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
ATG4B-202ENST00000400771 MROH2AA6NES4 1674 aa24.45■■□□□ 1.5
ATG4B-202ENST00000400771 A2MP01023 1474 aa24.44■■□□□ 1.5
ATG4B-202ENST00000400771 LMTK3Q96Q04 1460 aa24.44■■□□□ 1.5
ATG4B-202ENST00000400771 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
ATG4B-202ENST00000400771 MIA2Q96PC5 1412 aa24.43■■□□□ 1.5
ATG4B-202ENST00000400771 PTPN23Q9H3S7 1636 aa24.43■■□□□ 1.5
ATG4B-202ENST00000400771 MLECQ14165 292 aa24.42■■□□□ 1.5
ATG4B-202ENST00000400771 PREX1Q8TCU6 1659 aa24.42■■□□□ 1.5
ATG4B-202ENST00000400771 MYT1LQ9UL68 1186 aa24.4■■□□□ 1.5
ATG4B-202ENST00000400771 CLTCQ00610 1675 aaKnown RBP24.39■■□□□ 1.49
ATG4B-202ENST00000400771 DNMT1P26358 1616 aaKnown RBP24.35■■□□□ 1.49
ATG4B-202ENST00000400771 TCOF1Q13428 1488 aaKnown RBP24.35■■□□□ 1.49
ATG4B-202ENST00000400771 FGD6Q6ZV73 1430 aa24.33■■□□□ 1.49
ATG4B-202ENST00000400771 RNF17Q9BXT8 1623 aaKnown RBP24.31■■□□□ 1.48
ATG4B-202ENST00000400771 EIF2AK4Q9P2K8 1649 aaKnown RBP24.3■■□□□ 1.48
ATG4B-202ENST00000400771 SETD1BQ9UPS6 1966 aaKnown RBP24.3■■□□□ 1.48
ATG4B-202ENST00000400771 SHANK2Q9UPX8 1470 aa24.3■■□□□ 1.48
ATG4B-202ENST00000400771 CNTLNQ9NXG0 1405 aa24.29■■□□□ 1.48
ATG4B-202ENST00000400771 MROH1Q8NDA8 1641 aa24.27■■□□□ 1.48
ATG4B-202ENST00000400771 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
ATG4B-202ENST00000400771 APLP2Q06481 763 aa24.26■■□□□ 1.47
ATG4B-202ENST00000400771 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
ATG4B-202ENST00000400771 RSPH4AQ5TD94 716 aa24.25■■□□□ 1.47
ATG4B-202ENST00000400771 ABCC5O15440 1437 aa24.24■■□□□ 1.47
ATG4B-202ENST00000400771 CEBPAP49715 358 aaPredicted RBP24.23■■□□□ 1.47
ATG4B-202ENST00000400771 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
ATG4B-202ENST00000400771 MYO3AQ8NEV4 1616 aa24.22■■□□□ 1.47
ATG4B-202ENST00000400771 DAPK1P53355 1430 aa24.22■■□□□ 1.47
ATG4B-202ENST00000400771 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
ATG4B-202ENST00000400771 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
ATG4B-202ENST00000400771 ZC3H13Q5T200 1668 aaKnown RBP24.21■■□□□ 1.47
ATG4B-202ENST00000400771 STRCQ7RTU9 1775 aa24.19■■□□□ 1.46
ATG4B-202ENST00000400771 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
ATG4B-202ENST00000400771 CEP152O94986 1710 aa24.18■■□□□ 1.46
ATG4B-202ENST00000400771 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms