RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GNL2Q13823 731 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-216ENST00000399638 WWC1Q8IX03 1113 aa14.12□□□□□ -0.15
CACNA1C-216ENST00000399638 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CACNA1C-216ENST00000399638 FRAT2O75474 233 aaPredicted RBP14.11□□□□□ -0.15
CACNA1C-216ENST00000399638 FOXD1Q16676 465 aa14.11□□□□□ -0.15
CACNA1C-216ENST00000399638 PPP1R1BQ9UD71 204 aaPredicted RBP14.1□□□□□ -0.15
CACNA1C-216ENST00000399638 SF3B2Q13435 895 aaKnown RBP14.09□□□□□ -0.15
CACNA1C-216ENST00000399638 CTDP1Q9Y5B0 961 aaPredicted RBP14.08□□□□□ -0.15
CACNA1C-216ENST00000399638 FBXW7Q969H0 707 aa14.07□□□□□ -0.16
CACNA1C-216ENST00000399638 GORABQ5T7V8 394 aa14.07□□□□□ -0.16
CACNA1C-216ENST00000399638 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
CACNA1C-216ENST00000399638 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
CACNA1C-216ENST00000399638 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
CACNA1C-216ENST00000399638 CLIP1P30622 1438 aa14.06□□□□□ -0.16
CACNA1C-216ENST00000399638 GOLGA6L22H0YM25 854 aa14.05□□□□□ -0.16
CACNA1C-216ENST00000399638 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
CACNA1C-216ENST00000399638 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
CACNA1C-216ENST00000399638 TRIM34Q9BYJ4 488 aa14.04□□□□□ -0.16
CACNA1C-216ENST00000399638 EIF4G1Q04637 1599 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-216ENST00000399638 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
CACNA1C-216ENST00000399638 RAD21O60216 631 aa14.02□□□□□ -0.16
CACNA1C-216ENST00000399638 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.17
CACNA1C-216ENST00000399638 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-216ENST00000399638 GOLGA6L6A8MZA4 724 aa14.01□□□□□ -0.17
CACNA1C-216ENST00000399638 NGDNQ8NEJ9 315 aaKnown RBP14□□□□□ -0.17
CACNA1C-216ENST00000399638 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
CACNA1C-216ENST00000399638 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
CACNA1C-216ENST00000399638 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-216ENST00000399638 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
CACNA1C-216ENST00000399638 KIAA2012Q0VF49 1180 aa13.99□□□□□ -0.17
CACNA1C-216ENST00000399638 BECN1Q14457 450 aa13.99□□□□□ -0.17
CACNA1C-216ENST00000399638 CC2D1BQ5T0F9 858 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-216ENST00000399638 CALRP27797 417 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-216ENST00000399638 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
CACNA1C-216ENST00000399638 TCEAL9Q9UHQ7 104 aa13.98□□□□□ -0.17
CACNA1C-216ENST00000399638 MARCH6O60337 910 aa13.97□□□□□ -0.17
CACNA1C-216ENST00000399638 CYB5RLQ6IPT4 315 aa13.97□□□□□ -0.17
CACNA1C-216ENST00000399638 GOLGA6L4A6NEF3 574 aa13.96□□□□□ -0.17
CACNA1C-216ENST00000399638 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-216ENST00000399638 APBB1O00213 710 aa13.94□□□□□ -0.18
CACNA1C-216ENST00000399638 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
CACNA1C-216ENST00000399638 NACADO15069 1562 aa13.94□□□□□ -0.18
CACNA1C-216ENST00000399638 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
CACNA1C-216ENST00000399638 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-216ENST00000399638 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-216ENST00000399638 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
CACNA1C-216ENST00000399638 CHMP4BQ9H444 224 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-216ENST00000399638 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
CACNA1C-216ENST00000399638 CHAF1AQ13111 956 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-216ENST00000399638 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
CACNA1C-216ENST00000399638 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-216ENST00000399638 CREBRFQ8IUR6 639 aa13.9□□□□□ -0.18
CACNA1C-216ENST00000399638 AMPHP49418 695 aa13.89□□□□□ -0.19
CACNA1C-216ENST00000399638 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-216ENST00000399638 VPS8Q8N3P4 1428 aa13.88□□□□□ -0.19
CACNA1C-216ENST00000399638 CCAR1Q8IX12 1150 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-216ENST00000399638 NRDCO43847 1150 aa13.87□□□□□ -0.19
CACNA1C-216ENST00000399638 HSP90AB1P08238 724 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-216ENST00000399638 MCCP23508 829 aa13.87□□□□□ -0.19
CACNA1C-216ENST00000399638 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
CACNA1C-216ENST00000399638 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
CACNA1C-216ENST00000399638 APPP05067 770 aa13.85□□□□□ -0.19
CACNA1C-216ENST00000399638 PIP4K2BP78356 416 aa13.85□□□□□ -0.19
CACNA1C-216ENST00000399638 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
CACNA1C-216ENST00000399638 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-216ENST00000399638 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-216ENST00000399638 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
CACNA1C-216ENST00000399638 HSP90B1P14625 803 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-216ENST00000399638 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.19
CACNA1C-216ENST00000399638 TMF1P82094 1093 aa13.83□□□□□ -0.2
CACNA1C-216ENST00000399638 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
CACNA1C-216ENST00000399638 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-216ENST00000399638 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-216ENST00000399638 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-216ENST00000399638 MS4A1P11836 297 aa13.82□□□□□ -0.2
CACNA1C-216ENST00000399638 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
CACNA1C-216ENST00000399638 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
CACNA1C-216ENST00000399638 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
CACNA1C-216ENST00000399638 ATF3P18847 181 aa13.8□□□□□ -0.2
CACNA1C-216ENST00000399638 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
CACNA1C-216ENST00000399638 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-216ENST00000399638 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-216ENST00000399638 RBM19Q9Y4C8 960 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-216ENST00000399638 C1orf141Q5JVX7 400 aa13.79□□□□□ -0.2
CACNA1C-216ENST00000399638 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
CACNA1C-216ENST00000399638 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
CACNA1C-216ENST00000399638 RGS3P49796 1198 aa13.79□□□□□ -0.2
CACNA1C-216ENST00000399638 GPATCH3Q96I76 525 aa13.79□□□□□ -0.2
CACNA1C-216ENST00000399638 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-216ENST00000399638 VPS37DQ86XT2 251 aa13.78□□□□□ -0.2
CACNA1C-216ENST00000399638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
CACNA1C-216ENST00000399638 PTMSP20962 102 aa13.76□□□□□ -0.21
CACNA1C-216ENST00000399638 KIF3BO15066 747 aa13.76□□□□□ -0.21
CACNA1C-216ENST00000399638 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-216ENST00000399638 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
CACNA1C-216ENST00000399638 PSME1Q06323 249 aa13.74□□□□□ -0.21
CACNA1C-216ENST00000399638 TTC5Q8N0Z6 440 aa13.74□□□□□ -0.21
CACNA1C-216ENST00000399638 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
CACNA1C-216ENST00000399638 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-216ENST00000399638 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms