RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
CACNA1C-206ENST00000399595 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
CACNA1C-206ENST00000399595 GGT6Q6P531 493 aa14.26□□□□□ -0.13
CACNA1C-206ENST00000399595 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-206ENST00000399595 RGS3P49796 1198 aa14.25□□□□□ -0.13
CACNA1C-206ENST00000399595 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
CACNA1C-206ENST00000399595 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
CACNA1C-206ENST00000399595 KANK1Q14678 1352 aa14.25□□□□□ -0.13
CACNA1C-206ENST00000399595 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-206ENST00000399595 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CACNA1C-206ENST00000399595 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
CACNA1C-206ENST00000399595 VPS53Q5VIR6 699 aa14.23□□□□□ -0.13
CACNA1C-206ENST00000399595 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
CACNA1C-206ENST00000399595 NUDCQ9Y266 331 aa14.22□□□□□ -0.13
CACNA1C-206ENST00000399595 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
CACNA1C-206ENST00000399595 SAFB2Q14151 953 aaKnown RBP eCLIP14.2□□□□□ -0.14
CACNA1C-206ENST00000399595 SRPK2P78362 688 aaKnown RBP14.2□□□□□ -0.14
CACNA1C-206ENST00000399595 GTF2E1P29083 439 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-206ENST00000399595 GZF1Q9H116 711 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-206ENST00000399595 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
CACNA1C-206ENST00000399595 ZNF771Q7L3S4 317 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-206ENST00000399595 SF3B2Q13435 895 aaKnown RBP14.18□□□□□ -0.14
CACNA1C-206ENST00000399595 EVA1CP58658 441 aa14.18□□□□□ -0.14
CACNA1C-206ENST00000399595 CWC22Q9HCG8 908 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-206ENST00000399595 STK26Q9P289 416 aa14.17□□□□□ -0.14
CACNA1C-206ENST00000399595 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
CACNA1C-206ENST00000399595 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
CACNA1C-206ENST00000399595 CEP89Q96ST8 783 aa14.16□□□□□ -0.14
CACNA1C-206ENST00000399595 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-206ENST00000399595 APBB1O00213 710 aa14.15□□□□□ -0.14
CACNA1C-206ENST00000399595 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
CACNA1C-206ENST00000399595 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.15
CACNA1C-206ENST00000399595 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-206ENST00000399595 USP35Q9P2H5 1018 aa14.13□□□□□ -0.15
CACNA1C-206ENST00000399595 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
CACNA1C-206ENST00000399595 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
CACNA1C-206ENST00000399595 PES1O00541 588 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-206ENST00000399595 RRP12Q5JTH9 1297 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-206ENST00000399595 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
CACNA1C-206ENST00000399595 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-206ENST00000399595 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
CACNA1C-206ENST00000399595 CCAR2Q8N163 923 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-206ENST00000399595 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
CACNA1C-206ENST00000399595 PLCD4Q9BRC7 762 aa14.1□□□□□ -0.15
CACNA1C-206ENST00000399595 B4GALNT3Q6L9W6 998 aa14.09□□□□□ -0.15
CACNA1C-206ENST00000399595 GBP4Q96PP9 640 aa14.09□□□□□ -0.15
CACNA1C-206ENST00000399595 TPM4P67936 248 aa14.09□□□□□ -0.15
CACNA1C-206ENST00000399595 PPP1R1BQ9UD71 204 aaPredicted RBP14.08□□□□□ -0.15
CACNA1C-206ENST00000399595 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.16
CACNA1C-206ENST00000399595 MCCP23508 829 aa14.08□□□□□ -0.16
CACNA1C-206ENST00000399595 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■■■■ 115.4
CACNA1C-206ENST00000399595 FRAT2O75474 233 aaPredicted RBP14.08□□□□□ -0.16
CACNA1C-206ENST00000399595 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
CACNA1C-206ENST00000399595 AK7Q96M32 723 aa14.07□□□□□ -0.16
CACNA1C-206ENST00000399595 CHMP3Q9Y3E7 222 aa14.06□□□□□ -0.16
CACNA1C-206ENST00000399595 TIMELESSQ9UNS1 1208 aa14.05□□□□□ -0.16
CACNA1C-206ENST00000399595 CTDP1Q9Y5B0 961 aaPredicted RBP14.05□□□□□ -0.16
CACNA1C-206ENST00000399595 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
CACNA1C-206ENST00000399595 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
CACNA1C-206ENST00000399595 SYAP1Q96A49 352 aaPredicted RBP14.04□□□□□ -0.16
CACNA1C-206ENST00000399595 HDGFL2Q7Z4V5 671 aaPredicted RBP14.04□□□□□ -0.16
CACNA1C-206ENST00000399595 PODXL2Q9NZ53 605 aa14.04□□□□□ -0.16
CACNA1C-206ENST00000399595 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-206ENST00000399595 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
CACNA1C-206ENST00000399595 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.16
CACNA1C-206ENST00000399595 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.16
CACNA1C-206ENST00000399595 FOXD4L5Q5VV16 416 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-206ENST00000399595 FOXD4L4Q8WXT5 416 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-206ENST00000399595 RAD21O60216 631 aa14.01□□□□□ -0.17
CACNA1C-206ENST00000399595 MARCH6O60337 910 aa14.01□□□□□ -0.17
CACNA1C-206ENST00000399595 TRIM34Q9BYJ4 488 aa14□□□□□ -0.17
CACNA1C-206ENST00000399595 FBXW7Q969H0 707 aa14□□□□□ -0.17
CACNA1C-206ENST00000399595 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
CACNA1C-206ENST00000399595 SLKQ9H2G2 1235 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-206ENST00000399595 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
CACNA1C-206ENST00000399595 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-206ENST00000399595 PKNOX2Q96KN3 472 aa13.98□□□□□ -0.17
CACNA1C-206ENST00000399595 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-206ENST00000399595 TPM3P06753 285 aa13.98□□□□□ -0.17
CACNA1C-206ENST00000399595 CLIP1P30622 1438 aa13.97□□□□□ -0.17
CACNA1C-206ENST00000399595 GPS2Q13227 327 aa13.97□□□□□ -0.17
CACNA1C-206ENST00000399595 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
CACNA1C-206ENST00000399595 CHMP4BQ9H444 224 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-206ENST00000399595 LTV1Q96GA3 475 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-206ENST00000399595 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-206ENST00000399595 TEX35Q5T0J7 233 aa13.96□□□□□ -0.17
CACNA1C-206ENST00000399595 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.17
CACNA1C-206ENST00000399595 HTATSF1O43719 755 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-206ENST00000399595 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
CACNA1C-206ENST00000399595 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-206ENST00000399595 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
CACNA1C-206ENST00000399595 MS4A1P11836 297 aa13.92□□□□□ -0.18
CACNA1C-206ENST00000399595 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
CACNA1C-206ENST00000399595 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
CACNA1C-206ENST00000399595 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-206ENST00000399595 TCEAL9Q9UHQ7 104 aa13.92□□□□□ -0.18
CACNA1C-206ENST00000399595 CARMIL2Q6F5E8 1435 aa13.92□□□□□ -0.18
CACNA1C-206ENST00000399595 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-206ENST00000399595 AMPHP49418 695 aa13.91□□□□□ -0.18
CACNA1C-206ENST00000399595 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms