RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ITGAEP38570 1179 aa41.59■■■■■ 4.25
CPNE1-203ENST00000397442 CAMSAP2Q08AD1 1489 aa41.59■■■■■ 4.25
CPNE1-203ENST00000397442 PLCH2O75038 1416 aa41.57■■■■■ 4.24
CPNE1-203ENST00000397442 ARHGAP5Q13017 1502 aa41.51■■■■■ 4.24
CPNE1-203ENST00000397442 PTPRKQ15262 1439 aa41.51■■■■■ 4.24
CPNE1-203ENST00000397442 DNAJC5Q9H3Z4 198 aa41.51■■■■■ 4.24
CPNE1-203ENST00000397442 ZNF777Q9ULD5 760 aaPredicted RBP41.51■■■■■ 4.24
CPNE1-203ENST00000397442 ARAP3Q8WWN8 1544 aa41.49■■■■■ 4.23
CPNE1-203ENST00000397442 SAMD9LQ8IVG5 1584 aa41.49■■■■■ 4.23
CPNE1-203ENST00000397442 DNMT1P26358 1616 aaKnown RBP41.46■■■■■ 4.23
CPNE1-203ENST00000397442 DAPK1P53355 1430 aa41.41■■■■■ 4.22
CPNE1-203ENST00000397442 ABCC5O15440 1437 aa41.4■■■■■ 4.22
CPNE1-203ENST00000397442 GLI2P10070 1586 aa41.37■■■■■ 4.21
CPNE1-203ENST00000397442 EFCAB2Q5VUJ9 269 aa41.36■■■■■ 4.21
CPNE1-203ENST00000397442 MBD5Q9P267 1494 aa41.35■■■■■ 4.21
CPNE1-203ENST00000397442 DIP2BQ9P265 1576 aa41.34■■■■■ 4.21
CPNE1-203ENST00000397442 CD109Q6YHK3 1445 aa41.33■■■■■ 4.21
CPNE1-203ENST00000397442 ARHGEF5Q12774 1597 aa41.32■■■■■ 4.21
CPNE1-203ENST00000397442 CROCC2H7BZ55 1655 aa41.31■■■■■ 4.2
CPNE1-203ENST00000397442 PLEKHH2Q8IVE3 1493 aa41.3■■■■■ 4.2
CPNE1-203ENST00000397442 KIAA1107Q9UPP5 1409 aa41.3■■■■■ 4.2
CPNE1-203ENST00000397442 SYCP2Q9BX26 1530 aa41.3■■■■■ 4.2
CPNE1-203ENST00000397442 FANCAO15360 1455 aa41.29■■■■■ 4.2
CPNE1-203ENST00000397442 MAP3K4Q9Y6R4 1608 aa41.29■■■■■ 4.2
CPNE1-203ENST00000397442 HNRNPMP52272 730 aaKnown RBP eCLIP41.28■■■■■ 4.21e-7■■■■□ 25.4
CPNE1-203ENST00000397442 ABCC1P33527 1531 aa41.27■■■■■ 4.2
CPNE1-203ENST00000397442 ARHGEF12Q9NZN5 1544 aa41.25■■■■■ 4.19
CPNE1-203ENST00000397442 CHIC2Q9UKJ5 165 aa41.23■■■■■ 4.19
CPNE1-203ENST00000397442 AKNAQ7Z591 1439 aa41.23■■■■■ 4.19
CPNE1-203ENST00000397442 HFM1A2PYH4 1435 aa41.21■■■■■ 4.19
CPNE1-203ENST00000397442 SETD5Q9C0A6 1442 aa41.2■■■■■ 4.19
CPNE1-203ENST00000397442 CCDC141Q6ZP82 1450 aa41.2■■■■■ 4.19
CPNE1-203ENST00000397442 SHANK2Q9UPX8 1470 aa41.2■■■■■ 4.19
CPNE1-203ENST00000397442 FAM69CQ0P6D2 419 aa41.2■■■■■ 4.19
CPNE1-203ENST00000397442 ROCK1Q13464 1354 aa41.18■■■■■ 4.18
CPNE1-203ENST00000397442 RSPH4AQ5TD94 716 aa41.17■■■■■ 4.18
CPNE1-203ENST00000397442 NAIPQ13075 1403 aa41.16■■■■■ 4.18
CPNE1-203ENST00000397442 KIF13AQ9H1H9 1805 aa41.14■■■■■ 4.18
CPNE1-203ENST00000397442 CFAP74Q9C0B2 1584 aa41.14■■■■■ 4.18
CPNE1-203ENST00000397442 RAB3GAP2Q9H2M9 1393 aa41.14■■■■■ 4.18
CPNE1-203ENST00000397442 ADGBQ8N7X0 1667 aa41.14■■■■■ 4.18
CPNE1-203ENST00000397442 ADGRL2O95490 1459 aa41.13■■■■■ 4.17
CPNE1-203ENST00000397442 C9orf84Q5VXU9 1444 aa41.12■■■■■ 4.17
CPNE1-203ENST00000397442 GCC2Q8IWJ2 1684 aa41.11■■■■■ 4.17
CPNE1-203ENST00000397442 RRP7BPQ9NSQ0 103 aa41.1■■■■■ 4.17
CPNE1-203ENST00000397442 ADGRL1O94910 1474 aa41.1■■■■■ 4.17
CPNE1-203ENST00000397442 TRAPPC8Q9Y2L5 1435 aa41.1■■■■■ 4.17
CPNE1-203ENST00000397442 NCOA1Q15788 1441 aa41.08■■■■■ 4.17
CPNE1-203ENST00000397442 TSPY4P0CV99 314 aa41.07■■■■■ 4.16
CPNE1-203ENST00000397442 TSPY10P0CW01 314 aa41.07■■■■■ 4.16
CPNE1-203ENST00000397442 NEO1Q92859 1461 aa41.06■■■■■ 4.16
CPNE1-203ENST00000397442 MAST1Q9Y2H9 1570 aa41.06■■■■■ 4.16
CPNE1-203ENST00000397442 SCAPERQ9BY12 1400 aa41.05■■■■■ 4.16
CPNE1-203ENST00000397442 PPRC1Q5VV67 1664 aaKnown RBP41.03■■■■■ 4.16
CPNE1-203ENST00000397442 ANKRD30AQ9BXX3 1397 aa41.01■■■■■ 4.16
CPNE1-203ENST00000397442 HRCP23327 699 aa41.01■■■■■ 4.15
CPNE1-203ENST00000397442 TSPOAP1O95153 1857 aa40.97■■■■■ 4.15
CPNE1-203ENST00000397442 KDM6BO15054 1643 aa40.96■■■■■ 4.15
CPNE1-203ENST00000397442 AFAP1Q8N556 730 aa40.95■■■■■ 4.15
CPNE1-203ENST00000397442 PLXNC1O60486 1568 aa40.9■■■■■ 4.14
CPNE1-203ENST00000397442 POGZQ7Z3K3 1410 aa40.88■■■■■ 4.13
CPNE1-203ENST00000397442 ZNF518AQ6AHZ1 1483 aa40.87■■■■■ 4.13
CPNE1-203ENST00000397442 TEX14Q8IWB6 1497 aa40.87■■■■■ 4.13
CPNE1-203ENST00000397442 CCER1Q8TC90 406 aaPredicted RBP40.87■■■■■ 4.13
CPNE1-203ENST00000397442 ZFYVE16Q7Z3T8 1539 aa40.86■■■■■ 4.13
CPNE1-203ENST00000397442 RTEL1-TNFRSF6BF6WH68 1400 aa40.86■■■■■ 4.13
CPNE1-203ENST00000397442 KIF15Q9NS87 1388 aa40.85■■■■■ 4.13
CPNE1-203ENST00000397442 INO80Q9ULG1 1556 aaPredicted RBP40.85■■■■■ 4.13
CPNE1-203ENST00000397442 DHX57Q6P158 1386 aaKnown RBP40.85■■■■■ 4.13
CPNE1-203ENST00000397442 SPAG9O60271 1321 aaKnown RBP40.84■■■■■ 4.13
CPNE1-203ENST00000397442 KDM5CP41229 1560 aa40.83■■■■■ 4.13
CPNE1-203ENST00000397442 DENND4BO75064 1496 aaPredicted RBP40.81■■■■■ 4.12
CPNE1-203ENST00000397442 ANKRD50Q9ULJ7 1429 aa40.8■■■■■ 4.12
CPNE1-203ENST00000397442 ATP7AQ04656 1500 aa40.79■■■■■ 4.12
CPNE1-203ENST00000397442 RICTORQ6R327 1708 aa40.77■■■■■ 4.12
CPNE1-203ENST00000397442 KIDINS220Q9ULH0 1771 aa40.73■■■■■ 4.11
CPNE1-203ENST00000397442 RAPGEF3O95398 923 aa40.72■■■■■ 4.11
CPNE1-203ENST00000397442 DUOX2Q9NRD8 1548 aa40.7■■■■■ 4.11
CPNE1-203ENST00000397442 FRMPD1Q5SYB0 1578 aa40.7■■■■■ 4.11
CPNE1-203ENST00000397442 MLH3Q9UHC1 1453 aa40.7■■■■■ 4.11
CPNE1-203ENST00000397442 HECW2Q9P2P5 1572 aa40.68■■■■■ 4.1
CPNE1-203ENST00000397442 ACIN1Q9UKV3 1341 aaKnown RBP40.64■■■■■ 4.1
CPNE1-203ENST00000397442 ERBINQ96RT1 1412 aa40.61■■■■■ 4.09
CPNE1-203ENST00000397442 TRHP20396 242 aaPredicted RBP40.6■■■■■ 4.09
CPNE1-203ENST00000397442 TRIM52Q96A61 297 aa40.58■■■■■ 4.09
CPNE1-203ENST00000397442 COL17A1Q9UMD9 1497 aaPredicted RBP40.58■■■■■ 4.09
CPNE1-203ENST00000397442 ZMYM4Q5VZL5 1548 aa40.58■■■■■ 4.09
CPNE1-203ENST00000397442 MYT1LQ9UL68 1186 aa40.57■■■■■ 4.09
CPNE1-203ENST00000397442 CLSPNQ9HAW4 1339 aa40.54■■■■■ 4.08
CPNE1-203ENST00000397442 ABCA6Q8N139 1617 aa40.54■■■■■ 4.08
CPNE1-203ENST00000397442 DHX29Q7Z478 1369 aaKnown RBP40.5■■■■■ 4.07
CPNE1-203ENST00000397442 UNC13BO14795 1591 aa40.49■■■■■ 4.07
CPNE1-203ENST00000397442 PZPP20742 1482 aa40.49■■■■■ 4.07
CPNE1-203ENST00000397442 KDM5DQ9BY66 1539 aa40.48■■■■■ 4.07
CPNE1-203ENST00000397442 DIP2CQ9Y2E4 1556 aa40.47■■■■■ 4.07
CPNE1-203ENST00000397442 MPHOSPH9Q99550 1183 aa40.46■■■■■ 4.07
CPNE1-203ENST00000397442 A2MP01023 1474 aa40.45■■■■■ 4.07
CPNE1-203ENST00000397442 YEATS2Q9ULM3 1422 aa40.45■■■■■ 4.07
CPNE1-203ENST00000397442 ZEB1P37275 1124 aaPredicted RBP40.44■■■■■ 4.06
CPNE1-203ENST00000397442 EIF2AK4Q9P2K8 1649 aaKnown RBP40.43■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms