RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KCNH8Q96L42 1107 aa28.58■■■□□ 2.17
TSPAN4-204ENST00000397404 CAMSAP2Q08AD1 1489 aa28.57■■■□□ 2.16
TSPAN4-204ENST00000397404 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
TSPAN4-204ENST00000397404 CDC42BPBQ9Y5S2 1711 aa28.55■■■□□ 2.16
TSPAN4-204ENST00000397404 DNMT1P26358 1616 aaKnown RBP28.53■■■□□ 2.16
TSPAN4-204ENST00000397404 ARHGAP5Q13017 1502 aa28.53■■■□□ 2.16
TSPAN4-204ENST00000397404 AKNAQ7Z591 1439 aa28.52■■■□□ 2.16
TSPAN4-204ENST00000397404 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
TSPAN4-204ENST00000397404 EFCAB2Q5VUJ9 269 aa28.51■■■□□ 2.15
TSPAN4-204ENST00000397404 ACIN1Q9UKV3 1341 aaKnown RBP28.51■■■□□ 2.15
TSPAN4-204ENST00000397404 ARHGEF5Q12774 1597 aa28.49■■■□□ 2.15
TSPAN4-204ENST00000397404 GLI2P10070 1586 aa28.49■■■□□ 2.15
TSPAN4-204ENST00000397404 HRCP23327 699 aa28.48■■■□□ 2.15
TSPAN4-204ENST00000397404 DAPK1P53355 1430 aa28.48■■■□□ 2.15
TSPAN4-204ENST00000397404 ROCK1Q13464 1354 aa28.47■■■□□ 2.15
TSPAN4-204ENST00000397404 SHANK2Q9UPX8 1470 aa28.46■■■□□ 2.15
TSPAN4-204ENST00000397404 CFAP74Q9C0B2 1584 aa28.45■■■□□ 2.14
TSPAN4-204ENST00000397404 SAMD9LQ8IVG5 1584 aa28.44■■■□□ 2.14
TSPAN4-204ENST00000397404 ITGAEP38570 1179 aa28.43■■■□□ 2.14
TSPAN4-204ENST00000397404 HFM1A2PYH4 1435 aa28.42■■■□□ 2.14
TSPAN4-204ENST00000397404 ABCC5O15440 1437 aa28.42■■■□□ 2.14
TSPAN4-204ENST00000397404 ZNF777Q9ULD5 760 aaPredicted RBP28.42■■■□□ 2.14
TSPAN4-204ENST00000397404 SETD5Q9C0A6 1442 aa28.41■■■□□ 2.14
TSPAN4-204ENST00000397404 ZNF644Q9H582 1327 aaPredicted RBP28.4■■■□□ 2.14
TSPAN4-204ENST00000397404 CD109Q6YHK3 1445 aa28.39■■■□□ 2.14
TSPAN4-204ENST00000397404 CROCC2H7BZ55 1655 aa28.39■■■□□ 2.14
TSPAN4-204ENST00000397404 CCDC141Q6ZP82 1450 aa28.39■■■□□ 2.13
TSPAN4-204ENST00000397404 MBD5Q9P267 1494 aa28.39■■■□□ 2.13
TSPAN4-204ENST00000397404 FANCAO15360 1455 aa28.38■■■□□ 2.13
TSPAN4-204ENST00000397404 ADGRL2O95490 1459 aa28.37■■■□□ 2.13
TSPAN4-204ENST00000397404 PTPRKQ15262 1439 aa28.37■■■□□ 2.13
TSPAN4-204ENST00000397404 TSPY4P0CV99 314 aa28.36■■■□□ 2.13
TSPAN4-204ENST00000397404 TSPY10P0CW01 314 aa28.36■■■□□ 2.13
TSPAN4-204ENST00000397404 ABCC1P33527 1531 aa28.36■■■□□ 2.13
TSPAN4-204ENST00000397404 DNAJC5Q9H3Z4 198 aa28.34■■■□□ 2.13
TSPAN4-204ENST00000397404 ADGBQ8N7X0 1667 aa28.34■■■□□ 2.13
TSPAN4-204ENST00000397404 MAP3K4Q9Y6R4 1608 aa28.34■■■□□ 2.13
TSPAN4-204ENST00000397404 DIP2BQ9P265 1576 aa28.33■■■□□ 2.13
TSPAN4-204ENST00000397404 NEO1Q92859 1461 aa28.33■■■□□ 2.13
TSPAN4-204ENST00000397404 SYCP2Q9BX26 1530 aa28.32■■■□□ 2.12
TSPAN4-204ENST00000397404 GCC2Q8IWJ2 1684 aa28.31■■■□□ 2.12
TSPAN4-204ENST00000397404 MAST1Q9Y2H9 1570 aa28.31■■■□□ 2.12
TSPAN4-204ENST00000397404 ANKRD30AQ9BXX3 1397 aa28.3■■■□□ 2.12
TSPAN4-204ENST00000397404 NAIPQ13075 1403 aa28.29■■■□□ 2.12
TSPAN4-204ENST00000397404 C9orf84Q5VXU9 1444 aa28.28■■■□□ 2.12
TSPAN4-204ENST00000397404 RAB3GAP2Q9H2M9 1393 aa28.28■■■□□ 2.12
TSPAN4-204ENST00000397404 NCOA1Q15788 1441 aa28.27■■■□□ 2.12
TSPAN4-204ENST00000397404 ADGRL1O94910 1474 aa28.25■■■□□ 2.11
TSPAN4-204ENST00000397404 HNRNPMP52272 730 aaKnown RBP eCLIP28.25■■■□□ 2.11
TSPAN4-204ENST00000397404 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
TSPAN4-204ENST00000397404 RTEL1-TNFRSF6BF6WH68 1400 aa28.23■■■□□ 2.11
TSPAN4-204ENST00000397404 TEX14Q8IWB6 1497 aa28.23■■■□□ 2.11
TSPAN4-204ENST00000397404 ZEB1P37275 1124 aaPredicted RBP28.21■■■□□ 2.11
TSPAN4-204ENST00000397404 FAM69CQ0P6D2 419 aa28.21■■■□□ 2.11
TSPAN4-204ENST00000397404 CHIC2Q9UKJ5 165 aa28.2■■■□□ 2.1
TSPAN4-204ENST00000397404 PLXNC1O60486 1568 aa28.19■■■□□ 2.1
TSPAN4-204ENST00000397404 ARHGEF12Q9NZN5 1544 aa28.19■■■□□ 2.1
TSPAN4-204ENST00000397404 ZNF518AQ6AHZ1 1483 aa28.18■■■□□ 2.1
TSPAN4-204ENST00000397404 SCAPERQ9BY12 1400 aa28.18■■■□□ 2.1
TSPAN4-204ENST00000397404 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
TSPAN4-204ENST00000397404 RRP7BPQ9NSQ0 103 aa28.14■■■□□ 2.09
TSPAN4-204ENST00000397404 TRAPPC8Q9Y2L5 1435 aa28.12■■■□□ 2.09
TSPAN4-204ENST00000397404 KIF13AQ9H1H9 1805 aa28.11■■■□□ 2.09
TSPAN4-204ENST00000397404 KIF15Q9NS87 1388 aa28.1■■■□□ 2.09
TSPAN4-204ENST00000397404 POGZQ7Z3K3 1410 aa28.1■■■□□ 2.09
TSPAN4-204ENST00000397404 SPAG9O60271 1321 aaKnown RBP28.1■■■□□ 2.09
TSPAN4-204ENST00000397404 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
TSPAN4-204ENST00000397404 DENND4BO75064 1496 aaPredicted RBP28.08■■■□□ 2.09
TSPAN4-204ENST00000397404 DHX57Q6P158 1386 aaKnown RBP28.08■■■□□ 2.09
TSPAN4-204ENST00000397404 DUOX2Q9NRD8 1548 aa28.08■■■□□ 2.09
TSPAN4-204ENST00000397404 KDM5CP41229 1560 aa28.07■■■□□ 2.08
TSPAN4-204ENST00000397404 ZFYVE16Q7Z3T8 1539 aa28.06■■■□□ 2.08
TSPAN4-204ENST00000397404 INO80Q9ULG1 1556 aaPredicted RBP28.06■■■□□ 2.08
TSPAN4-204ENST00000397404 ERBINQ96RT1 1412 aa28.04■■■□□ 2.08
TSPAN4-204ENST00000397404 MLH3Q9UHC1 1453 aa28.04■■■□□ 2.08
TSPAN4-204ENST00000397404 ATP7AQ04656 1500 aa28.04■■■□□ 2.08
TSPAN4-204ENST00000397404 PPRC1Q5VV67 1664 aaKnown RBP28.02■■■□□ 2.08
TSPAN4-204ENST00000397404 AFAP1Q8N556 730 aa28.02■■■□□ 2.08
TSPAN4-204ENST00000397404 HECW2Q9P2P5 1572 aa27.98■■■□□ 2.07
TSPAN4-204ENST00000397404 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.07
TSPAN4-204ENST00000397404 RICTORQ6R327 1708 aa27.95■■■□□ 2.07
TSPAN4-204ENST00000397404 ZMYM4Q5VZL5 1548 aa27.93■■■□□ 2.06
TSPAN4-204ENST00000397404 KDM5DQ9BY66 1539 aa27.93■■■□□ 2.06
TSPAN4-204ENST00000397404 TSPOAP1O95153 1857 aa27.93■■■□□ 2.06
TSPAN4-204ENST00000397404 KDM6BO15054 1643 aa27.93■■■□□ 2.06
TSPAN4-204ENST00000397404 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
TSPAN4-204ENST00000397404 EIF2AK4Q9P2K8 1649 aaKnown RBP27.91■■■□□ 2.06
TSPAN4-204ENST00000397404 TRIM52Q96A61 297 aa27.89■■■□□ 2.06
TSPAN4-204ENST00000397404 DHX29Q7Z478 1369 aaKnown RBP27.89■■■□□ 2.06
TSPAN4-204ENST00000397404 UNC13BO14795 1591 aa27.87■■■□□ 2.05
TSPAN4-204ENST00000397404 MYT1LQ9UL68 1186 aa27.86■■■□□ 2.05
TSPAN4-204ENST00000397404 MPHOSPH9Q99550 1183 aa27.83■■■□□ 2.04
TSPAN4-204ENST00000397404 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
TSPAN4-204ENST00000397404 A2MP01023 1474 aa27.82■■■□□ 2.04
TSPAN4-204ENST00000397404 RAPGEF3O95398 923 aa27.81■■■□□ 2.04
TSPAN4-204ENST00000397404 NUP155O75694 1391 aa27.81■■■□□ 2.04
TSPAN4-204ENST00000397404 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
TSPAN4-204ENST00000397404 TIMELESSQ9UNS1 1208 aa27.79■■■□□ 2.04
TSPAN4-204ENST00000397404 SLC4A1APQ9BWU0 796 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-204ENST00000397404 DEPDC5O75140 1603 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms