RNA–Protein interactions for RNA: ENST00000396372.2

CALCA-203, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-203ENST00000396372 BCORL1Q5H9F3 1711 aa23.02■■□□□ 1.28
CALCA-203ENST00000396372 HECW2Q9P2P5 1572 aa23.01■■□□□ 1.27
CALCA-203ENST00000396372 POGZQ7Z3K3 1410 aa23.01■■□□□ 1.27
CALCA-203ENST00000396372 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
CALCA-203ENST00000396372 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
CALCA-203ENST00000396372 MADDQ8WXG6 1647 aa22.98■■□□□ 1.27
CALCA-203ENST00000396372 EFCAB2Q5VUJ9 269 aa22.98■■□□□ 1.27
CALCA-203ENST00000396372 YEATS2Q9ULM3 1422 aa22.98■■□□□ 1.27
CALCA-203ENST00000396372 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
CALCA-203ENST00000396372 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
CALCA-203ENST00000396372 SIGLEC1Q9BZZ2 1709 aa22.96■■□□□ 1.27
CALCA-203ENST00000396372 MAGI2Q86UL8 1455 aa22.94■■□□□ 1.26
CALCA-203ENST00000396372 PTPRMP28827 1452 aa22.93■■□□□ 1.26
CALCA-203ENST00000396372 RIMS1Q86UR5 1692 aaKnown RBP22.93■■□□□ 1.26
CALCA-203ENST00000396372 CDC42BPAQ5VT25 1732 aa22.92■■□□□ 1.26
CALCA-203ENST00000396372 ZNF518AQ6AHZ1 1483 aa22.9■■□□□ 1.26
CALCA-203ENST00000396372 CEP162Q5TB80 1403 aa22.89■■□□□ 1.25
CALCA-203ENST00000396372 KDM5CP41229 1560 aa22.88■■□□□ 1.25
CALCA-203ENST00000396372 ABCC1P33527 1531 aa22.87■■□□□ 1.25
CALCA-203ENST00000396372 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
CALCA-203ENST00000396372 FER1L4A9Z1Z3 1794 aa22.84■■□□□ 1.25
CALCA-203ENST00000396372 ATP10AO60312 1499 aa22.84■■□□□ 1.25
CALCA-203ENST00000396372 C9orf84Q5VXU9 1444 aa22.83■■□□□ 1.25
CALCA-203ENST00000396372 AFAP1Q8N556 730 aa22.82■■□□□ 1.24
CALCA-203ENST00000396372 MLECQ14165 292 aa22.81■■□□□ 1.24
CALCA-203ENST00000396372 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
CALCA-203ENST00000396372 ARHGEF12Q9NZN5 1544 aa22.81■■□□□ 1.24
CALCA-203ENST00000396372 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
CALCA-203ENST00000396372 ABCA6Q8N139 1617 aa22.8■■□□□ 1.24
CALCA-203ENST00000396372 MTUS2Q5JR59 1369 aa22.79■■□□□ 1.24
CALCA-203ENST00000396372 TRAPPC8Q9Y2L5 1435 aa22.79■■□□□ 1.24
CALCA-203ENST00000396372 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
CALCA-203ENST00000396372 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
CALCA-203ENST00000396372 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
CALCA-203ENST00000396372 ZNF777Q9ULD5 760 aaPredicted RBP22.76■■□□□ 1.23
CALCA-203ENST00000396372 EHBP1L1Q8N3D4 1523 aa22.76■■□□□ 1.23
CALCA-203ENST00000396372 SYCP2Q9BX26 1530 aa22.76■■□□□ 1.23
CALCA-203ENST00000396372 MLH3Q9UHC1 1453 aa22.74■■□□□ 1.23
CALCA-203ENST00000396372 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
CALCA-203ENST00000396372 KIDINS220Q9ULH0 1771 aa22.73■■□□□ 1.23
CALCA-203ENST00000396372 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
CALCA-203ENST00000396372 REREQ9P2R6 1566 aa22.72■■□□□ 1.23
CALCA-203ENST00000396372 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
CALCA-203ENST00000396372 LMTK3Q96Q04 1460 aa22.7■■□□□ 1.22
CALCA-203ENST00000396372 CFDP1Q9UEE9 299 aaPredicted RBP22.68■■□□□ 1.22
CALCA-203ENST00000396372 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
CALCA-203ENST00000396372 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
CALCA-203ENST00000396372 SUPT6HQ7KZ85 1726 aaKnown RBP22.64■■□□□ 1.21
CALCA-203ENST00000396372 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
CALCA-203ENST00000396372 AGLP35573 1532 aa22.62■■□□□ 1.21
CALCA-203ENST00000396372 ATP7AQ04656 1500 aa22.62■■□□□ 1.21
CALCA-203ENST00000396372 SPAG9O60271 1321 aaKnown RBP22.62■■□□□ 1.21
CALCA-203ENST00000396372 VPS8Q8N3P4 1428 aa22.62■■□□□ 1.21
CALCA-203ENST00000396372 KIAA1107Q9UPP5 1409 aa22.62■■□□□ 1.21
CALCA-203ENST00000396372 PREX1Q8TCU6 1659 aa22.59■■□□□ 1.21
CALCA-203ENST00000396372 NCOA2Q15596 1464 aa22.59■■□□□ 1.21
CALCA-203ENST00000396372 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
CALCA-203ENST00000396372 CEBPAP49715 358 aaPredicted RBP22.57■■□□□ 1.2
CALCA-203ENST00000396372 HSPA2P54652 639 aa22.57■■□□□ 1.2
CALCA-203ENST00000396372 C3P01024 1663 aa22.56■■□□□ 1.2
CALCA-203ENST00000396372 ESF1Q9H501 851 aaKnown RBP22.53■■□□□ 1.2
CALCA-203ENST00000396372 PLXNC1O60486 1568 aa22.53■■□□□ 1.2
CALCA-203ENST00000396372 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
CALCA-203ENST00000396372 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
CALCA-203ENST00000396372 CAMSAP2Q08AD1 1489 aa22.52■■□□□ 1.2
CALCA-203ENST00000396372 A2MP01023 1474 aa22.51■■□□□ 1.19
CALCA-203ENST00000396372 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
CALCA-203ENST00000396372 MBD5Q9P267 1494 aa22.51■■□□□ 1.19
CALCA-203ENST00000396372 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
CALCA-203ENST00000396372 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
CALCA-203ENST00000396372 MROH2AA6NES4 1674 aa22.47■■□□□ 1.19
CALCA-203ENST00000396372 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
CALCA-203ENST00000396372 CLTCQ00610 1675 aaKnown RBP22.46■■□□□ 1.19
CALCA-203ENST00000396372 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
CALCA-203ENST00000396372 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
CALCA-203ENST00000396372 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
CALCA-203ENST00000396372 KANK4Q5T7N3 995 aaPredicted RBP22.41■■□□□ 1.18
CALCA-203ENST00000396372 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
CALCA-203ENST00000396372 GGT6Q6P531 493 aa22.38■■□□□ 1.17
CALCA-203ENST00000396372 STRCQ7RTU9 1775 aa22.37■■□□□ 1.17
CALCA-203ENST00000396372 ZMYM3Q14202 1370 aa22.35■■□□□ 1.17
CALCA-203ENST00000396372 MYOM3Q5VTT5 1437 aa22.34■■□□□ 1.17
CALCA-203ENST00000396372 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
CALCA-203ENST00000396372 NPATQ14207 1427 aa22.33■■□□□ 1.17
CALCA-203ENST00000396372 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
CALCA-203ENST00000396372 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
CALCA-203ENST00000396372 APLP2Q06481 763 aa22.31■■□□□ 1.16
CALCA-203ENST00000396372 MIA2Q96PC5 1412 aa22.3■■□□□ 1.16
CALCA-203ENST00000396372 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
CALCA-203ENST00000396372 KIF3BO15066 747 aa22.29■■□□□ 1.16
CALCA-203ENST00000396372 TSPY4P0CV99 314 aa22.29■■□□□ 1.16
CALCA-203ENST00000396372 TSPY10P0CW01 314 aa22.29■■□□□ 1.16
CALCA-203ENST00000396372 ZNF142P52746 1687 aaPredicted RBP22.27■■□□□ 1.16
CALCA-203ENST00000396372 PTPRKQ15262 1439 aa22.27■■□□□ 1.16
CALCA-203ENST00000396372 FBXO41Q8TF61 875 aa22.27■■□□□ 1.16
CALCA-203ENST00000396372 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
CALCA-203ENST00000396372 PTPN23Q9H3S7 1636 aa22.25■■□□□ 1.15
CALCA-203ENST00000396372 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
CALCA-203ENST00000396372 CAMSAP1Q5T5Y3 1602 aa22.24■■□□□ 1.15
CALCA-203ENST00000396372 CROCC2H7BZ55 1655 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms