RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 ZMYM4Q5VZL5 1548 aa30.69■■■□□ 2.5
CDKN1B-202ENST00000396340 FRMPD1Q5SYB0 1578 aa30.69■■■□□ 2.5
CDKN1B-202ENST00000396340 CDC42BPBQ9Y5S2 1711 aa30.69■■■□□ 2.5
CDKN1B-202ENST00000396340 SCAPERQ9BY12 1400 aa30.67■■■□□ 2.5
CDKN1B-202ENST00000396340 VPS8Q8N3P4 1428 aa30.65■■■□□ 2.5
CDKN1B-202ENST00000396340 KDM4FA0A1W2PPD8 638 aa30.65■■■□□ 2.5
CDKN1B-202ENST00000396340 CDC42BPAQ5VT25 1732 aa30.64■■■□□ 2.5
CDKN1B-202ENST00000396340 ZNF518AQ6AHZ1 1483 aa30.64■■■□□ 2.5
CDKN1B-202ENST00000396340 EHBP1L1Q8N3D4 1523 aa30.64■■■□□ 2.5
CDKN1B-202ENST00000396340 POGZQ7Z3K3 1410 aa30.64■■■□□ 2.49
CDKN1B-202ENST00000396340 ARHGEF40Q8TER5 1519 aa30.61■■■□□ 2.49
CDKN1B-202ENST00000396340 ZFYVE16Q7Z3T8 1539 aa30.57■■■□□ 2.49
CDKN1B-202ENST00000396340 CCNB3Q8WWL7 1395 aa30.56■■■□□ 2.48
CDKN1B-202ENST00000396340 ITSN2Q9NZM3 1697 aa30.56■■■□□ 2.48
CDKN1B-202ENST00000396340 MAP3K1Q13233 1512 aa30.55■■■□□ 2.48
CDKN1B-202ENST00000396340 PLEKHH2Q8IVE3 1493 aa30.55■■■□□ 2.48
CDKN1B-202ENST00000396340 SUPT6HQ7KZ85 1726 aaKnown RBP30.53■■■□□ 2.48
CDKN1B-202ENST00000396340 GPATCH8Q9UKJ3 1502 aaKnown RBP30.52■■■□□ 2.48
CDKN1B-202ENST00000396340 KDM5CP41229 1560 aa30.52■■■□□ 2.48
CDKN1B-202ENST00000396340 TIAM1Q13009 1591 aa30.52■■■□□ 2.48
CDKN1B-202ENST00000396340 ABCC1P33527 1531 aa30.52■■■□□ 2.48
CDKN1B-202ENST00000396340 CFDP1Q9UEE9 299 aaPredicted RBP30.5■■■□□ 2.47
CDKN1B-202ENST00000396340 ARID4BQ4LE39 1312 aaPredicted RBP30.47■■■□□ 2.47
CDKN1B-202ENST00000396340 HECW2Q9P2P5 1572 aa30.46■■■□□ 2.47
CDKN1B-202ENST00000396340 APLP2Q06481 763 aa30.46■■■□□ 2.47
CDKN1B-202ENST00000396340 KIAA1107Q9UPP5 1409 aa30.46■■■□□ 2.47
CDKN1B-202ENST00000396340 BCORL1Q5H9F3 1711 aa30.44■■■□□ 2.46
CDKN1B-202ENST00000396340 ATP10AO60312 1499 aa30.44■■■□□ 2.46
CDKN1B-202ENST00000396340 MLH3Q9UHC1 1453 aa30.44■■■□□ 2.46
CDKN1B-202ENST00000396340 C9orf84Q5VXU9 1444 aa30.41■■■□□ 2.46
CDKN1B-202ENST00000396340 MYT1LQ9UL68 1186 aa30.41■■■□□ 2.46
CDKN1B-202ENST00000396340 ADAMTSL3P82987 1691 aa30.41■■■□□ 2.46
CDKN1B-202ENST00000396340 AFAP1Q8N556 730 aa30.4■■■□□ 2.46
CDKN1B-202ENST00000396340 ZNF777Q9ULD5 760 aaPredicted RBP30.4■■■□□ 2.46
CDKN1B-202ENST00000396340 SAMD9LQ8IVG5 1584 aa30.4■■■□□ 2.46
CDKN1B-202ENST00000396340 YEATS2Q9ULM3 1422 aa30.39■■■□□ 2.45
CDKN1B-202ENST00000396340 LRRC9Q6ZRR7 1453 aa30.38■■■□□ 2.45
CDKN1B-202ENST00000396340 REREQ9P2R6 1566 aa30.37■■■□□ 2.45
CDKN1B-202ENST00000396340 NCOA2Q15596 1464 aa30.36■■■□□ 2.45
CDKN1B-202ENST00000396340 RSPH4AQ5TD94 716 aa30.35■■■□□ 2.45
CDKN1B-202ENST00000396340 SYCP2Q9BX26 1530 aa30.33■■■□□ 2.45
CDKN1B-202ENST00000396340 ARHGEF12Q9NZN5 1544 aa30.32■■■□□ 2.44
CDKN1B-202ENST00000396340 TRAPPC8Q9Y2L5 1435 aa30.32■■■□□ 2.44
CDKN1B-202ENST00000396340 DIP2CQ9Y2E4 1556 aa30.28■■■□□ 2.44
CDKN1B-202ENST00000396340 SPAG9O60271 1321 aaKnown RBP30.28■■■□□ 2.44
CDKN1B-202ENST00000396340 KIDINS220Q9ULH0 1771 aa30.28■■■□□ 2.44
CDKN1B-202ENST00000396340 HNRNPMP52272 730 aaKnown RBP eCLIP30.25■■■□□ 2.43
CDKN1B-202ENST00000396340 MADDQ8WXG6 1647 aa30.25■■■□□ 2.43
CDKN1B-202ENST00000396340 PTPRMP28827 1452 aa30.25■■■□□ 2.43
CDKN1B-202ENST00000396340 AGLP35573 1532 aa30.24■■■□□ 2.43
CDKN1B-202ENST00000396340 ABCA6Q8N139 1617 aa30.24■■■□□ 2.43
CDKN1B-202ENST00000396340 FER1L4A9Z1Z3 1794 aa30.22■■■□□ 2.43
CDKN1B-202ENST00000396340 ATP7AQ04656 1500 aa30.22■■■□□ 2.43
CDKN1B-202ENST00000396340 MIA2Q96PC5 1412 aa30.21■■■□□ 2.43
CDKN1B-202ENST00000396340 RTEL1-TNFRSF6BF6WH68 1400 aa30.2■■■□□ 2.42
CDKN1B-202ENST00000396340 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.42
CDKN1B-202ENST00000396340 RIMS1Q86UR5 1692 aaKnown RBP30.18■■■□□ 2.42
CDKN1B-202ENST00000396340 ADGBQ8N7X0 1667 aa30.17■■■□□ 2.42
CDKN1B-202ENST00000396340 SIGLEC1Q9BZZ2 1709 aa30.17■■■□□ 2.42
CDKN1B-202ENST00000396340 CAMSAP2Q08AD1 1489 aa30.17■■■□□ 2.42
CDKN1B-202ENST00000396340 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
CDKN1B-202ENST00000396340 MYOM3Q5VTT5 1437 aa30.15■■■□□ 2.42
CDKN1B-202ENST00000396340 CCDC141Q6ZP82 1450 aa30.15■■■□□ 2.42
CDKN1B-202ENST00000396340 ARHGEF5Q12774 1597 aa30.15■■■□□ 2.42
CDKN1B-202ENST00000396340 KANK4Q5T7N3 995 aaPredicted RBP30.13■■■□□ 2.41
CDKN1B-202ENST00000396340 ESF1Q9H501 851 aaKnown RBP30.13■■■□□ 2.41
CDKN1B-202ENST00000396340 TSPY4P0CV99 314 aa30.12■■■□□ 2.41
CDKN1B-202ENST00000396340 TSPY10P0CW01 314 aa30.12■■■□□ 2.41
CDKN1B-202ENST00000396340 ZNF644Q9H582 1327 aaPredicted RBP30.11■■■□□ 2.41
CDKN1B-202ENST00000396340 MLECQ14165 292 aa30.1■■■□□ 2.41
CDKN1B-202ENST00000396340 A2MP01023 1474 aa30.07■■■□□ 2.4
CDKN1B-202ENST00000396340 CNTLNQ9NXG0 1405 aa30.07■■■□□ 2.4
CDKN1B-202ENST00000396340 PPP6R1Q9UPN7 881 aa30.06■■■□□ 2.4
CDKN1B-202ENST00000396340 PLXNC1O60486 1568 aa30.05■■■□□ 2.4
CDKN1B-202ENST00000396340 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
CDKN1B-202ENST00000396340 MAST1Q9Y2H9 1570 aa29.98■■■□□ 2.39
CDKN1B-202ENST00000396340 MROH2AA6NES4 1674 aa29.98■■■□□ 2.39
CDKN1B-202ENST00000396340 DHX29Q7Z478 1369 aaKnown RBP29.97■■■□□ 2.39
CDKN1B-202ENST00000396340 PTPN23Q9H3S7 1636 aa29.95■■■□□ 2.38
CDKN1B-202ENST00000396340 FAM135AQ9P2D6 1515 aa29.94■■■□□ 2.38
CDKN1B-202ENST00000396340 FGD6Q6ZV73 1430 aa29.92■■■□□ 2.38
CDKN1B-202ENST00000396340 PREX1Q8TCU6 1659 aa29.91■■■□□ 2.38
CDKN1B-202ENST00000396340 SHANK2Q9UPX8 1470 aa29.89■■■□□ 2.38
CDKN1B-202ENST00000396340 C3P01024 1663 aa29.88■■■□□ 2.37
CDKN1B-202ENST00000396340 TCOF1Q13428 1488 aaKnown RBP29.88■■■□□ 2.37
CDKN1B-202ENST00000396340 CROCC2H7BZ55 1655 aa29.85■■■□□ 2.37
CDKN1B-202ENST00000396340 LMTK3Q96Q04 1460 aa29.85■■■□□ 2.37
CDKN1B-202ENST00000396340 GGT6Q6P531 493 aa29.84■■■□□ 2.37
CDKN1B-202ENST00000396340 DNMT1P26358 1616 aaKnown RBP29.83■■■□□ 2.37
CDKN1B-202ENST00000396340 EIF2AK4Q9P2K8 1649 aaKnown RBP29.83■■■□□ 2.37
CDKN1B-202ENST00000396340 NPATQ14207 1427 aa29.82■■■□□ 2.36
CDKN1B-202ENST00000396340 CLTCQ00610 1675 aaKnown RBP29.8■■■□□ 2.36
CDKN1B-202ENST00000396340 KIF3BO15066 747 aa29.8■■■□□ 2.36
CDKN1B-202ENST00000396340 PLPPR3Q6T4P5 718 aa29.8■■■□□ 2.36
CDKN1B-202ENST00000396340 DUOX2Q9NRD8 1548 aa29.8■■■□□ 2.36
CDKN1B-202ENST00000396340 UHRF1BP1Q6BDS2 1440 aa29.79■■■□□ 2.36
CDKN1B-202ENST00000396340 ZMYM3Q14202 1370 aa29.78■■■□□ 2.36
CDKN1B-202ENST00000396340 DAPK1P53355 1430 aa29.77■■■□□ 2.36
CDKN1B-202ENST00000396340 ABCC5O15440 1437 aa29.75■■■□□ 2.35
CDKN1B-202ENST00000396340 CEBPAP49715 358 aaPredicted RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms