RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
VAMP1-202ENST00000396308 CFDP1Q9UEE9 299 aaPredicted RBP23.31■■□□□ 1.32
VAMP1-202ENST00000396308 ARAP3Q8WWN8 1544 aa23.29■■□□□ 1.32
VAMP1-202ENST00000396308 CAMSAP2Q08AD1 1489 aa23.29■■□□□ 1.32
VAMP1-202ENST00000396308 CFAP74Q9C0B2 1584 aa23.27■■□□□ 1.32
VAMP1-202ENST00000396308 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
VAMP1-202ENST00000396308 PLCH2O75038 1416 aa23.23■■□□□ 1.31
VAMP1-202ENST00000396308 PLEKHH2Q8IVE3 1493 aa23.23■■□□□ 1.31
VAMP1-202ENST00000396308 GLI2P10070 1586 aa23.22■■□□□ 1.31
VAMP1-202ENST00000396308 SAMD9LQ8IVG5 1584 aa23.22■■□□□ 1.31
VAMP1-202ENST00000396308 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
VAMP1-202ENST00000396308 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
VAMP1-202ENST00000396308 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
VAMP1-202ENST00000396308 DIP2BQ9P265 1576 aa23.2■■□□□ 1.3
VAMP1-202ENST00000396308 ITGAEP38570 1179 aa23.2■■□□□ 1.3
VAMP1-202ENST00000396308 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
VAMP1-202ENST00000396308 ADGBQ8N7X0 1667 aa23.18■■□□□ 1.3
VAMP1-202ENST00000396308 ARHGEF5Q12774 1597 aa23.17■■□□□ 1.3
VAMP1-202ENST00000396308 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
VAMP1-202ENST00000396308 FANCAO15360 1455 aa23.15■■□□□ 1.3
VAMP1-202ENST00000396308 DAPK1P53355 1430 aa23.15■■□□□ 1.3
VAMP1-202ENST00000396308 CD109Q6YHK3 1445 aa23.15■■□□□ 1.3
VAMP1-202ENST00000396308 ABCC1P33527 1531 aa23.13■■□□□ 1.29
VAMP1-202ENST00000396308 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
VAMP1-202ENST00000396308 KIF13AQ9H1H9 1805 aa23.11■■□□□ 1.29
VAMP1-202ENST00000396308 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
VAMP1-202ENST00000396308 ZNF644Q9H582 1327 aaPredicted RBP23.1■■□□□ 1.29
VAMP1-202ENST00000396308 KIAA1107Q9UPP5 1409 aa23.1■■□□□ 1.29
VAMP1-202ENST00000396308 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
VAMP1-202ENST00000396308 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
VAMP1-202ENST00000396308 RSPH4AQ5TD94 716 aa23.08■■□□□ 1.29
VAMP1-202ENST00000396308 ABCC5O15440 1437 aa23.07■■□□□ 1.28
VAMP1-202ENST00000396308 TSPOAP1O95153 1857 aa23.06■■□□□ 1.28
VAMP1-202ENST00000396308 AKNAQ7Z591 1439 aa23.06■■□□□ 1.28
VAMP1-202ENST00000396308 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
VAMP1-202ENST00000396308 NEO1Q92859 1461 aa23.05■■□□□ 1.28
VAMP1-202ENST00000396308 FAM69CQ0P6D2 419 aa23.05■■□□□ 1.28
VAMP1-202ENST00000396308 TEX14Q8IWB6 1497 aa23.05■■□□□ 1.28
VAMP1-202ENST00000396308 MAST1Q9Y2H9 1570 aa23.03■■□□□ 1.28
VAMP1-202ENST00000396308 MBD5Q9P267 1494 aa23.03■■□□□ 1.28
VAMP1-202ENST00000396308 ROCK1Q13464 1354 aa23.02■■□□□ 1.28
VAMP1-202ENST00000396308 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
VAMP1-202ENST00000396308 C9orf84Q5VXU9 1444 aa23.01■■□□□ 1.27
VAMP1-202ENST00000396308 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
VAMP1-202ENST00000396308 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
VAMP1-202ENST00000396308 PTPRKQ15262 1439 aa23■■□□□ 1.27
VAMP1-202ENST00000396308 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
VAMP1-202ENST00000396308 ADGRL2O95490 1459 aa23■■□□□ 1.27
VAMP1-202ENST00000396308 HNRNPMP52272 730 aaKnown RBP eCLIP23■■□□□ 1.27
VAMP1-202ENST00000396308 ANKRD30AQ9BXX3 1397 aa22.99■■□□□ 1.27
VAMP1-202ENST00000396308 PPRC1Q5VV67 1664 aaKnown RBP22.97■■□□□ 1.27
VAMP1-202ENST00000396308 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
VAMP1-202ENST00000396308 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
VAMP1-202ENST00000396308 PLXNC1O60486 1568 aa22.96■■□□□ 1.27
VAMP1-202ENST00000396308 ZNF518AQ6AHZ1 1483 aa22.95■■□□□ 1.26
VAMP1-202ENST00000396308 ARHGEF12Q9NZN5 1544 aa22.95■■□□□ 1.26
VAMP1-202ENST00000396308 NAIPQ13075 1403 aa22.92■■□□□ 1.26
VAMP1-202ENST00000396308 RAB3GAP2Q9H2M9 1393 aa22.92■■□□□ 1.26
VAMP1-202ENST00000396308 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
VAMP1-202ENST00000396308 INO80Q9ULG1 1556 aaPredicted RBP22.91■■□□□ 1.26
VAMP1-202ENST00000396308 TRAPPC8Q9Y2L5 1435 aa22.91■■□□□ 1.26
VAMP1-202ENST00000396308 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
VAMP1-202ENST00000396308 DENND4BO75064 1496 aaPredicted RBP22.9■■□□□ 1.26
VAMP1-202ENST00000396308 NCOA1Q15788 1441 aa22.9■■□□□ 1.26
VAMP1-202ENST00000396308 POGZQ7Z3K3 1410 aa22.9■■□□□ 1.26
VAMP1-202ENST00000396308 ATP7AQ04656 1500 aa22.89■■□□□ 1.26
VAMP1-202ENST00000396308 ZFYVE16Q7Z3T8 1539 aa22.89■■□□□ 1.26
VAMP1-202ENST00000396308 RTEL1-TNFRSF6BF6WH68 1400 aa22.88■■□□□ 1.25
VAMP1-202ENST00000396308 KDM5CP41229 1560 aa22.88■■□□□ 1.25
VAMP1-202ENST00000396308 HECW2Q9P2P5 1572 aa22.88■■□□□ 1.25
VAMP1-202ENST00000396308 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
VAMP1-202ENST00000396308 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
VAMP1-202ENST00000396308 HRCP23327 699 aa22.86■■□□□ 1.25
VAMP1-202ENST00000396308 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
VAMP1-202ENST00000396308 DUOX2Q9NRD8 1548 aa22.84■■□□□ 1.25
VAMP1-202ENST00000396308 MYT1LQ9UL68 1186 aa22.84■■□□□ 1.25
VAMP1-202ENST00000396308 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
VAMP1-202ENST00000396308 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
VAMP1-202ENST00000396308 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
VAMP1-202ENST00000396308 AFAP1Q8N556 730 aa22.8■■□□□ 1.24
VAMP1-202ENST00000396308 KDM6BO15054 1643 aa22.79■■□□□ 1.24
VAMP1-202ENST00000396308 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
VAMP1-202ENST00000396308 MLH3Q9UHC1 1453 aa22.78■■□□□ 1.24
VAMP1-202ENST00000396308 FRMPD1Q5SYB0 1578 aa22.77■■□□□ 1.24
VAMP1-202ENST00000396308 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
VAMP1-202ENST00000396308 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
VAMP1-202ENST00000396308 ABCA6Q8N139 1617 aa22.72■■□□□ 1.23
VAMP1-202ENST00000396308 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
VAMP1-202ENST00000396308 MAGI2Q86UL8 1455 aa22.71■■□□□ 1.23
VAMP1-202ENST00000396308 UNC13BO14795 1591 aa22.71■■□□□ 1.23
VAMP1-202ENST00000396308 DHX57Q6P158 1386 aaKnown RBP22.7■■□□□ 1.22
VAMP1-202ENST00000396308 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
VAMP1-202ENST00000396308 DIP2CQ9Y2E4 1556 aa22.68■■□□□ 1.22
VAMP1-202ENST00000396308 CLSPNQ9HAW4 1339 aa22.67■■□□□ 1.22
VAMP1-202ENST00000396308 A2MP01023 1474 aa22.66■■□□□ 1.22
VAMP1-202ENST00000396308 KDM5DQ9BY66 1539 aa22.66■■□□□ 1.22
VAMP1-202ENST00000396308 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
VAMP1-202ENST00000396308 BCORL1Q5H9F3 1711 aa22.64■■□□□ 1.21
VAMP1-202ENST00000396308 DEPDC5O75140 1603 aa22.64■■□□□ 1.21
VAMP1-202ENST00000396308 DHX29Q7Z478 1369 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms