RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 DNMBPQ6XZF7 1577 aa9.9□□□□□ -0.82
CCP110-202ENST00000396208 MYH16Q9H6N6 1097 aa9.9□□□□□ -0.83
CCP110-202ENST00000396208 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
CCP110-202ENST00000396208 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
CCP110-202ENST00000396208 TMF1P82094 1093 aa9.89□□□□□ -0.83
CCP110-202ENST00000396208 PLEKHH2Q8IVE3 1493 aa9.89□□□□□ -0.83
CCP110-202ENST00000396208 EVA1CP58658 441 aa9.89□□□□□ -0.83
CCP110-202ENST00000396208 NUP155O75694 1391 aa9.89□□□□□ -0.83
CCP110-202ENST00000396208 STK26Q9P289 416 aa9.87□□□□□ -0.83
CCP110-202ENST00000396208 ANKLE2Q86XL3 938 aa9.87□□□□□ -0.83
CCP110-202ENST00000396208 TERF2IPQ9NYB0 399 aa9.86□□□□□ -0.83
CCP110-202ENST00000396208 FHOD3Q2V2M9 1422 aa9.86□□□□□ -0.83
CCP110-202ENST00000396208 WASHC2AQ641Q2 1341 aa9.86□□□□□ -0.83
CCP110-202ENST00000396208 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
CCP110-202ENST00000396208 TEX14Q8IWB6 1497 aa9.85□□□□□ -0.83
CCP110-202ENST00000396208 IGF1RP08069 1367 aa9.84□□□□□ -0.83
CCP110-202ENST00000396208 DCAF11Q8TEB1 546 aa9.84□□□□□ -0.83
CCP110-202ENST00000396208 PSME1Q06323 249 aa9.84□□□□□ -0.83
CCP110-202ENST00000396208 PKD2Q13563 968 aa9.84□□□□□ -0.83
CCP110-202ENST00000396208 BICRAQ9NZM4 1560 aa9.83□□□□□ -0.84
CCP110-202ENST00000396208 VPS8Q8N3P4 1428 aa9.83□□□□□ -0.84
CCP110-202ENST00000396208 HRCP23327 699 aa9.83□□□□□ -0.84
CCP110-202ENST00000396208 CHMP4BQ9H444 224 aaKnown RBP9.83□□□□□ -0.84
CCP110-202ENST00000396208 RTF1Q92541 710 aaKnown RBP9.83□□□□□ -0.84
CCP110-202ENST00000396208 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
CCP110-202ENST00000396208 PROSER2Q86WR7 435 aaPredicted RBP9.83□□□□□ -0.84
CCP110-202ENST00000396208 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
CCP110-202ENST00000396208 POLA1P09884 1462 aaPredicted RBP9.81□□□□□ -0.84
CCP110-202ENST00000396208 PLB1Q6P1J6 1458 aa9.81□□□□□ -0.84
CCP110-202ENST00000396208 KIAA0586Q9BVV6 1533 aa9.8□□□□□ -0.84
CCP110-202ENST00000396208 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
CCP110-202ENST00000396208 BCL11AQ9H165 835 aa9.8□□□□□ -0.84
CCP110-202ENST00000396208 TIMELESSQ9UNS1 1208 aa9.8□□□□□ -0.84
CCP110-202ENST00000396208 EIF5BO60841 1220 aaKnown RBP9.79□□□□□ -0.84
CCP110-202ENST00000396208 SAFB2Q14151 953 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCP110-202ENST00000396208 ARHGAP5Q13017 1502 aa9.79□□□□□ -0.84
CCP110-202ENST00000396208 CALD1Q05682 793 aaKnown RBP9.79□□□□□ -0.84
CCP110-202ENST00000396208 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
CCP110-202ENST00000396208 CD109Q6YHK3 1445 aa9.78□□□□□ -0.84
CCP110-202ENST00000396208 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
CCP110-202ENST00000396208 MYOM3Q5VTT5 1437 aa9.78□□□□□ -0.84
CCP110-202ENST00000396208 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
CCP110-202ENST00000396208 G3V3G9 751 aa9.77□□□□□ -0.85
CCP110-202ENST00000396208 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
CCP110-202ENST00000396208 AMPHP49418 695 aa9.77□□□□□ -0.85
CCP110-202ENST00000396208 SOX12O15370 315 aa9.76□□□□□ -0.85
CCP110-202ENST00000396208 SETD5Q9C0A6 1442 aa9.76□□□□□ -0.85
CCP110-202ENST00000396208 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
CCP110-202ENST00000396208 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
CCP110-202ENST00000396208 TOM1O60784 492 aa9.76□□□□□ -0.85
CCP110-202ENST00000396208 MORC1Q86VD1 984 aa9.76□□□□□ -0.85
CCP110-202ENST00000396208 GPRASP1Q5JY77 1395 aa9.76□□□□□ -0.85
CCP110-202ENST00000396208 MSH5O43196 834 aa9.75□□□□□ -0.85
CCP110-202ENST00000396208 SLC52A1Q9NWF4 448 aa9.75□□□□□ -0.85
CCP110-202ENST00000396208 MS4A1P11836 297 aa9.74□□□□□ -0.85
CCP110-202ENST00000396208 CCDC144AA2RUR9 1427 aa9.74□□□□□ -0.85
CCP110-202ENST00000396208 ANO8Q9HCE9 1232 aaPredicted RBP9.74□□□□□ -0.85
CCP110-202ENST00000396208 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
CCP110-202ENST00000396208 U2SURPO15042 1029 aaKnown RBP9.73□□□□□ -0.85
CCP110-202ENST00000396208 CUX1P39880 1505 aa9.72□□□□□ -0.85
CCP110-202ENST00000396208 DHX57Q6P158 1386 aaKnown RBP9.72□□□□□ -0.85
CCP110-202ENST00000396208 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
CCP110-202ENST00000396208 UPF2Q9HAU5 1272 aaKnown RBP9.71□□□□□ -0.85
CCP110-202ENST00000396208 EFCAB5A4FU69 1503 aa9.71□□□□□ -0.85
CCP110-202ENST00000396208 GRIN2AQ12879 1464 aa9.71□□□□□ -0.85
CCP110-202ENST00000396208 EVC2Q86UK5 1308 aa9.71□□□□□ -0.85
CCP110-202ENST00000396208 PIP4K2BP78356 416 aa9.71□□□□□ -0.85
CCP110-202ENST00000396208 SCAPERQ9BY12 1400 aa9.7□□□□□ -0.86
CCP110-202ENST00000396208 MPHOSPH9Q99550 1183 aa9.7□□□□□ -0.86
CCP110-202ENST00000396208 ERICH3Q5RHP9 1530 aa9.7□□□□□ -0.86
CCP110-202ENST00000396208 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
CCP110-202ENST00000396208 ROCK2O75116 1388 aaKnown RBP9.69□□□□□ -0.86
CCP110-202ENST00000396208 C1orf141Q5JVX7 400 aa9.69□□□□□ -0.86
CCP110-202ENST00000396208 MRS2Q9HD23 443 aa9.69□□□□□ -0.86
CCP110-202ENST00000396208 DENND4BO75064 1496 aaPredicted RBP9.68□□□□□ -0.86
CCP110-202ENST00000396208 COG3Q96JB2 828 aa9.68□□□□□ -0.86
CCP110-202ENST00000396208 KIF15Q9NS87 1388 aa9.68□□□□□ -0.86
CCP110-202ENST00000396208 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
CCP110-202ENST00000396208 LAS1LQ9Y4W2 734 aaKnown RBP9.66□□□□□ -0.86
CCP110-202ENST00000396208 AFAP1Q8N556 730 aa9.66□□□□□ -0.86
CCP110-202ENST00000396208 TROQ12816 1431 aaPredicted RBP9.66□□□□□ -0.86
CCP110-202ENST00000396208 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
CCP110-202ENST00000396208 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
CCP110-202ENST00000396208 RAPGEF3O95398 923 aa9.65□□□□□ -0.86
CCP110-202ENST00000396208 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
CCP110-202ENST00000396208 PEG3Q9GZU2 1588 aa9.65□□□□□ -0.86
CCP110-202ENST00000396208 CUL7Q14999 1698 aa9.65□□□□□ -0.86
CCP110-202ENST00000396208 FAM9BQ8IZU0 186 aa9.65□□□□□ -0.86
CCP110-202ENST00000396208 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
CCP110-202ENST00000396208 LRPPRCP42704 1394 aaKnown RBP9.65□□□□□ -0.87
CCP110-202ENST00000396208 IQGAP2Q13576 1575 aa9.64□□□□□ -0.87
CCP110-202ENST00000396208 FYCO1Q9BQS8 1478 aa9.64□□□□□ -0.87
CCP110-202ENST00000396208 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
CCP110-202ENST00000396208 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
CCP110-202ENST00000396208 TNNT2P45379 298 aaPredicted RBP9.64□□□□□ -0.87
CCP110-202ENST00000396208 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
CCP110-202ENST00000396208 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
CCP110-202ENST00000396208 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
CCP110-202ENST00000396208 HSP90B1P14625 803 aaKnown RBP9.63□□□□□ -0.87
CCP110-202ENST00000396208 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms