RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 AKNAQ7Z591 1439 aa15.74■□□□□ 0.11
THUMPD1-202ENST00000396083 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
THUMPD1-202ENST00000396083 CDC42BPBQ9Y5S2 1711 aa15.73■□□□□ 0.11
THUMPD1-202ENST00000396083 NCOA2Q15596 1464 aa15.73■□□□□ 0.11
THUMPD1-202ENST00000396083 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
THUMPD1-202ENST00000396083 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
THUMPD1-202ENST00000396083 GPATCH8Q9UKJ3 1502 aaKnown RBP15.72■□□□□ 0.11
THUMPD1-202ENST00000396083 ADGRL1O94910 1474 aa15.72■□□□□ 0.11
THUMPD1-202ENST00000396083 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
THUMPD1-202ENST00000396083 HNRNPMP52272 730 aaKnown RBP eCLIP15.71■□□□□ 0.11
THUMPD1-202ENST00000396083 SUPT6HQ7KZ85 1726 aaKnown RBP15.7■□□□□ 0.1
THUMPD1-202ENST00000396083 NEO1Q92859 1461 aa15.69■□□□□ 0.1
THUMPD1-202ENST00000396083 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
THUMPD1-202ENST00000396083 DENND4BO75064 1496 aaPredicted RBP15.66■□□□□ 0.1
THUMPD1-202ENST00000396083 PHLDB1Q86UU1 1377 aa15.65■□□□□ 0.1
THUMPD1-202ENST00000396083 ARAP3Q8WWN8 1544 aa15.65■□□□□ 0.1
THUMPD1-202ENST00000396083 MAP3K1Q13233 1512 aa15.64■□□□□ 0.09
THUMPD1-202ENST00000396083 ARHGEF12Q9NZN5 1544 aa15.64■□□□□ 0.09
THUMPD1-202ENST00000396083 TRAPPC8Q9Y2L5 1435 aa15.63■□□□□ 0.09
THUMPD1-202ENST00000396083 SAMD9LQ8IVG5 1584 aa15.63■□□□□ 0.09
THUMPD1-202ENST00000396083 SYCP2Q9BX26 1530 aa15.63■□□□□ 0.09
THUMPD1-202ENST00000396083 CFAP74Q9C0B2 1584 aa15.62■□□□□ 0.09
THUMPD1-202ENST00000396083 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
THUMPD1-202ENST00000396083 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
THUMPD1-202ENST00000396083 FAM50AQ14320 339 aaKnown RBP15.61■□□□□ 0.09
THUMPD1-202ENST00000396083 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
THUMPD1-202ENST00000396083 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
THUMPD1-202ENST00000396083 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
THUMPD1-202ENST00000396083 ITSN2Q9NZM3 1697 aa15.59■□□□□ 0.09
THUMPD1-202ENST00000396083 MLECQ14165 292 aa15.59■□□□□ 0.09
THUMPD1-202ENST00000396083 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
THUMPD1-202ENST00000396083 ABCC1P33527 1531 aa15.59■□□□□ 0.09
THUMPD1-202ENST00000396083 ITGAEP38570 1179 aa15.58■□□□□ 0.08
THUMPD1-202ENST00000396083 CAMSAP2Q08AD1 1489 aa15.57■□□□□ 0.08
THUMPD1-202ENST00000396083 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
THUMPD1-202ENST00000396083 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
THUMPD1-202ENST00000396083 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
THUMPD1-202ENST00000396083 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
THUMPD1-202ENST00000396083 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
THUMPD1-202ENST00000396083 MBD5Q9P267 1494 aa15.51■□□□□ 0.07
THUMPD1-202ENST00000396083 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
THUMPD1-202ENST00000396083 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
THUMPD1-202ENST00000396083 ZFYVE16Q7Z3T8 1539 aa15.51■□□□□ 0.07
THUMPD1-202ENST00000396083 KIAA1107Q9UPP5 1409 aa15.5■□□□□ 0.07
THUMPD1-202ENST00000396083 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
THUMPD1-202ENST00000396083 KDM4FA0A1W2PPD8 638 aa15.49■□□□□ 0.07
THUMPD1-202ENST00000396083 PLEKHH2Q8IVE3 1493 aa15.49■□□□□ 0.07
THUMPD1-202ENST00000396083 MIA2Q96PC5 1412 aa15.48■□□□□ 0.07
THUMPD1-202ENST00000396083 KDM5CP41229 1560 aa15.48■□□□□ 0.07
THUMPD1-202ENST00000396083 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
THUMPD1-202ENST00000396083 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
THUMPD1-202ENST00000396083 SIGLEC1Q9BZZ2 1709 aa15.47■□□□□ 0.07
THUMPD1-202ENST00000396083 ZMYM4Q5VZL5 1548 aa15.47■□□□□ 0.07
THUMPD1-202ENST00000396083 ARHGEF40Q8TER5 1519 aa15.47■□□□□ 0.07
THUMPD1-202ENST00000396083 CCDC141Q6ZP82 1450 aa15.47■□□□□ 0.07
THUMPD1-202ENST00000396083 ABCA6Q8N139 1617 aa15.46■□□□□ 0.07
THUMPD1-202ENST00000396083 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.06
THUMPD1-202ENST00000396083 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
THUMPD1-202ENST00000396083 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
THUMPD1-202ENST00000396083 MLH3Q9UHC1 1453 aa15.44■□□□□ 0.06
THUMPD1-202ENST00000396083 ATP10AO60312 1499 aa15.44■□□□□ 0.06
THUMPD1-202ENST00000396083 DIP2CQ9Y2E4 1556 aa15.44■□□□□ 0.06
THUMPD1-202ENST00000396083 GGT6Q6P531 493 aa15.44■□□□□ 0.06
THUMPD1-202ENST00000396083 MAGI2Q86UL8 1455 aa15.43■□□□□ 0.06
THUMPD1-202ENST00000396083 ABCC5O15440 1437 aa15.42■□□□□ 0.06
THUMPD1-202ENST00000396083 C9orf84Q5VXU9 1444 aa15.41■□□□□ 0.06
THUMPD1-202ENST00000396083 RSPH4AQ5TD94 716 aa15.41■□□□□ 0.06
THUMPD1-202ENST00000396083 DAPK1P53355 1430 aa15.41■□□□□ 0.06
THUMPD1-202ENST00000396083 KIF3BO15066 747 aa15.4■□□□□ 0.06
THUMPD1-202ENST00000396083 INO80Q9ULG1 1556 aaPredicted RBP15.39■□□□□ 0.05
THUMPD1-202ENST00000396083 TCOF1Q13428 1488 aaKnown RBP15.38■□□□□ 0.05
THUMPD1-202ENST00000396083 ARHGEF5Q12774 1597 aa15.38■□□□□ 0.05
THUMPD1-202ENST00000396083 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
THUMPD1-202ENST00000396083 A2MP01023 1474 aa15.37■□□□□ 0.05
THUMPD1-202ENST00000396083 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
THUMPD1-202ENST00000396083 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
THUMPD1-202ENST00000396083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.054e-12■□□□□ 11.2
THUMPD1-202ENST00000396083 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
THUMPD1-202ENST00000396083 KIF15Q9NS87 1388 aa15.35■□□□□ 0.05
THUMPD1-202ENST00000396083 MADDQ8WXG6 1647 aa15.34■□□□□ 0.05
THUMPD1-202ENST00000396083 RTEL1-TNFRSF6BF6WH68 1400 aa15.34■□□□□ 0.05
THUMPD1-202ENST00000396083 BCORL1Q5H9F3 1711 aa15.33■□□□□ 0.05
THUMPD1-202ENST00000396083 ADGBQ8N7X0 1667 aa15.33■□□□□ 0.04
THUMPD1-202ENST00000396083 DHX29Q7Z478 1369 aaKnown RBP15.32■□□□□ 0.04
THUMPD1-202ENST00000396083 CROCC2H7BZ55 1655 aa15.32■□□□□ 0.04
THUMPD1-202ENST00000396083 RRBP1Q9P2E9 1410 aaKnown RBP15.31■□□□□ 0.04
THUMPD1-202ENST00000396083 ANKRD30AQ9BXX3 1397 aa15.31■□□□□ 0.04
THUMPD1-202ENST00000396083 RIMS1Q86UR5 1692 aaKnown RBP15.31■□□□□ 0.04
THUMPD1-202ENST00000396083 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
THUMPD1-202ENST00000396083 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
THUMPD1-202ENST00000396083 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
THUMPD1-202ENST00000396083 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
THUMPD1-202ENST00000396083 PTPRMP28827 1452 aa15.27■□□□□ 0.04
THUMPD1-202ENST00000396083 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
THUMPD1-202ENST00000396083 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.03
THUMPD1-202ENST00000396083 MAST1Q9Y2H9 1570 aa15.27■□□□□ 0.03
THUMPD1-202ENST00000396083 CFAP65Q6ZU64 1925 aaKnown RBP15.26■□□□□ 0.03
THUMPD1-202ENST00000396083 REREQ9P2R6 1566 aa15.25■□□□□ 0.03
THUMPD1-202ENST00000396083 AGLP35573 1532 aa15.24■□□□□ 0.03
THUMPD1-202ENST00000396083 DUOX2Q9NRD8 1548 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms