RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 FYCO1Q9BQS8 1478 aa26.39■■□□□ 1.82
CXCL12-206ENST00000395795 SIGLEC1Q9BZZ2 1709 aa26.39■■□□□ 1.81
CXCL12-206ENST00000395795 BCORL1Q5H9F3 1711 aa26.37■■□□□ 1.81
CXCL12-206ENST00000395795 EFCAB2Q5VUJ9 269 aa26.36■■□□□ 1.81
CXCL12-206ENST00000395795 MAGI2Q86UL8 1455 aa26.35■■□□□ 1.81
CXCL12-206ENST00000395795 ZFYVE16Q7Z3T8 1539 aa26.34■■□□□ 1.81
CXCL12-206ENST00000395795 HECW2Q9P2P5 1572 aa26.33■■□□□ 1.81
CXCL12-206ENST00000395795 PTPRMP28827 1452 aa26.32■■□□□ 1.8
CXCL12-206ENST00000395795 CDC42BPBQ9Y5S2 1711 aa26.32■■□□□ 1.8
CXCL12-206ENST00000395795 ARHGAP5Q13017 1502 aa26.29■■□□□ 1.8
CXCL12-206ENST00000395795 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
CXCL12-206ENST00000395795 PREX2Q70Z35 1606 aa26.28■■□□□ 1.8
CXCL12-206ENST00000395795 ARHGEF12Q9NZN5 1544 aa26.27■■□□□ 1.8
CXCL12-206ENST00000395795 KDM5CP41229 1560 aa26.27■■□□□ 1.8
CXCL12-206ENST00000395795 ARID4BQ4LE39 1312 aaPredicted RBP26.25■■□□□ 1.79
CXCL12-206ENST00000395795 AFAP1Q8N556 730 aa26.24■■□□□ 1.79
CXCL12-206ENST00000395795 ZNF518AQ6AHZ1 1483 aa26.23■■□□□ 1.79
CXCL12-206ENST00000395795 CEP162Q5TB80 1403 aa26.23■■□□□ 1.79
CXCL12-206ENST00000395795 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
CXCL12-206ENST00000395795 ABCC1P33527 1531 aa26.22■■□□□ 1.79
CXCL12-206ENST00000395795 ATP10AO60312 1499 aa26.22■■□□□ 1.79
CXCL12-206ENST00000395795 TRAPPC8Q9Y2L5 1435 aa26.21■■□□□ 1.79
CXCL12-206ENST00000395795 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
CXCL12-206ENST00000395795 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
CXCL12-206ENST00000395795 RIMS1Q86UR5 1692 aaKnown RBP26.16■■□□□ 1.78
CXCL12-206ENST00000395795 MLH3Q9UHC1 1453 aa26.15■■□□□ 1.78
CXCL12-206ENST00000395795 ITSN2Q9NZM3 1697 aa26.15■■□□□ 1.78
CXCL12-206ENST00000395795 DIP2CQ9Y2E4 1556 aa26.14■■□□□ 1.78
CXCL12-206ENST00000395795 SAMD9LQ8IVG5 1584 aa26.13■■□□□ 1.77
CXCL12-206ENST00000395795 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
CXCL12-206ENST00000395795 ABCA6Q8N139 1617 aa26.11■■□□□ 1.77
CXCL12-206ENST00000395795 REREQ9P2R6 1566 aa26.1■■□□□ 1.77
CXCL12-206ENST00000395795 MLECQ14165 292 aa26.08■■□□□ 1.77
CXCL12-206ENST00000395795 LMTK3Q96Q04 1460 aa26.08■■□□□ 1.77
CXCL12-206ENST00000395795 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
CXCL12-206ENST00000395795 MTUS2Q5JR59 1369 aa26.06■■□□□ 1.76
CXCL12-206ENST00000395795 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
CXCL12-206ENST00000395795 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
CXCL12-206ENST00000395795 EHBP1L1Q8N3D4 1523 aa26.03■■□□□ 1.76
CXCL12-206ENST00000395795 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
CXCL12-206ENST00000395795 KIAA1107Q9UPP5 1409 aa26.02■■□□□ 1.76
CXCL12-206ENST00000395795 AGLP35573 1532 aa26.01■■□□□ 1.75
CXCL12-206ENST00000395795 CCNB3Q8WWL7 1395 aa26.01■■□□□ 1.75
CXCL12-206ENST00000395795 ZNF777Q9ULD5 760 aaPredicted RBP26.01■■□□□ 1.75
CXCL12-206ENST00000395795 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.75
CXCL12-206ENST00000395795 CFDP1Q9UEE9 299 aaPredicted RBP25.99■■□□□ 1.75
CXCL12-206ENST00000395795 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
CXCL12-206ENST00000395795 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
CXCL12-206ENST00000395795 VPS8Q8N3P4 1428 aa25.95■■□□□ 1.74
CXCL12-206ENST00000395795 PLEKHH2Q8IVE3 1493 aa25.94■■□□□ 1.74
CXCL12-206ENST00000395795 CEBPAP49715 358 aaPredicted RBP25.93■■□□□ 1.74
CXCL12-206ENST00000395795 MYT1LQ9UL68 1186 aa25.93■■□□□ 1.74
CXCL12-206ENST00000395795 INO80Q9ULG1 1556 aaPredicted RBP25.93■■□□□ 1.74
CXCL12-206ENST00000395795 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
CXCL12-206ENST00000395795 NCOA2Q15596 1464 aa25.91■■□□□ 1.74
CXCL12-206ENST00000395795 SPAG9O60271 1321 aaKnown RBP25.9■■□□□ 1.74
CXCL12-206ENST00000395795 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
CXCL12-206ENST00000395795 HSPA2P54652 639 aa25.89■■□□□ 1.74
CXCL12-206ENST00000395795 PLXNC1O60486 1568 aa25.87■■□□□ 1.73
CXCL12-206ENST00000395795 ILDR1Q86SU0 546 aaPredicted RBP25.87■■□□□ 1.73
CXCL12-206ENST00000395795 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
CXCL12-206ENST00000395795 SUPT6HQ7KZ85 1726 aaKnown RBP25.83■■□□□ 1.73
CXCL12-206ENST00000395795 C3P01024 1663 aa25.81■■□□□ 1.72
CXCL12-206ENST00000395795 A2MP01023 1474 aa25.81■■□□□ 1.72
CXCL12-206ENST00000395795 KANK4Q5T7N3 995 aaPredicted RBP25.81■■□□□ 1.72
CXCL12-206ENST00000395795 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
CXCL12-206ENST00000395795 PREX1Q8TCU6 1659 aa25.79■■□□□ 1.72
CXCL12-206ENST00000395795 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
CXCL12-206ENST00000395795 RTEL1-TNFRSF6BF6WH68 1400 aa25.78■■□□□ 1.72
CXCL12-206ENST00000395795 CNTLNQ9NXG0 1405 aa25.75■■□□□ 1.71
CXCL12-206ENST00000395795 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
CXCL12-206ENST00000395795 ADGBQ8N7X0 1667 aa25.73■■□□□ 1.71
CXCL12-206ENST00000395795 CCDC141Q6ZP82 1450 aa25.72■■□□□ 1.71
CXCL12-206ENST00000395795 MROH2AA6NES4 1674 aa25.71■■□□□ 1.71
CXCL12-206ENST00000395795 ARHGEF5Q12774 1597 aa25.7■■□□□ 1.71
CXCL12-206ENST00000395795 ZMYM3Q14202 1370 aa25.69■■□□□ 1.7
CXCL12-206ENST00000395795 UHRF1BP1Q6BDS2 1440 aa25.69■■□□□ 1.7
CXCL12-206ENST00000395795 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
CXCL12-206ENST00000395795 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
CXCL12-206ENST00000395795 RSPH4AQ5TD94 716 aa25.66■■□□□ 1.7
CXCL12-206ENST00000395795 NPATQ14207 1427 aa25.65■■□□□ 1.7
CXCL12-206ENST00000395795 CLTCQ00610 1675 aaKnown RBP25.64■■□□□ 1.7
CXCL12-206ENST00000395795 ESF1Q9H501 851 aaKnown RBP25.64■■□□□ 1.7
CXCL12-206ENST00000395795 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
CXCL12-206ENST00000395795 GGT6Q6P531 493 aa25.63■■□□□ 1.69
CXCL12-206ENST00000395795 PTPRKQ15262 1439 aa25.62■■□□□ 1.69
CXCL12-206ENST00000395795 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
CXCL12-206ENST00000395795 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
CXCL12-206ENST00000395795 MAST1Q9Y2H9 1570 aa25.58■■□□□ 1.69
CXCL12-206ENST00000395795 FBXO41Q8TF61 875 aa25.56■■□□□ 1.68
CXCL12-206ENST00000395795 KIF3BO15066 747 aa25.54■■□□□ 1.68
CXCL12-206ENST00000395795 NCOA1Q15788 1441 aa25.53■■□□□ 1.68
CXCL12-206ENST00000395795 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
CXCL12-206ENST00000395795 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
CXCL12-206ENST00000395795 MYO3AQ8NEV4 1616 aa25.49■■□□□ 1.67
CXCL12-206ENST00000395795 PTPRTO14522 1441 aa25.49■■□□□ 1.67
CXCL12-206ENST00000395795 ZNF142P52746 1687 aaPredicted RBP25.48■■□□□ 1.67
CXCL12-206ENST00000395795 FAM135AQ9P2D6 1515 aa25.48■■□□□ 1.67
CXCL12-206ENST00000395795 KDM5DQ9BY66 1539 aa25.47■■□□□ 1.67
CXCL12-206ENST00000395795 ABCC5O15440 1437 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms