RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
PTPN20-207ENST00000395725 SCAPERQ9BY12 1400 aa18.54■□□□□ 0.56
PTPN20-207ENST00000395725 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
PTPN20-207ENST00000395725 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
PTPN20-207ENST00000395725 CDC42BPBQ9Y5S2 1711 aa18.53■□□□□ 0.56
PTPN20-207ENST00000395725 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.55
PTPN20-207ENST00000395725 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
PTPN20-207ENST00000395725 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
PTPN20-207ENST00000395725 CDC42BPAQ5VT25 1732 aa18.5■□□□□ 0.55
PTPN20-207ENST00000395725 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
PTPN20-207ENST00000395725 KDM5CP41229 1560 aa18.5■□□□□ 0.55
PTPN20-207ENST00000395725 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
PTPN20-207ENST00000395725 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
PTPN20-207ENST00000395725 MTUS2Q5JR59 1369 aa18.48■□□□□ 0.55
PTPN20-207ENST00000395725 ABCC1P33527 1531 aa18.47■□□□□ 0.55
PTPN20-207ENST00000395725 ADAMTSL3P82987 1691 aa18.47■□□□□ 0.55
PTPN20-207ENST00000395725 GPATCH8Q9UKJ3 1502 aaKnown RBP18.46■□□□□ 0.55
PTPN20-207ENST00000395725 BCORL1Q5H9F3 1711 aa18.45■□□□□ 0.54
PTPN20-207ENST00000395725 MLH3Q9UHC1 1453 aa18.45■□□□□ 0.54
PTPN20-207ENST00000395725 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
PTPN20-207ENST00000395725 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
PTPN20-207ENST00000395725 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
PTPN20-207ENST00000395725 ATP10AO60312 1499 aa18.44■□□□□ 0.54
PTPN20-207ENST00000395725 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
PTPN20-207ENST00000395725 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
PTPN20-207ENST00000395725 HECW2Q9P2P5 1572 aa18.42■□□□□ 0.54
PTPN20-207ENST00000395725 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
PTPN20-207ENST00000395725 C9orf84Q5VXU9 1444 aa18.42■□□□□ 0.54
PTPN20-207ENST00000395725 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
PTPN20-207ENST00000395725 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
PTPN20-207ENST00000395725 YEATS2Q9ULM3 1422 aa18.39■□□□□ 0.53
PTPN20-207ENST00000395725 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
PTPN20-207ENST00000395725 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
PTPN20-207ENST00000395725 AGLP35573 1532 aa18.36■□□□□ 0.53
PTPN20-207ENST00000395725 DIP2CQ9Y2E4 1556 aa18.35■□□□□ 0.53
PTPN20-207ENST00000395725 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
PTPN20-207ENST00000395725 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
PTPN20-207ENST00000395725 ARID4BQ4LE39 1312 aaPredicted RBP18.33■□□□□ 0.53
PTPN20-207ENST00000395725 PTPRMP28827 1452 aa18.33■□□□□ 0.53
PTPN20-207ENST00000395725 RSPH4AQ5TD94 716 aa18.33■□□□□ 0.53
PTPN20-207ENST00000395725 AFAP1Q8N556 730 aa18.33■□□□□ 0.53
PTPN20-207ENST00000395725 NCOA2Q15596 1464 aa18.33■□□□□ 0.52
PTPN20-207ENST00000395725 KIDINS220Q9ULH0 1771 aa18.31■□□□□ 0.52
PTPN20-207ENST00000395725 MADDQ8WXG6 1647 aa18.31■□□□□ 0.52
PTPN20-207ENST00000395725 SYCP2Q9BX26 1530 aa18.31■□□□□ 0.52
PTPN20-207ENST00000395725 ABCA6Q8N139 1617 aa18.3■□□□□ 0.52
PTPN20-207ENST00000395725 RTEL1-TNFRSF6BF6WH68 1400 aa18.29■□□□□ 0.52
PTPN20-207ENST00000395725 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
PTPN20-207ENST00000395725 INO80Q9ULG1 1556 aaPredicted RBP18.28■□□□□ 0.52
PTPN20-207ENST00000395725 MBD5Q9P267 1494 aa18.27■□□□□ 0.51
PTPN20-207ENST00000395725 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
PTPN20-207ENST00000395725 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
PTPN20-207ENST00000395725 FER1L4A9Z1Z3 1794 aa18.26■□□□□ 0.51
PTPN20-207ENST00000395725 ATP7AQ04656 1500 aa18.26■□□□□ 0.51
PTPN20-207ENST00000395725 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
PTPN20-207ENST00000395725 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
PTPN20-207ENST00000395725 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
PTPN20-207ENST00000395725 APLP2Q06481 763 aa18.23■□□□□ 0.51
PTPN20-207ENST00000395725 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
PTPN20-207ENST00000395725 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
PTPN20-207ENST00000395725 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
PTPN20-207ENST00000395725 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
PTPN20-207ENST00000395725 CCDC141Q6ZP82 1450 aa18.22■□□□□ 0.51
PTPN20-207ENST00000395725 PLXNC1O60486 1568 aa18.21■□□□□ 0.51
PTPN20-207ENST00000395725 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
PTPN20-207ENST00000395725 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.5
PTPN20-207ENST00000395725 MYOM3Q5VTT5 1437 aa18.2■□□□□ 0.5
PTPN20-207ENST00000395725 A2MP01023 1474 aa18.19■□□□□ 0.5
PTPN20-207ENST00000395725 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
PTPN20-207ENST00000395725 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
PTPN20-207ENST00000395725 MROH2AA6NES4 1674 aa18.16■□□□□ 0.5
PTPN20-207ENST00000395725 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
PTPN20-207ENST00000395725 ZNF644Q9H582 1327 aaPredicted RBP18.15■□□□□ 0.5
PTPN20-207ENST00000395725 SETD1BQ9UPS6 1966 aaKnown RBP18.13■□□□□ 0.49
PTPN20-207ENST00000395725 DHX29Q7Z478 1369 aaKnown RBP18.13■□□□□ 0.49
PTPN20-207ENST00000395725 MLECQ14165 292 aa18.12■□□□□ 0.49
PTPN20-207ENST00000395725 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
PTPN20-207ENST00000395725 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
PTPN20-207ENST00000395725 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
PTPN20-207ENST00000395725 TCOF1Q13428 1488 aaKnown RBP18.1■□□□□ 0.49
PTPN20-207ENST00000395725 LMTK3Q96Q04 1460 aa18.1■□□□□ 0.49
PTPN20-207ENST00000395725 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
PTPN20-207ENST00000395725 SHANK2Q9UPX8 1470 aa18.09■□□□□ 0.49
PTPN20-207ENST00000395725 NPATQ14207 1427 aa18.08■□□□□ 0.48
PTPN20-207ENST00000395725 C3P01024 1663 aa18.08■□□□□ 0.48
PTPN20-207ENST00000395725 PTPN23Q9H3S7 1636 aa18.07■□□□□ 0.48
PTPN20-207ENST00000395725 EIF2AK4Q9P2K8 1649 aaKnown RBP18.05■□□□□ 0.48
PTPN20-207ENST00000395725 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
PTPN20-207ENST00000395725 CROCC2H7BZ55 1655 aa18.03■□□□□ 0.48
PTPN20-207ENST00000395725 DNMT1P26358 1616 aaKnown RBP18.02■□□□□ 0.48
PTPN20-207ENST00000395725 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
PTPN20-207ENST00000395725 ZMYM3Q14202 1370 aa18.01■□□□□ 0.47
PTPN20-207ENST00000395725 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
PTPN20-207ENST00000395725 DUOX2Q9NRD8 1548 aa18■□□□□ 0.47
PTPN20-207ENST00000395725 CLTCQ00610 1675 aaKnown RBP18■□□□□ 0.47
PTPN20-207ENST00000395725 ABCC5O15440 1437 aa17.99■□□□□ 0.47
PTPN20-207ENST00000395725 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
PTPN20-207ENST00000395725 DAPK1P53355 1430 aa17.98■□□□□ 0.47
PTPN20-207ENST00000395725 ZC3H13Q5T200 1668 aaKnown RBP17.98■□□□□ 0.47
PTPN20-207ENST00000395725 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms