RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 SIGLEC1Q9BZZ2 1709 aa31.66■■■□□ 2.66
COL11A2-204ENST00000395194 SCAPERQ9BY12 1400 aa31.65■■■□□ 2.66
COL11A2-204ENST00000395194 CDK11AQ9UQ88 783 aaPredicted RBP31.62■■■□□ 2.65
COL11A2-204ENST00000395194 POGZQ7Z3K3 1410 aa31.61■■■□□ 2.65
COL11A2-204ENST00000395194 TROQ12816 1431 aaPredicted RBP31.59■■■□□ 2.65
COL11A2-204ENST00000395194 PCF11O94913 1555 aaKnown RBP31.59■■■□□ 2.65
COL11A2-204ENST00000395194 PLPPR3Q6T4P5 718 aa31.56■■■□□ 2.64
COL11A2-204ENST00000395194 MAGI2Q86UL8 1455 aa31.55■■■□□ 2.64
COL11A2-204ENST00000395194 EFCAB2Q5VUJ9 269 aa31.55■■■□□ 2.64
COL11A2-204ENST00000395194 CLIP1P30622 1438 aa31.55■■■□□ 2.64
COL11A2-204ENST00000395194 ARHGAP5Q13017 1502 aa31.54■■■□□ 2.64
COL11A2-204ENST00000395194 MLECQ14165 292 aa31.53■■■□□ 2.64
COL11A2-204ENST00000395194 FER1L4A9Z1Z3 1794 aa31.51■■■□□ 2.63
COL11A2-204ENST00000395194 CDC42BPBQ9Y5S2 1711 aa31.49■■■□□ 2.63
COL11A2-204ENST00000395194 CASKIN1Q8WXD9 1431 aa31.48■■■□□ 2.63
COL11A2-204ENST00000395194 LMTK3Q96Q04 1460 aa31.46■■■□□ 2.63
COL11A2-204ENST00000395194 CCDC18Q5T9S5 1454 aa31.45■■■□□ 2.62
COL11A2-204ENST00000395194 ATP10AO60312 1499 aa31.43■■■□□ 2.62
COL11A2-204ENST00000395194 PREX2Q70Z35 1606 aa31.42■■■□□ 2.62
COL11A2-204ENST00000395194 C9orf84Q5VXU9 1444 aa31.42■■■□□ 2.62
COL11A2-204ENST00000395194 ZNF518AQ6AHZ1 1483 aa31.42■■■□□ 2.62
COL11A2-204ENST00000395194 AFAP1Q8N556 730 aa31.4■■■□□ 2.62
COL11A2-204ENST00000395194 KDM5CP41229 1560 aa31.39■■■□□ 2.62
COL11A2-204ENST00000395194 MYT1LQ9UL68 1186 aa31.39■■■□□ 2.62
COL11A2-204ENST00000395194 FYCO1Q9BQS8 1478 aa31.37■■■□□ 2.61
COL11A2-204ENST00000395194 CDC42BPAQ5VT25 1732 aa31.36■■■□□ 2.61
COL11A2-204ENST00000395194 ARHGEF12Q9NZN5 1544 aa31.34■■■□□ 2.61
COL11A2-204ENST00000395194 HSPA2P54652 639 aa31.34■■■□□ 2.61
COL11A2-204ENST00000395194 ITSN2Q9NZM3 1697 aa31.34■■■□□ 2.61
COL11A2-204ENST00000395194 DIP2CQ9Y2E4 1556 aa31.33■■■□□ 2.61
COL11A2-204ENST00000395194 ABCC1P33527 1531 aa31.33■■■□□ 2.61
COL11A2-204ENST00000395194 ABCA6Q8N139 1617 aa31.31■■■□□ 2.6
COL11A2-204ENST00000395194 TRAPPC8Q9Y2L5 1435 aa31.29■■■□□ 2.6
COL11A2-204ENST00000395194 CEBPAP49715 358 aaPredicted RBP31.23■■■□□ 2.59
COL11A2-204ENST00000395194 MLH3Q9UHC1 1453 aa31.22■■■□□ 2.59
COL11A2-204ENST00000395194 ZNF777Q9ULD5 760 aaPredicted RBP31.21■■■□□ 2.59
COL11A2-204ENST00000395194 KIDINS220Q9ULH0 1771 aa31.2■■■□□ 2.59
COL11A2-204ENST00000395194 REREQ9P2R6 1566 aa31.2■■■□□ 2.58
COL11A2-204ENST00000395194 PREX1Q8TCU6 1659 aa31.19■■■□□ 2.58
COL11A2-204ENST00000395194 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
COL11A2-204ENST00000395194 SYCP2Q9BX26 1530 aa31.16■■■□□ 2.58
COL11A2-204ENST00000395194 GPATCH8Q9UKJ3 1502 aaKnown RBP31.15■■■□□ 2.58
COL11A2-204ENST00000395194 FBXO41Q8TF61 875 aa31.14■■■□□ 2.58
COL11A2-204ENST00000395194 C3P01024 1663 aa31.1■■■□□ 2.57
COL11A2-204ENST00000395194 AGLP35573 1532 aa31.09■■■□□ 2.57
COL11A2-204ENST00000395194 MTUS2Q5JR59 1369 aa31.08■■■□□ 2.57
COL11A2-204ENST00000395194 HNRNPMP52272 730 aaKnown RBP eCLIP31.08■■■□□ 2.57
COL11A2-204ENST00000395194 SETD1BQ9UPS6 1966 aaKnown RBP31.07■■■□□ 2.56
COL11A2-204ENST00000395194 CCNB3Q8WWL7 1395 aa31.05■■■□□ 2.56
COL11A2-204ENST00000395194 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
COL11A2-204ENST00000395194 ESF1Q9H501 851 aaKnown RBP31.04■■■□□ 2.56
COL11A2-204ENST00000395194 CFDP1Q9UEE9 299 aaPredicted RBP31.04■■■□□ 2.56
COL11A2-204ENST00000395194 SPAG9O60271 1321 aaKnown RBP31.02■■■□□ 2.56
COL11A2-204ENST00000395194 CEP162Q5TB80 1403 aa31.02■■■□□ 2.56
COL11A2-204ENST00000395194 UHRF1BP1Q6BDS2 1440 aa31.02■■■□□ 2.56
COL11A2-204ENST00000395194 ATP7AQ04656 1500 aa31■■■□□ 2.55
COL11A2-204ENST00000395194 TIAM1Q13009 1591 aa31■■■□□ 2.55
COL11A2-204ENST00000395194 EHBP1L1Q8N3D4 1523 aa30.98■■■□□ 2.55
COL11A2-204ENST00000395194 STRCQ7RTU9 1775 aa30.98■■■□□ 2.55
COL11A2-204ENST00000395194 INO80Q9ULG1 1556 aaPredicted RBP30.97■■■□□ 2.55
COL11A2-204ENST00000395194 PLEKHH2Q8IVE3 1493 aa30.97■■■□□ 2.55
COL11A2-204ENST00000395194 KIAA1107Q9UPP5 1409 aa30.96■■■□□ 2.55
COL11A2-204ENST00000395194 ZNF644Q9H582 1327 aaPredicted RBP30.92■■■□□ 2.54
COL11A2-204ENST00000395194 CNTLNQ9NXG0 1405 aa30.9■■■□□ 2.54
COL11A2-204ENST00000395194 PLXNC1O60486 1568 aa30.89■■■□□ 2.54
COL11A2-204ENST00000395194 MROH2AA6NES4 1674 aa30.89■■■□□ 2.54
COL11A2-204ENST00000395194 CLTCQ00610 1675 aaKnown RBP30.88■■■□□ 2.53
COL11A2-204ENST00000395194 A2MP01023 1474 aa30.88■■■□□ 2.53
COL11A2-204ENST00000395194 CERKQ8TCT0 537 aa30.87■■■□□ 2.53
COL11A2-204ENST00000395194 ADGBQ8N7X0 1667 aa30.85■■■□□ 2.53
COL11A2-204ENST00000395194 MBD5Q9P267 1494 aa30.81■■■□□ 2.52
COL11A2-204ENST00000395194 ZMYM3Q14202 1370 aa30.8■■■□□ 2.52
COL11A2-204ENST00000395194 GGT6Q6P531 493 aa30.8■■■□□ 2.52
COL11A2-204ENST00000395194 NCOA2Q15596 1464 aa30.8■■■□□ 2.52
COL11A2-204ENST00000395194 DMRT2Q9Y5R5 561 aa30.79■■■□□ 2.52
COL11A2-204ENST00000395194 LOC105371045A0A1W2PR82 267 aa30.76■■■□□ 2.51
COL11A2-204ENST00000395194 NPATQ14207 1427 aa30.75■■■□□ 2.51
COL11A2-204ENST00000395194 CAMSAP2Q08AD1 1489 aa30.74■■■□□ 2.51
COL11A2-204ENST00000395194 CAMSAP1Q5T5Y3 1602 aa30.72■■■□□ 2.51
COL11A2-204ENST00000395194 MYO3AQ8NEV4 1616 aa30.72■■■□□ 2.51
COL11A2-204ENST00000395194 NCOA1Q15788 1441 aa30.71■■■□□ 2.51
COL11A2-204ENST00000395194 PTPRTO14522 1441 aa30.7■■■□□ 2.5
COL11A2-204ENST00000395194 CCDC141Q6ZP82 1450 aa30.7■■■□□ 2.5
COL11A2-204ENST00000395194 RTEL1-TNFRSF6BF6WH68 1400 aa30.69■■■□□ 2.5
COL11A2-204ENST00000395194 VPS8Q8N3P4 1428 aa30.67■■■□□ 2.5
COL11A2-204ENST00000395194 ZNF142P52746 1687 aaPredicted RBP30.67■■■□□ 2.5
COL11A2-204ENST00000395194 PTPRKQ15262 1439 aa30.66■■■□□ 2.5
COL11A2-204ENST00000395194 DHX29Q7Z478 1369 aaKnown RBP30.64■■■□□ 2.5
COL11A2-204ENST00000395194 CEP170BQ9Y4F5 1589 aaPredicted RBP30.63■■■□□ 2.49
COL11A2-204ENST00000395194 LRRC9Q6ZRR7 1453 aa30.62■■■□□ 2.49
COL11A2-204ENST00000395194 KIF3BO15066 747 aa30.6■■■□□ 2.49
COL11A2-204ENST00000395194 NCKAP5LQ9HCH0 1330 aa30.59■■■□□ 2.49
COL11A2-204ENST00000395194 ARHGEF5Q12774 1597 aa30.58■■■□□ 2.49
COL11A2-204ENST00000395194 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
COL11A2-204ENST00000395194 PPP6R1Q9UPN7 881 aa30.57■■■□□ 2.48
COL11A2-204ENST00000395194 KANK4Q5T7N3 995 aaPredicted RBP30.53■■■□□ 2.48
COL11A2-204ENST00000395194 RSPH4AQ5TD94 716 aa30.53■■■□□ 2.48
COL11A2-204ENST00000395194 KDM5DQ9BY66 1539 aa30.52■■■□□ 2.48
COL11A2-204ENST00000395194 PLA2R1Q13018 1463 aa30.5■■■□□ 2.47
COL11A2-204ENST00000395194 TSPY4P0CV99 314 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms