RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 TROQ12816 1431 aaPredicted RBP10.53□□□□□ -0.72
SMARCAD1-203ENST00000394961 FYCO1Q9BQS8 1478 aa10.53□□□□□ -0.72
SMARCAD1-203ENST00000394961 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
SMARCAD1-203ENST00000394961 DIP2CQ9Y2E4 1556 aa10.53□□□□□ -0.72
SMARCAD1-203ENST00000394961 CASKIN1Q8WXD9 1431 aa10.53□□□□□ -0.72
SMARCAD1-203ENST00000394961 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
SMARCAD1-203ENST00000394961 LMTK3Q96Q04 1460 aa10.52□□□□□ -0.73
SMARCAD1-203ENST00000394961 C9orf84Q5VXU9 1444 aa10.52□□□□□ -0.73
SMARCAD1-203ENST00000394961 ZNF518AQ6AHZ1 1483 aa10.52□□□□□ -0.73
SMARCAD1-203ENST00000394961 FAM135AQ9P2D6 1515 aa10.52□□□□□ -0.73
SMARCAD1-203ENST00000394961 ATP10AO60312 1499 aa10.51□□□□□ -0.73
SMARCAD1-203ENST00000394961 ABCA6Q8N139 1617 aa10.5□□□□□ -0.73
SMARCAD1-203ENST00000394961 KIDINS220Q9ULH0 1771 aa10.49□□□□□ -0.73
SMARCAD1-203ENST00000394961 CLIP1P30622 1438 aa10.49□□□□□ -0.73
SMARCAD1-203ENST00000394961 INO80Q9ULG1 1556 aaPredicted RBP10.49□□□□□ -0.73
SMARCAD1-203ENST00000394961 ZNF142P52746 1687 aaPredicted RBP10.49□□□□□ -0.73
SMARCAD1-203ENST00000394961 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
SMARCAD1-203ENST00000394961 PLXNC1O60486 1568 aa10.48□□□□□ -0.73
SMARCAD1-203ENST00000394961 ADGBQ8N7X0 1667 aa10.48□□□□□ -0.73
SMARCAD1-203ENST00000394961 C3P01024 1663 aa10.47□□□□□ -0.73
SMARCAD1-203ENST00000394961 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
SMARCAD1-203ENST00000394961 TTBK1Q5TCY1 1321 aaPredicted RBP10.45□□□□□ -0.74
SMARCAD1-203ENST00000394961 STRCQ7RTU9 1775 aa10.44□□□□□ -0.74
SMARCAD1-203ENST00000394961 SETD1BQ9UPS6 1966 aaKnown RBP10.44□□□□□ -0.74
SMARCAD1-203ENST00000394961 SAMD9LQ8IVG5 1584 aa10.44□□□□□ -0.74
SMARCAD1-203ENST00000394961 PLEKHH2Q8IVE3 1493 aa10.44□□□□□ -0.74
SMARCAD1-203ENST00000394961 IQSEC2Q5JU85 1478 aa10.44□□□□□ -0.74
SMARCAD1-203ENST00000394961 SCAPERQ9BY12 1400 aa10.43□□□□□ -0.74
SMARCAD1-203ENST00000394961 YEATS2Q9ULM3 1422 aa10.43□□□□□ -0.74
SMARCAD1-203ENST00000394961 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
SMARCAD1-203ENST00000394961 KIAA1107Q9UPP5 1409 aa10.43□□□□□ -0.74
SMARCAD1-203ENST00000394961 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
SMARCAD1-203ENST00000394961 CNTLNQ9NXG0 1405 aa10.41□□□□□ -0.74
SMARCAD1-203ENST00000394961 EHBP1L1Q8N3D4 1523 aa10.41□□□□□ -0.74
SMARCAD1-203ENST00000394961 NPATQ14207 1427 aa10.39□□□□□ -0.75
SMARCAD1-203ENST00000394961 EFCAB2Q5VUJ9 269 aa10.39□□□□□ -0.75
SMARCAD1-203ENST00000394961 RAPGEF3O95398 923 aa10.39□□□□□ -0.75
SMARCAD1-203ENST00000394961 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
SMARCAD1-203ENST00000394961 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
SMARCAD1-203ENST00000394961 TIAM1Q13009 1591 aa10.38□□□□□ -0.75
SMARCAD1-203ENST00000394961 MAST1Q9Y2H9 1570 aa10.38□□□□□ -0.75
SMARCAD1-203ENST00000394961 ARHGEF5Q12774 1597 aa10.37□□□□□ -0.75
SMARCAD1-203ENST00000394961 CHIC1Q5VXU3 224 aa10.37□□□□□ -0.75
SMARCAD1-203ENST00000394961 PTPRTO14522 1441 aa10.37□□□□□ -0.75
SMARCAD1-203ENST00000394961 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
SMARCAD1-203ENST00000394961 GPATCH8Q9UKJ3 1502 aaKnown RBP10.37□□□□□ -0.75
SMARCAD1-203ENST00000394961 ZC3H13Q5T200 1668 aaKnown RBP10.36□□□□□ -0.75
SMARCAD1-203ENST00000394961 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
SMARCAD1-203ENST00000394961 EIF2AK4Q9P2K8 1649 aaKnown RBP10.36□□□□□ -0.75
SMARCAD1-203ENST00000394961 SUPT6HQ7KZ85 1726 aaKnown RBP10.35□□□□□ -0.75
SMARCAD1-203ENST00000394961 MYO3AQ8NEV4 1616 aa10.35□□□□□ -0.75
SMARCAD1-203ENST00000394961 CEP162Q5TB80 1403 aa10.35□□□□□ -0.75
SMARCAD1-203ENST00000394961 RNF17Q9BXT8 1623 aaKnown RBP10.34□□□□□ -0.75
SMARCAD1-203ENST00000394961 SYCP2Q9BX26 1530 aa10.33□□□□□ -0.76
SMARCAD1-203ENST00000394961 FBXO41Q8TF61 875 aa10.33□□□□□ -0.76
SMARCAD1-203ENST00000394961 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
SMARCAD1-203ENST00000394961 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
SMARCAD1-203ENST00000394961 CLTCQ00610 1675 aaKnown RBP10.32□□□□□ -0.76
SMARCAD1-203ENST00000394961 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
SMARCAD1-203ENST00000394961 TRAPPC8Q9Y2L5 1435 aa10.32□□□□□ -0.76
SMARCAD1-203ENST00000394961 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
SMARCAD1-203ENST00000394961 LTBP4Q8N2S1 1624 aa10.3□□□□□ -0.76
SMARCAD1-203ENST00000394961 CROCC2H7BZ55 1655 aa10.3□□□□□ -0.76
SMARCAD1-203ENST00000394961 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
SMARCAD1-203ENST00000394961 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
SMARCAD1-203ENST00000394961 KDM5AP29375 1690 aaKnown RBP10.29□□□□□ -0.76
SMARCAD1-203ENST00000394961 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
SMARCAD1-203ENST00000394961 DEPDC5O75140 1603 aa10.28□□□□□ -0.76
SMARCAD1-203ENST00000394961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
SMARCAD1-203ENST00000394961 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
SMARCAD1-203ENST00000394961 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
SMARCAD1-203ENST00000394961 A2MP01023 1474 aa10.27□□□□□ -0.76
SMARCAD1-203ENST00000394961 CEP170BQ9Y4F5 1589 aaPredicted RBP10.27□□□□□ -0.77
SMARCAD1-203ENST00000394961 TCOF1Q13428 1488 aaKnown RBP10.26□□□□□ -0.77
SMARCAD1-203ENST00000394961 UBTFP17480 764 aaKnown RBP10.25□□□□□ -0.77
SMARCAD1-203ENST00000394961 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
SMARCAD1-203ENST00000394961 PTPRKQ15262 1439 aa10.24□□□□□ -0.77
SMARCAD1-203ENST00000394961 DMRT2Q9Y5R5 561 aa10.24□□□□□ -0.77
SMARCAD1-203ENST00000394961 CCDC141Q6ZP82 1450 aa10.24□□□□□ -0.77
SMARCAD1-203ENST00000394961 DNMT1P26358 1616 aaKnown RBP10.23□□□□□ -0.77
SMARCAD1-203ENST00000394961 ARID4BQ4LE39 1312 aaPredicted RBP10.23□□□□□ -0.77
SMARCAD1-203ENST00000394961 CAMSAP2Q08AD1 1489 aa10.23□□□□□ -0.77
SMARCAD1-203ENST00000394961 CAMSAP1Q5T5Y3 1602 aa10.22□□□□□ -0.77
SMARCAD1-203ENST00000394961 MROH1Q8NDA8 1641 aa10.22□□□□□ -0.77
SMARCAD1-203ENST00000394961 A2ML1A8K2U0 1454 aa10.22□□□□□ -0.77
SMARCAD1-203ENST00000394961 SHANK2Q9UPX8 1470 aa10.22□□□□□ -0.77
SMARCAD1-203ENST00000394961 PZPP20742 1482 aa10.22□□□□□ -0.77
SMARCAD1-203ENST00000394961 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.77
SMARCAD1-203ENST00000394961 SPATA31D1Q6ZQQ2 1576 aa10.21□□□□□ -0.77
SMARCAD1-203ENST00000394961 CCNB3Q8WWL7 1395 aa10.21□□□□□ -0.78
SMARCAD1-203ENST00000394961 NEURL4Q96JN8 1562 aa10.2□□□□□ -0.78
SMARCAD1-203ENST00000394961 MIA2Q96PC5 1412 aa10.2□□□□□ -0.78
SMARCAD1-203ENST00000394961 SYNMO15061 1565 aa10.2□□□□□ -0.78
SMARCAD1-203ENST00000394961 NCOA2Q15596 1464 aa10.2□□□□□ -0.78
SMARCAD1-203ENST00000394961 MED14O60244 1454 aa10.19□□□□□ -0.78
SMARCAD1-203ENST00000394961 DHX29Q7Z478 1369 aaKnown RBP10.19□□□□□ -0.78
SMARCAD1-203ENST00000394961 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
SMARCAD1-203ENST00000394961 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
SMARCAD1-203ENST00000394961 NLRP1Q9C000 1473 aa10.18□□□□□ -0.78
SMARCAD1-203ENST00000394961 CPS1P31327 1500 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms