RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
CASC3-202ENST00000394114 CEP170Q5SW79 1584 aa8.87□□□□□ -0.99
CASC3-202ENST00000394114 TIAM1Q13009 1591 aa8.86□□□□□ -0.99
CASC3-202ENST00000394114 ARID3CA6NKF2 412 aa8.86□□□□□ -0.99
CASC3-202ENST00000394114 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
CASC3-202ENST00000394114 FMN1Q68DA7 1419 aa8.85□□□□□ -0.99
CASC3-202ENST00000394114 KIAA0586Q9BVV6 1533 aa8.85□□□□□ -0.99
CASC3-202ENST00000394114 STAG3Q9UJ98 1225 aa8.85□□□□□ -0.99
CASC3-202ENST00000394114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.85□□□□□ -0.99
CASC3-202ENST00000394114 LMOD2Q6P5Q4 547 aa8.84□□□□□ -0.99
CASC3-202ENST00000394114 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
CASC3-202ENST00000394114 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
CASC3-202ENST00000394114 FYCO1Q9BQS8 1478 aa8.84□□□□□ -0.99
CASC3-202ENST00000394114 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
CASC3-202ENST00000394114 CHD1O14646 1710 aa8.83□□□□□ -1
CASC3-202ENST00000394114 UGGT2Q9NYU1 1516 aa8.83□□□□□ -1
CASC3-202ENST00000394114 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
CASC3-202ENST00000394114 CFAP43Q8NDM7 1665 aa8.82□□□□□ -1
CASC3-202ENST00000394114 DCAF8L1A6NGE4 600 aa8.82□□□□□ -1
CASC3-202ENST00000394114 LRRC9Q6ZRR7 1453 aa8.82□□□□□ -1
CASC3-202ENST00000394114 DISP1Q96F81 1524 aa8.82□□□□□ -1
CASC3-202ENST00000394114 NUP160Q12769 1436 aa8.81□□□□□ -1
CASC3-202ENST00000394114 KIAA0556O60303 1618 aa8.81□□□□□ -1
CASC3-202ENST00000394114 JPH4Q96JJ6 628 aa8.81□□□□□ -1
CASC3-202ENST00000394114 ITGAEP38570 1179 aa8.8□□□□□ -1
CASC3-202ENST00000394114 MAP3K1Q13233 1512 aa8.79□□□□□ -1
CASC3-202ENST00000394114 CCER1Q8TC90 406 aaPredicted RBP8.78□□□□□ -1
CASC3-202ENST00000394114 RNF25Q96BH1 459 aaPredicted RBP8.78□□□□□ -1
CASC3-202ENST00000394114 MTUS2Q5JR59 1369 aa8.78□□□□□ -1
CASC3-202ENST00000394114 PHLDB1Q86UU1 1377 aa8.78□□□□□ -1
CASC3-202ENST00000394114 CDK13Q14004 1512 aaKnown RBP8.77□□□□□ -1
CASC3-202ENST00000394114 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
CASC3-202ENST00000394114 HECW1Q76N89 1606 aa8.76□□□□□ -1.01
CASC3-202ENST00000394114 CCNB3Q8WWL7 1395 aa8.76□□□□□ -1.01
CASC3-202ENST00000394114 TRHP20396 242 aaPredicted RBP8.76□□□□□ -1.01
CASC3-202ENST00000394114 FAM50AQ14320 339 aaKnown RBP8.76□□□□□ -1.01
CASC3-202ENST00000394114 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
CASC3-202ENST00000394114 RRBP1Q9P2E9 1410 aaKnown RBP8.75□□□□□ -1.01
CASC3-202ENST00000394114 EPRSP07814 1512 aaKnown RBP8.75□□□□□ -1.01
CASC3-202ENST00000394114 PLB1Q6P1J6 1458 aa8.75□□□□□ -1.01
CASC3-202ENST00000394114 MIER1Q8N108 512 aa8.75□□□□□ -1.01
CASC3-202ENST00000394114 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
CASC3-202ENST00000394114 PRG4Q92954 1404 aaPredicted RBP8.74□□□□□ -1.01
CASC3-202ENST00000394114 RAPGEF6Q8TEU7 1601 aa8.73□□□□□ -1.01
CASC3-202ENST00000394114 NUP153P49790 1475 aaKnown RBP8.73□□□□□ -1.01
CASC3-202ENST00000394114 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
CASC3-202ENST00000394114 NCOA2Q15596 1464 aa8.72□□□□□ -1.01
CASC3-202ENST00000394114 EHBP1L1Q8N3D4 1523 aa8.71□□□□□ -1.01
CASC3-202ENST00000394114 ZMYND15Q9H091 742 aa8.71□□□□□ -1.01
CASC3-202ENST00000394114 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.01
CASC3-202ENST00000394114 SUPT6HQ7KZ85 1726 aaKnown RBP8.71□□□□□ -1.02
CASC3-202ENST00000394114 POLA2Q14181 598 aa8.7□□□□□ -1.02
CASC3-202ENST00000394114 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
CASC3-202ENST00000394114 ZC3H15Q8WU90 426 aaKnown RBP8.7□□□□□ -1.02
CASC3-202ENST00000394114 PTPRGP23470 1445 aa8.69□□□□□ -1.02
CASC3-202ENST00000394114 ZEB1P37275 1124 aaPredicted RBP8.69□□□□□ -1.02
CASC3-202ENST00000394114 RSPH6AQ9H0K4 717 aa8.69□□□□□ -1.02
CASC3-202ENST00000394114 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
CASC3-202ENST00000394114 FGD6Q6ZV73 1430 aa8.69□□□□□ -1.02
CASC3-202ENST00000394114 SHROOM2Q13796 1616 aa8.68□□□□□ -1.02
CASC3-202ENST00000394114 MYOM3Q5VTT5 1437 aa8.67□□□□□ -1.02
CASC3-202ENST00000394114 CLASP1Q7Z460 1538 aa8.67□□□□□ -1.02
CASC3-202ENST00000394114 SLC24A3Q9HC58 644 aa8.67□□□□□ -1.02
CASC3-202ENST00000394114 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
CASC3-202ENST00000394114 ABCA8O94911 1581 aa8.66□□□□□ -1.02
CASC3-202ENST00000394114 RIOK3O14730 519 aaKnown RBP8.65□□□□□ -1.02
CASC3-202ENST00000394114 ARHGEF11O15085 1522 aa8.64□□□□□ -1.03
CASC3-202ENST00000394114 ATP10BO94823 1461 aa8.64□□□□□ -1.03
CASC3-202ENST00000394114 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
CASC3-202ENST00000394114 KIF14Q15058 1648 aa8.64□□□□□ -1.03
CASC3-202ENST00000394114 PTPN23Q9H3S7 1636 aa8.64□□□□□ -1.03
CASC3-202ENST00000394114 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
CASC3-202ENST00000394114 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
CASC3-202ENST00000394114 PLEKHD1A6NEE1 506 aa8.62□□□□□ -1.03
CASC3-202ENST00000394114 STK25O00506 426 aa8.62□□□□□ -1.03
CASC3-202ENST00000394114 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
CASC3-202ENST00000394114 ZNF644Q9H582 1327 aaPredicted RBP8.62□□□□□ -1.03
CASC3-202ENST00000394114 OSCARQ8IYS5 282 aa8.62□□□□□ -1.03
CASC3-202ENST00000394114 PTPRKQ15262 1439 aa8.62□□□□□ -1.03
CASC3-202ENST00000394114 UACAQ9BZF9 1416 aa8.62□□□□□ -1.03
CASC3-202ENST00000394114 ZNF777Q9ULD5 760 aaPredicted RBP8.61□□□□□ -1.03
CASC3-202ENST00000394114 SETD5Q9C0A6 1442 aa8.6□□□□□ -1.03
CASC3-202ENST00000394114 DHX57Q6P158 1386 aaKnown RBP8.6□□□□□ -1.03
CASC3-202ENST00000394114 GSE1Q14687 1217 aa8.6□□□□□ -1.03
CASC3-202ENST00000394114 ZBTB12Q9Y330 459 aaPredicted RBP8.6□□□□□ -1.03
CASC3-202ENST00000394114 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
CASC3-202ENST00000394114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.59□□□□□ -1.03
CASC3-202ENST00000394114 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
CASC3-202ENST00000394114 CCDC9Q9Y3X0 531 aaKnown RBP8.59□□□□□ -1.03
CASC3-202ENST00000394114 RRP7BPQ9NSQ0 103 aa8.59□□□□□ -1.03
CASC3-202ENST00000394114 CFDP1Q9UEE9 299 aaPredicted RBP8.59□□□□□ -1.03
CASC3-202ENST00000394114 ABCC2Q92887 1545 aa8.58□□□□□ -1.04
CASC3-202ENST00000394114 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
CASC3-202ENST00000394114 ZNF692Q9BU19 519 aaPredicted RBP8.58□□□□□ -1.04
CASC3-202ENST00000394114 WDR70Q9NW82 654 aa8.58□□□□□ -1.04
CASC3-202ENST00000394114 ARID3AQ99856 593 aa8.57□□□□□ -1.04
CASC3-202ENST00000394114 MIA2Q96PC5 1412 aa8.57□□□□□ -1.04
CASC3-202ENST00000394114 TCOF1Q13428 1488 aaKnown RBP8.57□□□□□ -1.04
CASC3-202ENST00000394114 GPATCH8Q9UKJ3 1502 aaKnown RBP8.57□□□□□ -1.04
CASC3-202ENST00000394114 ADCY10Q96PN6 1610 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms