RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
NPM1-203ENST00000393820 SHROOM4Q9ULL8 1493 aa10.01□□□□□ -0.81
NPM1-203ENST00000393820 UNC13AQ9UPW8 1703 aa10.01□□□□□ -0.81
NPM1-203ENST00000393820 DCAF1Q9Y4B6 1507 aa10.01□□□□□ -0.81
NPM1-203ENST00000393820 G3V3G9 751 aa10.01□□□□□ -0.81
NPM1-203ENST00000393820 PSEN1P49768 467 aa10.01□□□□□ -0.81
NPM1-203ENST00000393820 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
NPM1-203ENST00000393820 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
NPM1-203ENST00000393820 HOXB3P14651 431 aaPredicted RBP10□□□□□ -0.81
NPM1-203ENST00000393820 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
NPM1-203ENST00000393820 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
NPM1-203ENST00000393820 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
NPM1-203ENST00000393820 ILDR1Q86SU0 546 aaPredicted RBP9.99□□□□□ -0.81
NPM1-203ENST00000393820 CFAP44Q96MT7 982 aa9.99□□□□□ -0.81
NPM1-203ENST00000393820 ERBB3P21860 1342 aa9.99□□□□□ -0.81
NPM1-203ENST00000393820 DOK7Q18PE1 504 aa9.97□□□□□ -0.81
NPM1-203ENST00000393820 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
NPM1-203ENST00000393820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
NPM1-203ENST00000393820 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
NPM1-203ENST00000393820 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
NPM1-203ENST00000393820 ZCCHC6Q5VYS8 1495 aaKnown RBP9.94□□□□□ -0.82
NPM1-203ENST00000393820 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
NPM1-203ENST00000393820 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
NPM1-203ENST00000393820 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
NPM1-203ENST00000393820 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
NPM1-203ENST00000393820 STK25O00506 426 aa9.92□□□□□ -0.82
NPM1-203ENST00000393820 TSHZ2Q9NRE2 1034 aa9.92□□□□□ -0.82
NPM1-203ENST00000393820 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
NPM1-203ENST00000393820 HS6ST3Q8IZP7 471 aa9.89□□□□□ -0.83
NPM1-203ENST00000393820 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
NPM1-203ENST00000393820 STK24Q9Y6E0 443 aa9.89□□□□□ -0.83
NPM1-203ENST00000393820 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
NPM1-203ENST00000393820 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
NPM1-203ENST00000393820 PTGER2P43116 358 aa9.86□□□□□ -0.83
NPM1-203ENST00000393820 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
NPM1-203ENST00000393820 ZNF687Q8N1G0 1237 aa9.84□□□□□ -0.83
NPM1-203ENST00000393820 DNAJC5Q9H3Z4 198 aa9.84□□□□□ -0.83
NPM1-203ENST00000393820 ZSWIM6Q9HCJ5 1215 aa9.83□□□□□ -0.84
NPM1-203ENST00000393820 CECR2Q9BXF3 1484 aa9.8□□□□□ -0.84
NPM1-203ENST00000393820 CC2D2AQ9P2K1 1620 aa9.79□□□□□ -0.84
NPM1-203ENST00000393820 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
NPM1-203ENST00000393820 SCRIBQ14160 1630 aa9.77□□□□□ -0.85
NPM1-203ENST00000393820 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
NPM1-203ENST00000393820 NBR1Q14596 966 aa9.74□□□□□ -0.85
NPM1-203ENST00000393820 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
NPM1-203ENST00000393820 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
NPM1-203ENST00000393820 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
NPM1-203ENST00000393820 MFRPQ9BY79 579 aa9.71□□□□□ -0.86
NPM1-203ENST00000393820 MICALL2Q8IY33 904 aa9.7□□□□□ -0.86
NPM1-203ENST00000393820 TMEM92Q6UXU6 159 aa9.69□□□□□ -0.86
NPM1-203ENST00000393820 PHF8Q9UPP1 1060 aa9.68□□□□□ -0.86
NPM1-203ENST00000393820 LSM11P83369 360 aaKnown RBP eCLIP9.66□□□□□ -0.866e-8■■■■■ 28.5
NPM1-203ENST00000393820 ARSIQ5FYB1 569 aa9.65□□□□□ -0.86
NPM1-203ENST00000393820 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
NPM1-203ENST00000393820 PPP1R37O75864 691 aa9.63□□□□□ -0.87
NPM1-203ENST00000393820 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
NPM1-203ENST00000393820 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
NPM1-203ENST00000393820 SOX12O15370 315 aa9.62□□□□□ -0.87
NPM1-203ENST00000393820 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
NPM1-203ENST00000393820 PBX2P40425 430 aa9.59□□□□□ -0.87
NPM1-203ENST00000393820 NLRP6P59044 892 aa9.59□□□□□ -0.87
NPM1-203ENST00000393820 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
NPM1-203ENST00000393820 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
NPM1-203ENST00000393820 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.886e-7■■■■■ 29.5
NPM1-203ENST00000393820 RYDENQ9NUL5 291 aaKnown RBP9.55□□□□□ -0.88
NPM1-203ENST00000393820 CADPS2Q86UW7 1296 aa9.54□□□□□ -0.88
NPM1-203ENST00000393820 NCAPD3P42695 1498 aa9.51□□□□□ -0.89
NPM1-203ENST00000393820 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
NPM1-203ENST00000393820 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
NPM1-203ENST00000393820 NUDT7P0C024 238 aa9.46□□□□□ -0.89
NPM1-203ENST00000393820 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.89
NPM1-203ENST00000393820 CUX2O14529 1486 aa9.46□□□□□ -0.89
NPM1-203ENST00000393820 POTEEQ6S8J3 1075 aa9.46□□□□□ -0.9
NPM1-203ENST00000393820 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
NPM1-203ENST00000393820 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
NPM1-203ENST00000393820 SMARCA2P51531 1590 aa9.43□□□□□ -0.9
NPM1-203ENST00000393820 ATAD2BQ9ULI0 1458 aa9.43□□□□□ -0.9
NPM1-203ENST00000393820 HMGXB3Q12766 1538 aa9.42□□□□□ -0.9
NPM1-203ENST00000393820 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
NPM1-203ENST00000393820 SLC34A2O95436 690 aa9.4□□□□□ -0.9
NPM1-203ENST00000393820 PCDHGA4Q9Y5G9 962 aa9.4□□□□□ -0.9
NPM1-203ENST00000393820 ERCC6Q03468 1493 aa9.4□□□□□ -0.91
NPM1-203ENST00000393820 KIF3CO14782 793 aa9.39□□□□□ -0.91
NPM1-203ENST00000393820 TMEM132AQ24JP5 1023 aa9.39□□□□□ -0.91
NPM1-203ENST00000393820 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
NPM1-203ENST00000393820 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
NPM1-203ENST00000393820 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
NPM1-203ENST00000393820 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
NPM1-203ENST00000393820 SMARCA4P51532 1647 aa9.38□□□□□ -0.91
NPM1-203ENST00000393820 TK2O00142 265 aa9.37□□□□□ -0.91
NPM1-203ENST00000393820 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
NPM1-203ENST00000393820 RGS20O76081 388 aa9.36□□□□□ -0.91
NPM1-203ENST00000393820 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
NPM1-203ENST00000393820 LARP6Q9BRS8 491 aaKnown RBP9.35□□□□□ -0.91
NPM1-203ENST00000393820 PEG3Q9GZU2 1588 aa9.34□□□□□ -0.91
NPM1-203ENST00000393820 HRO43593 1189 aa9.33□□□□□ -0.92
NPM1-203ENST00000393820 KCNV2Q8TDN2 545 aa9.33□□□□□ -0.92
NPM1-203ENST00000393820 STAC3Q96MF2 364 aa9.33□□□□□ -0.92
NPM1-203ENST00000393820 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
NPM1-203ENST00000393820 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms