RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 KHSRPQ92945 711 aaKnown RBP eCLIP8.08□□□□□ -1.12
PCNPP3-201ENST00000393579 HCSTQ9UBK5 93 aa8.07□□□□□ -1.12
PCNPP3-201ENST00000393579 AXIN2Q9Y2T1 843 aa8.03□□□□□ -1.12
PCNPP3-201ENST00000393579 SPOCK2Q92563 424 aa8.02□□□□□ -1.13
PCNPP3-201ENST00000393579 PBX2P40425 430 aa8.01□□□□□ -1.13
PCNPP3-201ENST00000393579 NUDT7P0C024 238 aa7.99□□□□□ -1.13
PCNPP3-201ENST00000393579 SOX12O15370 315 aa7.95□□□□□ -1.14
PCNPP3-201ENST00000393579 MS4A4AQ96JQ5 239 aa7.95□□□□□ -1.14
PCNPP3-201ENST00000393579 LHX6Q9UPM6 363 aa7.95□□□□□ -1.14
PCNPP3-201ENST00000393579 PHF8Q9UPP1 1060 aa7.95□□□□□ -1.14
PCNPP3-201ENST00000393579 ADGRD1Q6QNK2 874 aa7.94□□□□□ -1.14
PCNPP3-201ENST00000393579 POTEEQ6S8J3 1075 aa7.92□□□□□ -1.14
PCNPP3-201ENST00000393579 KCTD12Q96CX2 325 aaKnown RBP7.92□□□□□ -1.14
PCNPP3-201ENST00000393579 STAC3Q96MF2 364 aa7.92□□□□□ -1.14
PCNPP3-201ENST00000393579 IRX2Q9BZI1 471 aaPredicted RBP7.92□□□□□ -1.14
PCNPP3-201ENST00000393579 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
PCNPP3-201ENST00000393579 IFNLR1Q8IU57 520 aaPredicted RBP7.89□□□□□ -1.15
PCNPP3-201ENST00000393579 TRIM41Q8WV44 630 aa7.88□□□□□ -1.15
PCNPP3-201ENST00000393579 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.87□□□□□ -1.15
PCNPP3-201ENST00000393579 ZFP91Q96JP5 570 aaPredicted RBP7.87□□□□□ -1.15
PCNPP3-201ENST00000393579 PCDHGA4Q9Y5G9 962 aa7.87□□□□□ -1.15
PCNPP3-201ENST00000393579 C2orf72A6NCS6 295 aa7.85□□□□□ -1.15
PCNPP3-201ENST00000393579 RIOK3O14730 519 aaKnown RBP7.85□□□□□ -1.15
PCNPP3-201ENST00000393579 PTPN5P54829 565 aa7.85□□□□□ -1.15
PCNPP3-201ENST00000393579 NLRP6P59044 892 aa7.85□□□□□ -1.15
PCNPP3-201ENST00000393579 PSEN2P49810 448 aa7.83□□□□□ -1.16
PCNPP3-201ENST00000393579 PSDA5PKW4 1024 aaPredicted RBP7.82□□□□□ -1.16
PCNPP3-201ENST00000393579 DMRTA1Q5VZB9 504 aa7.82□□□□□ -1.16
PCNPP3-201ENST00000393579 TK2O00142 265 aa7.81□□□□□ -1.16
PCNPP3-201ENST00000393579 VGFO15240 615 aaPredicted RBP7.81□□□□□ -1.16
PCNPP3-201ENST00000393579 RGS20O76081 388 aa7.8□□□□□ -1.16
PCNPP3-201ENST00000393579 TMC2Q8TDI7 906 aa7.8□□□□□ -1.16
PCNPP3-201ENST00000393579 HRO43593 1189 aa7.79□□□□□ -1.16
PCNPP3-201ENST00000393579 KIF3CO14782 793 aa7.78□□□□□ -1.16
PCNPP3-201ENST00000393579 KCNH8Q96L42 1107 aa7.78□□□□□ -1.16
PCNPP3-201ENST00000393579 Q6ZNB5 142 aa7.77□□□□□ -1.17
PCNPP3-201ENST00000393579 SLC34A2O95436 690 aa7.76□□□□□ -1.17
PCNPP3-201ENST00000393579 RNF25Q96BH1 459 aaPredicted RBP7.76□□□□□ -1.17
PCNPP3-201ENST00000393579 PPP4R3BQ5MIZ7 849 aa7.75□□□□□ -1.17
PCNPP3-201ENST00000393579 FBXO22Q8NEZ5 403 aa7.75□□□□□ -1.17
PCNPP3-201ENST00000393579 KCNK17Q96T54 332 aa7.75□□□□□ -1.17
PCNPP3-201ENST00000393579 A0A0G2JS52 829 aa7.74□□□□□ -1.17
PCNPP3-201ENST00000393579 BCL11BQ9C0K0 894 aaPredicted RBP7.74□□□□□ -1.17
PCNPP3-201ENST00000393579 STK24Q9Y6E0 443 aa7.74□□□□□ -1.17
PCNPP3-201ENST00000393579 GOLGA8CPA6NN73 597 aa7.72□□□□□ -1.17
PCNPP3-201ENST00000393579 MFRPQ9BY79 579 aa7.7□□□□□ -1.18
PCNPP3-201ENST00000393579 TAOK2Q9UL54 1235 aa7.69□□□□□ -1.18
PCNPP3-201ENST00000393579 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
PCNPP3-201ENST00000393579 THSD4Q6ZMP0 1018 aa7.67□□□□□ -1.18
PCNPP3-201ENST00000393579 VPS9D1Q9Y2B5 631 aa7.67□□□□□ -1.18
PCNPP3-201ENST00000393579 STK25O00506 426 aa7.66□□□□□ -1.18
PCNPP3-201ENST00000393579 WNT2BQ93097 391 aa7.66□□□□□ -1.18
PCNPP3-201ENST00000393579 TBC1D12O60347 775 aa7.63□□□□□ -1.19
PCNPP3-201ENST00000393579 PTCD2Q8WV60 388 aaKnown RBP7.63□□□□□ -1.19
PCNPP3-201ENST00000393579 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
PCNPP3-201ENST00000393579 MRPL50Q8N5N7 158 aaKnown RBP7.62□□□□□ -1.19
PCNPP3-201ENST00000393579 PLPP6Q8IY26 295 aa7.6□□□□□ -1.19
PCNPP3-201ENST00000393579 ZNF454Q8N9F8 522 aa7.6□□□□□ -1.19
PCNPP3-201ENST00000393579 NBPF3Q9H094 633 aa7.56□□□□□ -1.2
PCNPP3-201ENST00000393579 PTPREP23469 700 aa7.55□□□□□ -1.2
PCNPP3-201ENST00000393579 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
PCNPP3-201ENST00000393579 PPP1R37O75864 691 aa7.54□□□□□ -1.2
PCNPP3-201ENST00000393579 FOXK1P85037 733 aa7.54□□□□□ -1.2
PCNPP3-201ENST00000393579 UPF1Q92900 1129 aaKnown RBP eCLIP7.54□□□□□ -1.2
PCNPP3-201ENST00000393579 SLC4A5Q9BY07 1137 aa7.53□□□□□ -1.2
PCNPP3-201ENST00000393579 BCL2L12Q9HB09 334 aa7.53□□□□□ -1.2
PCNPP3-201ENST00000393579 LAPTM4AQ15012 233 aa7.52□□□□□ -1.21
PCNPP3-201ENST00000393579 TRAF7Q6Q0C0 670 aa7.52□□□□□ -1.21
PCNPP3-201ENST00000393579 DSG2Q14126 1118 aa7.51□□□□□ -1.21
PCNPP3-201ENST00000393579 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
PCNPP3-201ENST00000393579 ZBED2Q9BTP6 218 aa7.51□□□□□ -1.21
PCNPP3-201ENST00000393579 GFRA3O60609 400 aa7.5□□□□□ -1.21
PCNPP3-201ENST00000393579 ITGBL1O95965 494 aaPredicted RBP7.5□□□□□ -1.21
PCNPP3-201ENST00000393579 GPHNQ9NQX3 736 aaPredicted RBP7.49□□□□□ -1.21
PCNPP3-201ENST00000393579 BCAMP50895 628 aa7.48□□□□□ -1.21
PCNPP3-201ENST00000393579 KCNC4Q03721 635 aa7.47□□□□□ -1.21
PCNPP3-201ENST00000393579 LCE2BO14633 110 aa7.45□□□□□ -1.22
PCNPP3-201ENST00000393579 ECM2O94769 699 aaPredicted RBP7.45□□□□□ -1.22
PCNPP3-201ENST00000393579 FOSBP53539 338 aa7.44□□□□□ -1.22
PCNPP3-201ENST00000393579 ZNF787Q6DD87 383 aa7.43□□□□□ -1.22
PCNPP3-201ENST00000393579 OXER1Q8TDS5 423 aa7.43□□□□□ -1.22
PCNPP3-201ENST00000393579 ZDHHC16Q969W1 377 aa7.42□□□□□ -1.22
PCNPP3-201ENST00000393579 ADAM33Q9BZ11 813 aa7.42□□□□□ -1.22
PCNPP3-201ENST00000393579 SOWAHBA6NEL2 793 aa7.4□□□□□ -1.22
PCNPP3-201ENST00000393579 PROX2Q3B8N5 592 aa7.4□□□□□ -1.22
PCNPP3-201ENST00000393579 NYAP1Q6ZVC0 841 aa7.4□□□□□ -1.22
PCNPP3-201ENST00000393579 JPH4Q96JJ6 628 aa7.4□□□□□ -1.22
PCNPP3-201ENST00000393579 WBP1LQ9NX94 342 aa7.4□□□□□ -1.22
PCNPP3-201ENST00000393579 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
PCNPP3-201ENST00000393579 NRG2O14511 850 aaPredicted RBP7.38□□□□□ -1.23
PCNPP3-201ENST00000393579 PPP1R3GB7ZBB8 358 aa7.37□□□□□ -1.23
PCNPP3-201ENST00000393579 RGL2O15211 777 aa7.37□□□□□ -1.23
PCNPP3-201ENST00000393579 PRKD2Q9BZL6 878 aa7.37□□□□□ -1.23
PCNPP3-201ENST00000393579 EVI5O60447 810 aa7.36□□□□□ -1.23
PCNPP3-201ENST00000393579 ZNF775Q96BV0 537 aaPredicted RBP7.36□□□□□ -1.23
PCNPP3-201ENST00000393579 ZFRQ96KR1 1074 aaKnown RBP7.36□□□□□ -1.23
PCNPP3-201ENST00000393579 SEPT9Q9UHD8 586 aaPredicted RBP7.35□□□□□ -1.23
PCNPP3-201ENST00000393579 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
PCNPP3-201ENST00000393579 LAPTM4BQ86VI4 370 aa7.34□□□□□ -1.23
PCNPP3-201ENST00000393579 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms